RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 FAM83GA6ND36 823 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 POTECB2RU33 542 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 NPHP1O15259 732 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 SIAH2O43255 324 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 SKILP12757 684 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 PDCP20941 246 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 HNRNPH2P55795 449 aaKnown RBP7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 RBM6P78332 1123 aaKnown RBP7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 ARID5BQ14865 1188 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 TMCO3Q6UWJ1 677 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 RUFY3Q7L099 469 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 PCMTD1Q96MG8 357 aaPredicted RBP7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 TTC14Q96N46 770 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 SCAND2PQ9GZW5 306 aaPredicted RBP7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 DNAJC25Q9H1X3 360 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 RASSF4Q9H2L5 321 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 DACT1Q9NYF0 836 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 POLKQ9UBT6 870 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 SNX14Q9Y5W7 946 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 WASF2Q9Y6W5 498 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 SALL3Q9BXA9 1300 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 BECN2A8MW95 431 aa7.55□□□□□ -1.2
SRGAP2-211ENST00000604423 LIG1P18858 919 aa7.55□□□□□ -1.2
SRGAP2-211ENST00000604423 SNW1Q13573 536 aaKnown RBP7.55□□□□□ -1.2
SRGAP2-211ENST00000604423 DCTN1Q14203 1278 aa7.55□□□□□ -1.2
SRGAP2-211ENST00000604423 ZNF787Q6DD87 383 aa7.55□□□□□ -1.2
SRGAP2-211ENST00000604423 FILIP1Q7Z7B0 1213 aa7.55□□□□□ -1.2
SRGAP2-211ENST00000604423 CNTROBQ8N137 903 aa7.55□□□□□ -1.2
SRGAP2-211ENST00000604423 SPATA32Q96LK8 384 aa7.55□□□□□ -1.2
SRGAP2-211ENST00000604423 CLSTN2Q9H4D0 955 aa7.55□□□□□ -1.2
SRGAP2-211ENST00000604423 EFCC1Q9HA90 598 aa7.55□□□□□ -1.2
SRGAP2-211ENST00000604423 TRMT1Q9NXH9 659 aaKnown RBP7.55□□□□□ -1.2
SRGAP2-211ENST00000604423 FEZ2Q9UHY8 353 aaPredicted RBP7.55□□□□□ -1.2
SRGAP2-211ENST00000604423 NPHP3Q7Z494 1330 aa7.55□□□□□ -1.2
SRGAP2-211ENST00000604423 NPATQ14207 1427 aa7.55□□□□□ -1.2
SRGAP2-211ENST00000604423 YTHDC2Q9H6S0 1430 aaKnown RBP7.55□□□□□ -1.2
SRGAP2-211ENST00000604423 HECW2Q9P2P5 1572 aa7.55□□□□□ -1.2
SRGAP2-211ENST00000604423 MAGEB6P1A0A0J9YX57 407 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 CCDC69A6NI79 296 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 USP27XA6NNY8 438 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 GNAI3P08754 354 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 RFC5P40937 340 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 GSDMDP57764 484 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 NR6A1Q15406 480 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 CCDC144BQ3MJ40 725 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 LARP1BQ659C4 914 aaKnown RBP7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 PPP2R2DQ66LE6 453 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 TTC6Q86TZ1 520 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 CCDC144CPQ8IYA2 1237 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 GOLGA6L1Q8N7Z2 621 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 MRFAP1L1Q96HT8 127 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 PDRG1Q9NUG6 133 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 STAP2Q9UGK3 403 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 PIK3C2BO00750 1634 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 SGSM2O43147 1006 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 AVPP01185 164 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 C4orf48Q5BLP8 95 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 VPS53Q5VIR6 699 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 SARM1Q6SZW1 724 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 CCAR2Q8N163 923 aaKnown RBP7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 HMX1Q9NP08 348 aaPredicted RBP7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 CYP46A1Q9Y6A2 500 aa7.54□□□□□ -1.2
SRGAP2-211ENST00000604423 PTPRMP28827 1452 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 ATP7BP35670 1465 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 ADGRL3Q9HAR2 1447 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 TTC21BQ7Z4L5 1316 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 TTC21AQ8NDW8 1320 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 POLR3GO15318 223 aaPredicted RBP7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 LARGE1O95461 756 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 MAP4K4O95819 1239 aaPredicted RBP7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 PNMA6AP0CW24 399 aaPredicted RBP7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 H2AFXP16104 143 aaPredicted RBP7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 IL13P35225 146 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 STX1AQ16623 288 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 ARHGAP29Q52LW3 1261 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 MUM1L1Q5H9M0 696 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 CTR9Q6PD62 1173 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 KRBA2Q6ZNG9 492 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 FERMT3Q86UX7 667 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 UNC5CLQ8IV45 518 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 MNS1Q8NEH6 495 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 NEK11Q8NG66 645 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 EPS8L1Q8TE68 723 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 RUFY2Q8WXA3 655 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 JAKMIP1Q96N16 626 aaKnown RBP7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 ZNF446Q9NWS9 450 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 HYPKQ9NX55 129 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 LRRFIP2Q9Y608 721 aaKnown RBP7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 KIDINS220Q9ULH0 1771 aa7.53□□□□□ -1.2
SRGAP2-211ENST00000604423 USP17L8P0C7I0 530 aa7.52□□□□□ -1.2
SRGAP2-211ENST00000604423 VARSP26640 1264 aaKnown RBP7.52□□□□□ -1.2
SRGAP2-211ENST00000604423 ERCC6LQ2NKX8 1250 aa7.52□□□□□ -1.2
SRGAP2-211ENST00000604423 CDC37L1Q7L3B6 337 aa7.52□□□□□ -1.2
SRGAP2-211ENST00000604423 UBXN4Q92575 508 aa7.52□□□□□ -1.2
SRGAP2-211ENST00000604423 PRAM1Q96QH2 718 aa7.52□□□□□ -1.2
SRGAP2-211ENST00000604423 STK31Q9BXU1 1019 aa7.52□□□□□ -1.2
SRGAP2-211ENST00000604423 EMILIN1Q9Y6C2 1016 aa7.52□□□□□ -1.2
SRGAP2-211ENST00000604423 ARHGEF10O15013 1369 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms