RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 CHST3Q7LGC8 479 aa12.79□□□□□ -0.36
ZNF558-207ENST00000601372 BIN2Q9UBW5 565 aaPredicted RBP12.79□□□□□ -0.36
ZNF558-207ENST00000601372 TEX11Q8IYF3 940 aa12.79□□□□□ -0.36
ZNF558-207ENST00000601372 KRI1Q8N9T8 703 aaKnown RBP12.79□□□□□ -0.36
ZNF558-207ENST00000601372 OVOS2A0A0G2JMS6 1433 aa12.79□□□□□ -0.36
ZNF558-207ENST00000601372 OVOS2A0A0J9YW53 1432 aa12.79□□□□□ -0.36
ZNF558-207ENST00000601372 OVOS2Q6IE36 1432 aa12.79□□□□□ -0.36
ZNF558-207ENST00000601372 EYA2O00167 538 aa12.79□□□□□ -0.36
ZNF558-207ENST00000601372 KIF5BP33176 963 aa12.79□□□□□ -0.36
ZNF558-207ENST00000601372 RBSNQ9H1K0 784 aa12.79□□□□□ -0.36
ZNF558-207ENST00000601372 NEURL1BA8MQ27 555 aa12.78□□□□□ -0.36
ZNF558-207ENST00000601372 NLRP5P59047 1200 aa12.78□□□□□ -0.36
ZNF558-207ENST00000601372 RPS8P62241 208 aaKnown RBP12.78□□□□□ -0.36
ZNF558-207ENST00000601372 FILIP1LQ4L180 1135 aa12.78□□□□□ -0.36
ZNF558-207ENST00000601372 IFIT1BQ5T764 474 aaKnown RBP12.78□□□□□ -0.36
ZNF558-207ENST00000601372 NCOA7Q8NI08 942 aa12.78□□□□□ -0.36
ZNF558-207ENST00000601372 TCP10Q12799 353 aa12.78□□□□□ -0.36
ZNF558-207ENST00000601372 ANO6Q4KMQ2 910 aa12.78□□□□□ -0.36
ZNF558-207ENST00000601372 PDCL2Q8N4E4 241 aa12.78□□□□□ -0.36
ZNF558-207ENST00000601372 IL6STP40189 918 aaPredicted RBP12.78□□□□□ -0.36
ZNF558-207ENST00000601372 CFAP100Q494V2 611 aa12.78□□□□□ -0.36
ZNF558-207ENST00000601372 BRF1Q92994 677 aa12.78□□□□□ -0.36
ZNF558-207ENST00000601372 DALRD3Q5D0E6 543 aaKnown RBP12.78□□□□□ -0.36
ZNF558-207ENST00000601372 MROH5Q6ZUA9 1318 aa12.78□□□□□ -0.36
ZNF558-207ENST00000601372 KIF24Q5T7B8 1368 aa12.78□□□□□ -0.36
ZNF558-207ENST00000601372 CPSF1Q10570 1443 aaKnown RBP12.78□□□□□ -0.36
ZNF558-207ENST00000601372 PRAMEF22A3QJZ6 481 aa12.77□□□□□ -0.36
ZNF558-207ENST00000601372 MAST3O60307 1309 aa12.77□□□□□ -0.36
ZNF558-207ENST00000601372 GTF2IP78347 998 aa12.77□□□□□ -0.36
ZNF558-207ENST00000601372 TRMT1LQ7Z2T5 733 aaKnown RBP12.77□□□□□ -0.36
ZNF558-207ENST00000601372 ZBTB38Q8NAP3 1195 aaPredicted RBP12.77□□□□□ -0.36
ZNF558-207ENST00000601372 XAGE2Q96GT9 111 aa12.77□□□□□ -0.36
ZNF558-207ENST00000601372 MCMDC2Q4G0Z9 681 aa12.77□□□□□ -0.36
ZNF558-207ENST00000601372 ERFEQ4G0M1 354 aa12.77□□□□□ -0.37
ZNF558-207ENST00000601372 ANAPC15P60006 121 aa12.77□□□□□ -0.37
ZNF558-207ENST00000601372 PPFIBP1Q86W92 1011 aa12.77□□□□□ -0.37
ZNF558-207ENST00000601372 CCP110O43303 1012 aa12.76□□□□□ -0.37
ZNF558-207ENST00000601372 MMP10P09238 476 aa12.76□□□□□ -0.37
ZNF558-207ENST00000601372 DLGAP5Q15398 846 aa12.76□□□□□ -0.37
ZNF558-207ENST00000601372 KRT23Q9C075 422 aa12.76□□□□□ -0.37
ZNF558-207ENST00000601372 ANO10Q9NW15 660 aa12.76□□□□□ -0.37
ZNF558-207ENST00000601372 MAGEC2Q9UBF1 373 aaPredicted RBP12.76□□□□□ -0.37
ZNF558-207ENST00000601372 SETBP1Q9Y6X0 1596 aa12.76□□□□□ -0.37
ZNF558-207ENST00000601372 KCNQ2O43526 872 aa12.76□□□□□ -0.37
ZNF558-207ENST00000601372 CREB3L3Q68CJ9 461 aa12.76□□□□□ -0.37
ZNF558-207ENST00000601372 WDR66Q8TBY9 1149 aa12.76□□□□□ -0.37
ZNF558-207ENST00000601372 CBFA2T2O43439 604 aa12.76□□□□□ -0.37
ZNF558-207ENST00000601372 MICU3Q86XE3 530 aa12.76□□□□□ -0.37
ZNF558-207ENST00000601372 R3HDM1Q15032 1099 aaKnown RBP12.76□□□□□ -0.37
ZNF558-207ENST00000601372 SKIDA1Q1XH10 827 aa12.76□□□□□ -0.37
ZNF558-207ENST00000601372 SMARCE1Q969G3 411 aa12.76□□□□□ -0.37
ZNF558-207ENST00000601372 CHAMP1Q96JM3 812 aa12.76□□□□□ -0.37
ZNF558-207ENST00000601372 SMTNL1A8MU46 457 aa12.76□□□□□ -0.37
ZNF558-207ENST00000601372 TNNT1P13805 278 aa12.76□□□□□ -0.37
ZNF558-207ENST00000601372 WTAPQ15007 396 aa12.76□□□□□ -0.37
ZNF558-207ENST00000601372 TTC12Q9H892 705 aaPredicted RBP12.76□□□□□ -0.37
ZNF558-207ENST00000601372 TMOD4Q9NZQ9 345 aa12.76□□□□□ -0.37
ZNF558-207ENST00000601372 SPDYE4A6NLX3 237 aa12.75□□□□□ -0.37
ZNF558-207ENST00000601372 PPP4R3BQ5MIZ7 849 aa12.75□□□□□ -0.37
ZNF558-207ENST00000601372 ESR2Q92731 530 aa12.75□□□□□ -0.37
ZNF558-207ENST00000601372 RNF113AO15541 343 aaKnown RBP12.75□□□□□ -0.37
ZNF558-207ENST00000601372 GNAT2P19087 354 aa12.75□□□□□ -0.37
ZNF558-207ENST00000601372 PKNOX2Q96KN3 472 aa12.75□□□□□ -0.37
ZNF558-207ENST00000601372 AATFQ9NY61 560 aaKnown RBP eCLIP12.75□□□□□ -0.37
ZNF558-207ENST00000601372 CDK12Q9NYV4 1490 aaPredicted RBP12.75□□□□□ -0.37
ZNF558-207ENST00000601372 PTPN14Q15678 1187 aa12.75□□□□□ -0.37
ZNF558-207ENST00000601372 KLHL10Q6JEL2 608 aa12.75□□□□□ -0.37
ZNF558-207ENST00000601372 CCDC129Q6ZRS4 1044 aa12.75□□□□□ -0.37
ZNF558-207ENST00000601372 RUFY3Q7L099 469 aa12.75□□□□□ -0.37
ZNF558-207ENST00000601372 LPIN2Q92539 896 aa12.75□□□□□ -0.37
ZNF558-207ENST00000601372 ABCC4O15439 1325 aa12.75□□□□□ -0.37
ZNF558-207ENST00000601372 DACH1Q9UI36 760 aa12.75□□□□□ -0.37
ZNF558-207ENST00000601372 ATP2B4P23634 1241 aa12.75□□□□□ -0.37
ZNF558-207ENST00000601372 PKP1Q13835 747 aa12.75□□□□□ -0.37
ZNF558-207ENST00000601372 PPP4R3AQ6IN85 833 aa12.75□□□□□ -0.37
ZNF558-207ENST00000601372 DCPSQ96C86 337 aaKnown RBP12.75□□□□□ -0.37
ZNF558-207ENST00000601372 GADD45BO75293 160 aaPredicted RBP12.74□□□□□ -0.37
ZNF558-207ENST00000601372 PRKCSHP14314 528 aaPredicted RBP12.74□□□□□ -0.37
ZNF558-207ENST00000601372 TNNI3KQ59H18 835 aa12.74□□□□□ -0.37
ZNF558-207ENST00000601372 DDX19AQ9NUU7 478 aaKnown RBP12.74□□□□□ -0.37
ZNF558-207ENST00000601372 FPGT-TNNI3KV9GXZ4 949 aa12.74□□□□□ -0.37
ZNF558-207ENST00000601372 ITSN1Q15811 1721 aa12.74□□□□□ -0.37
ZNF558-207ENST00000601372 KDRP35968 1356 aa12.74□□□□□ -0.37
ZNF558-207ENST00000601372 HEG1Q9ULI3 1381 aa12.74□□□□□ -0.37
ZNF558-207ENST00000601372 SLC27A3Q5K4L6 730 aa12.74□□□□□ -0.37
ZNF558-207ENST00000601372 TMC6Q7Z403 805 aa12.74□□□□□ -0.37
ZNF558-207ENST00000601372 NDUFB9Q9Y6M9 179 aa12.74□□□□□ -0.37
ZNF558-207ENST00000601372 POLR1AO95602 1720 aaPredicted RBP12.74□□□□□ -0.37
ZNF558-207ENST00000601372 NBPF7P0C2Y1 421 aaPredicted RBP12.74□□□□□ -0.37
ZNF558-207ENST00000601372 STX1AQ16623 288 aa12.74□□□□□ -0.37
ZNF558-207ENST00000601372 CD2BP2O95400 341 aaKnown RBP12.74□□□□□ -0.37
ZNF558-207ENST00000601372 DACT1Q9NYF0 836 aa12.74□□□□□ -0.37
ZNF558-207ENST00000601372 SNX14Q9Y5W7 946 aa12.74□□□□□ -0.37
ZNF558-207ENST00000601372 ERICH4A6NGS2 130 aa12.74□□□□□ -0.37
ZNF558-207ENST00000601372 METAP2P50579 478 aaKnown RBP eCLIP12.74□□□□□ -0.37
ZNF558-207ENST00000601372 TXNRD1Q16881 649 aa12.74□□□□□ -0.37
ZNF558-207ENST00000601372 PROSER3Q2NL68 480 aa12.74□□□□□ -0.37
ZNF558-207ENST00000601372 CCDC178Q5BJE1 867 aa12.74□□□□□ -0.37
ZNF558-207ENST00000601372 DNAJC25Q9H1X3 360 aa12.74□□□□□ -0.37
ZNF558-207ENST00000601372 BMP2KQ9NSY1 1161 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms