RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 CFAP45Q9UL16 551 aa13.86□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 ITGB4P16144 1822 aa13.86□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 CDHR2Q9BYE9 1310 aa13.85□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 SALL1Q9NSC2 1324 aa13.85□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 A0A087WWV3 80 aa13.85□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 KLF18A0A0U1RQI7 1052 aa13.85□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 PDE8BO95263 885 aa13.85□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 ADAMTS2O95450 1211 aa13.85□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 LRRFIP1Q32MZ4 808 aaKnown RBP13.85□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 ZNF213O14771 459 aa13.85□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 CCDC102BQ68D86 513 aa13.85□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 NAA16Q6N069 864 aaPredicted RBP13.85□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 FAM200AQ8TCP9 573 aa13.85□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 CLSTN2Q9H4D0 955 aa13.85□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 INCENPQ9NQS7 918 aa13.85□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 MB21D2Q8IYB1 491 aaPredicted RBP13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 NBPF3Q9H094 633 aa13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 DDX19AQ9NUU7 478 aaKnown RBP13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 WWC3Q9ULE0 1092 aa13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 CARMIL3Q8ND23 1372 aa13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 GOLGA8BA8MQT2 603 aa13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 PDE8AO60658 829 aa13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 POLR3DP05423 398 aaPredicted RBP13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 RXRAP19793 462 aa13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 ADD2P35612 726 aa13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 ERCC4Q92889 916 aaPredicted RBP13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 DNAJC25Q9H1X3 360 aa13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 GOLPH3LQ9H4A5 285 aa13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 CBX8Q9HC52 389 aa13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 SEC31BQ9NQW1 1179 aa13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 HPS5Q9UPZ3 1129 aa13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 KIAA2012Q0VF49 1180 aa13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 SUSD4Q5VX71 490 aa13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 RALYLQ86SE5 291 aaKnown RBP13.84□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 ZNF532Q9HCE3 1301 aa13.83□□□□□ -0.19
HMGN3-AS1-201ENST00000604516 NWD2Q9ULI1 1742 aa13.83□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 TICAM2Q86XR7 235 aa13.83□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 CCAR1Q8IX12 1150 aaKnown RBP13.83□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 NCOA7Q8NI08 942 aa13.83□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.83□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 RCOR1Q9UKL0 485 aa13.83□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 TBC1D10CQ8IV04 446 aa13.83□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 SENP2Q9HC62 589 aa13.83□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 DISP2A7MBM2 1401 aa13.83□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 MYO5AQ9Y4I1 1855 aaKnown RBP13.82□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 IL6STP40189 918 aaPredicted RBP13.82□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 ME1P48163 572 aa13.82□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 ZNF34Q8IZ26 560 aa13.82□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 AKAP11Q9UKA4 1901 aa13.82□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 EVCP57679 992 aa13.82□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 SASS6Q6UVJ0 657 aa13.82□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 ORC3Q9UBD5 711 aaPredicted RBP13.82□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 KIF3AQ9Y496 699 aa13.82□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 PDE6AP16499 860 aa13.81□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 ATP6V1AP38606 617 aa13.81□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 RBM43Q6ZSC3 357 aaKnown RBP13.81□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 CYB5R4Q7L1T6 521 aa13.81□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 CCDC144CPQ8IYA2 1237 aa13.81□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 AIFM3Q96NN9 605 aa13.81□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.81□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 CPLX1O14810 134 aa13.81□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 ZNF165P49910 485 aa13.81□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 INTS5Q6P9B9 1019 aaKnown RBP13.81□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 FBXW7Q969H0 707 aa13.81□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 SPEF2Q9C093 1822 aa13.81□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 B4E1Z4 1266 aa13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 ERVV-1B6SEH8 477 aa13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 SNW1Q13573 536 aaKnown RBP13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 DNTTIP2Q5QJE6 756 aaKnown RBP13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 STK11IPQ8N1F8 1099 aa13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 C8orf76Q96K31 380 aa13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 KCNF1Q9H3M0 494 aa13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 CRKLP46109 303 aaKnown RBP13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 EIF5P55010 431 aaKnown RBP13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 PUM3Q15397 648 aaKnown RBP13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 FBXL16Q8N461 479 aa13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 CLIC4Q9Y696 253 aa13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 NHSL1Q5SYE7 1610 aa13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 NUP98P52948 1817 aa13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 SLIT2O94813 1529 aa13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 TRDNQ13061 729 aa13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 RASGRF1Q13972 1273 aa13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 NOLC1Q14978 699 aaKnown RBP eCLIP13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 LPIN2Q92539 896 aa13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 MPHOSPH8Q99549 860 aa13.8□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 MAGEB6Q8N7X4 407 aa13.79□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 FSIP1Q8NA03 581 aa13.79□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 PIBF1Q8WXW3 757 aa13.79□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 AIDAQ96BJ3 306 aa13.79□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 ZNF396Q96N95 335 aaPredicted RBP13.79□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 MYL10Q9BUA6 226 aa13.79□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 PYCARDQ9ULZ3 195 aa13.79□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 PCDHA7Q9UN72 937 aa13.79□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 IQSEC3Q9UPP2 1182 aaPredicted RBP13.79□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 LRP6O75581 1613 aa13.79□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 A0A1B0GVL5 298 aa13.79□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 TCRBV5S4A2TA0A5A2 114 aa13.79□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 WTIPA6NIX2 430 aaPredicted RBP13.79□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 KIF28PB7ZC32 967 aa13.79□□□□□ -0.2
HMGN3-AS1-201ENST00000604516 TPM2P07951 284 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms