RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 COPS6Q7L5N1 327 aa17.71■□□□□ 0.43
LYSMD4-211ENST00000604213 FMNL2Q96PY5 1086 aa17.71■□□□□ 0.43
LYSMD4-211ENST00000604213 CEBPAP49715 358 aaPredicted RBP17.71■□□□□ 0.42
LYSMD4-211ENST00000604213 IRX5P78411 483 aaPredicted RBP17.71■□□□□ 0.42
LYSMD4-211ENST00000604213 FANCCQ00597 558 aa17.71■□□□□ 0.42
LYSMD4-211ENST00000604213 OTUD7BQ6GQQ9 843 aa17.71■□□□□ 0.42
LYSMD4-211ENST00000604213 TRIM65Q6PJ69 517 aa17.71■□□□□ 0.42
LYSMD4-211ENST00000604213 CHST3Q7LGC8 479 aa17.71■□□□□ 0.42
LYSMD4-211ENST00000604213 HOMER1Q86YM7 354 aa17.71■□□□□ 0.42
LYSMD4-211ENST00000604213 BBXQ8WY36 941 aaPredicted RBP17.71■□□□□ 0.42
LYSMD4-211ENST00000604213 POLR3EQ9NVU0 708 aa17.71■□□□□ 0.42
LYSMD4-211ENST00000604213 DNAI1Q9UI46 699 aa17.71■□□□□ 0.42
LYSMD4-211ENST00000604213 ZNF202O95125 648 aa17.7■□□□□ 0.42
LYSMD4-211ENST00000604213 KCNH5Q8NCM2 988 aa17.7■□□□□ 0.42
LYSMD4-211ENST00000604213 CHMP4CQ96CF2 233 aa17.7■□□□□ 0.42
LYSMD4-211ENST00000604213 HSD3B7Q9H2F3 369 aa17.7■□□□□ 0.42
LYSMD4-211ENST00000604213 SPTLC2O15270 562 aa17.69■□□□□ 0.42
LYSMD4-211ENST00000604213 CCP110O43303 1012 aa17.69■□□□□ 0.42
LYSMD4-211ENST00000604213 HSPD1P10809 573 aaKnown RBP17.69■□□□□ 0.42
LYSMD4-211ENST00000604213 ZMYM1Q5SVZ6 1142 aa17.69■□□□□ 0.42
LYSMD4-211ENST00000604213 GORABQ5T7V8 394 aa17.69■□□□□ 0.42
LYSMD4-211ENST00000604213 GOLIM4O00461 696 aa17.69■□□□□ 0.42
LYSMD4-211ENST00000604213 IKBKBO14920 756 aa17.69■□□□□ 0.42
LYSMD4-211ENST00000604213 FANCGO15287 622 aa17.69■□□□□ 0.42
LYSMD4-211ENST00000604213 EVCP57679 992 aa17.69■□□□□ 0.42
LYSMD4-211ENST00000604213 UBXN4Q92575 508 aa17.69■□□□□ 0.42
LYSMD4-211ENST00000604213 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.69■□□□□ 0.42
LYSMD4-211ENST00000604213 PHRF1Q9P1Y6 1649 aaKnown RBP17.69■□□□□ 0.42
LYSMD4-211ENST00000604213 TADA3O75528 432 aa17.68■□□□□ 0.42
LYSMD4-211ENST00000604213 POLR3DP05423 398 aaPredicted RBP17.68■□□□□ 0.42
LYSMD4-211ENST00000604213 LMOD1P29536 600 aaPredicted RBP17.68■□□□□ 0.42
LYSMD4-211ENST00000604213 FBXL16Q8N461 479 aa17.68■□□□□ 0.42
LYSMD4-211ENST00000604213 TMX1Q9H3N1 280 aa17.68■□□□□ 0.42
LYSMD4-211ENST00000604213 PAG1Q9NWQ8 432 aa17.68■□□□□ 0.42
LYSMD4-211ENST00000604213 CCDC9Q9Y3X0 531 aaKnown RBP17.68■□□□□ 0.42
LYSMD4-211ENST00000604213 ATP1A3P13637 1013 aa17.68■□□□□ 0.42
LYSMD4-211ENST00000604213 AXDND1Q5T1B0 1012 aaPredicted RBP17.68■□□□□ 0.42
LYSMD4-211ENST00000604213 TMCO3Q6UWJ1 677 aa17.68■□□□□ 0.42
LYSMD4-211ENST00000604213 GPHNQ9NQX3 736 aaPredicted RBP17.68■□□□□ 0.42
LYSMD4-211ENST00000604213 ARGLU1Q9NWB6 273 aaPredicted RBP17.68■□□□□ 0.42
LYSMD4-211ENST00000604213 SLC39A6Q13433 755 aa17.67■□□□□ 0.42
LYSMD4-211ENST00000604213 MYSM1Q5VVJ2 828 aa17.67■□□□□ 0.42
LYSMD4-211ENST00000604213 UBE3BQ7Z3V4 1068 aa17.67■□□□□ 0.42
LYSMD4-211ENST00000604213 REXO1L1PQ8IX06 675 aa17.67■□□□□ 0.42
LYSMD4-211ENST00000604213 C8orf76Q96K31 380 aa17.67■□□□□ 0.42
LYSMD4-211ENST00000604213 SRRTQ9BXP5 876 aaKnown RBP17.67■□□□□ 0.42
LYSMD4-211ENST00000604213 PFKFB1P16118 471 aa17.67■□□□□ 0.42
LYSMD4-211ENST00000604213 CMA1P23946 247 aa17.67■□□□□ 0.42
LYSMD4-211ENST00000604213 ZNF790Q6PG37 636 aa17.67■□□□□ 0.42
LYSMD4-211ENST00000604213 ANKRD13DQ6ZTN6 518 aa17.67■□□□□ 0.42
LYSMD4-211ENST00000604213 FBXO18Q8NFZ0 1043 aa17.67■□□□□ 0.42
LYSMD4-211ENST00000604213 TULP2O00295 520 aa17.66■□□□□ 0.42
LYSMD4-211ENST00000604213 LRP10Q7Z4F1 713 aa17.66■□□□□ 0.42
LYSMD4-211ENST00000604213 BRAPQ7Z569 592 aa17.66■□□□□ 0.42
LYSMD4-211ENST00000604213 DPF2Q92785 391 aa17.66■□□□□ 0.42
LYSMD4-211ENST00000604213 MAST3O60307 1309 aa17.66■□□□□ 0.42
LYSMD4-211ENST00000604213 TTLL5Q6EMB2 1281 aa17.66■□□□□ 0.42
LYSMD4-211ENST00000604213 TICAM2Q86XR7 235 aa17.66■□□□□ 0.42
LYSMD4-211ENST00000604213 MNS1Q8NEH6 495 aa17.66■□□□□ 0.42
LYSMD4-211ENST00000604213 C5P01031 1676 aa17.65■□□□□ 0.42
LYSMD4-211ENST00000604213 ADAMTS7Q9UKP4 1686 aa17.65■□□□□ 0.42
LYSMD4-211ENST00000604213 EFCAB8A8MWE9 144 aa17.65■□□□□ 0.42
LYSMD4-211ENST00000604213 URI1O94763 535 aaPredicted RBP17.65■□□□□ 0.42
LYSMD4-211ENST00000604213 HNRNPH2P55795 449 aaKnown RBP17.65■□□□□ 0.42
LYSMD4-211ENST00000604213 PSME1Q06323 249 aa17.65■□□□□ 0.42
LYSMD4-211ENST00000604213 LRRFIP1Q32MZ4 808 aaKnown RBP17.65■□□□□ 0.42
LYSMD4-211ENST00000604213 ANO1Q5XXA6 986 aa17.65■□□□□ 0.42
LYSMD4-211ENST00000604213 ANKRD24Q8TF21 1146 aa17.65■□□□□ 0.42
LYSMD4-211ENST00000604213 CARD6Q9BX69 1037 aa17.65■□□□□ 0.42
LYSMD4-211ENST00000604213 UBXN6Q9BZV1 441 aa17.65■□□□□ 0.42
LYSMD4-211ENST00000604213 PARP3Q9Y6F1 533 aa17.65■□□□□ 0.42
LYSMD4-211ENST00000604213 MROH7-TTC4A0A0A0MT08 1334 aa17.65■□□□□ 0.42
LYSMD4-211ENST00000604213 KIF28PB7ZC32 967 aa17.65■□□□□ 0.42
LYSMD4-211ENST00000604213 UBASH3AP57075 661 aa17.65■□□□□ 0.42
LYSMD4-211ENST00000604213 ISM2Q6H9L7 571 aa17.65■□□□□ 0.42
LYSMD4-211ENST00000604213 ARHGEF25Q86VW2 580 aa17.65■□□□□ 0.42
LYSMD4-211ENST00000604213 TUBE1Q9UJT0 475 aa17.65■□□□□ 0.42
LYSMD4-211ENST00000604213 LMTK3Q96Q04 1460 aa17.64■□□□□ 0.41
LYSMD4-211ENST00000604213 WDHD1O75717 1129 aaPredicted RBP17.64■□□□□ 0.41
LYSMD4-211ENST00000604213 CASP7P55210 303 aa17.64■□□□□ 0.41
LYSMD4-211ENST00000604213 GJB4Q9NTQ9 266 aa17.64■□□□□ 0.41
LYSMD4-211ENST00000604213 RNF113AO15541 343 aaKnown RBP17.64■□□□□ 0.41
LYSMD4-211ENST00000604213 CBFA2T2O43439 604 aa17.64■□□□□ 0.41
LYSMD4-211ENST00000604213 ATP8B1O43520 1251 aa17.64■□□□□ 0.41
LYSMD4-211ENST00000604213 SEC31AO94979 1220 aaKnown RBP17.64■□□□□ 0.41
LYSMD4-211ENST00000604213 TPM1P09493 284 aa17.64■□□□□ 0.41
LYSMD4-211ENST00000604213 CCDC158Q5M9N0 1113 aa17.64■□□□□ 0.41
LYSMD4-211ENST00000604213 FCHSD1Q86WN1 690 aa17.64■□□□□ 0.41
LYSMD4-211ENST00000604213 NEUROD6Q96NK8 337 aa17.64■□□□□ 0.41
LYSMD4-211ENST00000604213 UTP14AQ9BVJ6 771 aaKnown RBP17.64■□□□□ 0.41
LYSMD4-211ENST00000604213 HPS5Q9UPZ3 1129 aa17.64■□□□□ 0.41
LYSMD4-211ENST00000604213 M0R2C6 588 aa17.63■□□□□ 0.41
LYSMD4-211ENST00000604213 SYNE3Q6ZMZ3 975 aa17.63■□□□□ 0.41
LYSMD4-211ENST00000604213 ATG9AQ7Z3C6 839 aa17.63■□□□□ 0.41
LYSMD4-211ENST00000604213 VSTM4Q8IW00 320 aa17.63■□□□□ 0.41
LYSMD4-211ENST00000604213 A0A087WZG4 1122 aa17.62■□□□□ 0.41
LYSMD4-211ENST00000604213 POLR3GO15318 223 aaPredicted RBP17.62■□□□□ 0.41
LYSMD4-211ENST00000604213 CAPN2P17655 700 aa17.62■□□□□ 0.41
LYSMD4-211ENST00000604213 MYL5Q02045 173 aa17.62■□□□□ 0.41
LYSMD4-211ENST00000604213 KIF23Q02241 960 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms