RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 IL27Q8NEV9 243 aa18.1■□□□□ 0.49
HIF3A-218ENST00000600383 TNRC6CQ9HCJ0 1690 aaKnown RBP18.09■□□□□ 0.49
HIF3A-218ENST00000600383 EN1Q05925 392 aaPredicted RBP18.09■□□□□ 0.49
HIF3A-218ENST00000600383 KRT32Q14532 448 aa18.09■□□□□ 0.49
HIF3A-218ENST00000600383 UBE3CQ15386 1083 aa18.09■□□□□ 0.49
HIF3A-218ENST00000600383 NEK1Q96PY6 1258 aa18.09■□□□□ 0.49
HIF3A-218ENST00000600383 CWC22Q9HCG8 908 aaKnown RBP18.09■□□□□ 0.49
HIF3A-218ENST00000600383 ZNF804BA4D1E1 1349 aa18.08■□□□□ 0.49
HIF3A-218ENST00000600383 MYO5AQ9Y4I1 1855 aaKnown RBP18.08■□□□□ 0.48
HIF3A-218ENST00000600383 APPP05067 770 aa18.08■□□□□ 0.48
HIF3A-218ENST00000600383 EZH2Q15910 746 aaKnown RBP18.08■□□□□ 0.48
HIF3A-218ENST00000600383 MSL1Q68DK7 614 aa18.08■□□□□ 0.48
HIF3A-218ENST00000600383 TNPO1Q92973 898 aaKnown RBP18.08■□□□□ 0.48
HIF3A-218ENST00000600383 RPAP1Q9BWH6 1393 aaPredicted RBP18.08■□□□□ 0.48
HIF3A-218ENST00000600383 ARAP2Q8WZ64 1704 aa18.08■□□□□ 0.48
HIF3A-218ENST00000600383 FGAP02671 866 aa18.07■□□□□ 0.48
HIF3A-218ENST00000600383 RPS6KB1P23443 525 aa18.07■□□□□ 0.48
HIF3A-218ENST00000600383 CUL4AQ13619 759 aa18.07■□□□□ 0.48
HIF3A-218ENST00000600383 FLAD1Q8NFF5 587 aa18.07■□□□□ 0.48
HIF3A-218ENST00000600383 AIDAQ96BJ3 306 aa18.07■□□□□ 0.48
HIF3A-218ENST00000600383 RBM17Q96I25 401 aaKnown RBP18.07■□□□□ 0.48
HIF3A-218ENST00000600383 HIBADHP31937 336 aaKnown RBP18.07■□□□□ 0.48
HIF3A-218ENST00000600383 HAND2P61296 217 aa18.07■□□□□ 0.48
HIF3A-218ENST00000600383 TXNRD3Q86VQ6 643 aa18.07■□□□□ 0.48
HIF3A-218ENST00000600383 TCRBV5S4A2TA0A5A2 114 aa18.06■□□□□ 0.48
HIF3A-218ENST00000600383 PKP1Q13835 747 aa18.06■□□□□ 0.48
HIF3A-218ENST00000600383 RAB3GAP1Q15042 981 aa18.06■□□□□ 0.48
HIF3A-218ENST00000600383 CRY2Q49AN0 593 aa18.06■□□□□ 0.48
HIF3A-218ENST00000600383 RAI14Q9P0K7 980 aa18.06■□□□□ 0.48
HIF3A-218ENST00000600383 NSFL1CQ9UNZ2 370 aaKnown RBP18.06■□□□□ 0.48
HIF3A-218ENST00000600383 FOXP2O15409 715 aa18.05■□□□□ 0.48
HIF3A-218ENST00000600383 STOX1Q6ZVD7 989 aa18.05■□□□□ 0.48
HIF3A-218ENST00000600383 FBXO33Q7Z6M2 555 aa18.05■□□□□ 0.48
HIF3A-218ENST00000600383 CTNNA3Q9UI47 895 aa18.05■□□□□ 0.48
HIF3A-218ENST00000600383 DENND2AQ9ULE3 1009 aa18.05■□□□□ 0.48
HIF3A-218ENST00000600383 PNPLA7Q6ZV29 1317 aa18.05■□□□□ 0.48
HIF3A-218ENST00000600383 LARGE1O95461 756 aa18.05■□□□□ 0.48
HIF3A-218ENST00000600383 MMP10P09238 476 aa18.05■□□□□ 0.48
HIF3A-218ENST00000600383 INTS4Q96HW7 963 aaKnown RBP18.05■□□□□ 0.48
HIF3A-218ENST00000600383 MYH7P12883 1935 aa18.05■□□□□ 0.48
HIF3A-218ENST00000600383 E7EWF7 191 aa18.04■□□□□ 0.48
HIF3A-218ENST00000600383 IMMTQ16891 758 aaKnown RBP18.04■□□□□ 0.48
HIF3A-218ENST00000600383 DTNBO60941 627 aa18.04■□□□□ 0.48
HIF3A-218ENST00000600383 NUCB2P80303 420 aa18.04■□□□□ 0.48
HIF3A-218ENST00000600383 FGD1P98174 961 aa18.04■□□□□ 0.48
HIF3A-218ENST00000600383 MIGA1Q8NAN2 632 aa18.04■□□□□ 0.48
HIF3A-218ENST00000600383 LRRC2Q9BYS8 371 aa18.04■□□□□ 0.48
HIF3A-218ENST00000600383 TPCN1Q9ULQ1 816 aa18.04■□□□□ 0.48
HIF3A-218ENST00000600383 JAG2Q9Y219 1238 aa18.04■□□□□ 0.48
HIF3A-218ENST00000600383 PARP3Q9Y6F1 533 aa18.04■□□□□ 0.48
HIF3A-218ENST00000600383 MBD4O95243 580 aa18.03■□□□□ 0.48
HIF3A-218ENST00000600383 CHAF1AQ13111 956 aaPredicted RBP18.03■□□□□ 0.48
HIF3A-218ENST00000600383 ME3Q16798 604 aa18.03■□□□□ 0.48
HIF3A-218ENST00000600383 FOXD4L5Q5VV16 416 aaPredicted RBP18.03■□□□□ 0.48
HIF3A-218ENST00000600383 CCDC83Q8IWF9 413 aa18.03■□□□□ 0.48
HIF3A-218ENST00000600383 FOXD4L4Q8WXT5 416 aaPredicted RBP18.03■□□□□ 0.48
HIF3A-218ENST00000600383 GPR101Q96P66 508 aaPredicted RBP18.03■□□□□ 0.48
HIF3A-218ENST00000600383 STRBPQ96SI9 672 aaKnown RBP18.03■□□□□ 0.48
HIF3A-218ENST00000600383 ARMT1Q9H993 441 aa18.03■□□□□ 0.48
HIF3A-218ENST00000600383 XDHP47989 1333 aa18.03■□□□□ 0.48
HIF3A-218ENST00000600383 ZNF213O14771 459 aa18.02■□□□□ 0.48
HIF3A-218ENST00000600383 CYP7A1P22680 504 aa18.02■□□□□ 0.48
HIF3A-218ENST00000600383 GPSM2P81274 684 aa18.02■□□□□ 0.48
HIF3A-218ENST00000600383 ANKRD1Q15327 319 aa18.02■□□□□ 0.48
HIF3A-218ENST00000600383 NECAB1Q8N987 351 aa18.02■□□□□ 0.48
HIF3A-218ENST00000600383 ZSCAN31Q96LW9 406 aaPredicted RBP18.02■□□□□ 0.48
HIF3A-218ENST00000600383 LEMD3Q9Y2U8 911 aa18.02■□□□□ 0.48
HIF3A-218ENST00000600383 BBOX1O75936 387 aa18.02■□□□□ 0.47
HIF3A-218ENST00000600383 MCM4P33991 863 aa18.02■□□□□ 0.47
HIF3A-218ENST00000600383 TOB2Q14106 344 aaPredicted RBP18.02■□□□□ 0.47
HIF3A-218ENST00000600383 Q6ZUG5 572 aa18.02■□□□□ 0.47
HIF3A-218ENST00000600383 CHST3Q7LGC8 479 aa18.02■□□□□ 0.47
HIF3A-218ENST00000600383 CAMKK2Q96RR4 588 aa18.02■□□□□ 0.47
HIF3A-218ENST00000600383 ANO8Q9HCE9 1232 aaPredicted RBP18.02■□□□□ 0.47
HIF3A-218ENST00000600383 A0A1B0GUL6 1792 aa18.02■□□□□ 0.47
HIF3A-218ENST00000600383 BRIP1Q9BX63 1249 aa18.01■□□□□ 0.47
HIF3A-218ENST00000600383 HMGB1P09429 215 aaKnown RBP18.01■□□□□ 0.47
HIF3A-218ENST00000600383 STK3Q13188 491 aa18.01■□□□□ 0.47
HIF3A-218ENST00000600383 SLC15A2Q16348 729 aa18.01■□□□□ 0.47
HIF3A-218ENST00000600383 DHX32Q7L7V1 743 aaKnown RBP18.01■□□□□ 0.47
HIF3A-218ENST00000600383 SH2B1Q9NRF2 756 aaPredicted RBP18.01■□□□□ 0.47
HIF3A-218ENST00000600383 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.01■□□□□ 0.47
HIF3A-218ENST00000600383 COL1A1P02452 1464 aaPredicted RBP18■□□□□ 0.47
HIF3A-218ENST00000600383 UFL1O94874 794 aa18■□□□□ 0.47
HIF3A-218ENST00000600383 HOXA10P31260 410 aaPredicted RBP18■□□□□ 0.47
HIF3A-218ENST00000600383 SF3B2Q13435 895 aaKnown RBP18■□□□□ 0.47
HIF3A-218ENST00000600383 KLRG2A4D1S0 409 aaPredicted RBP17.99■□□□□ 0.47
HIF3A-218ENST00000600383 PATL2C9JE40 543 aaKnown RBP17.99■□□□□ 0.47
HIF3A-218ENST00000600383 SEMA3EO15041 775 aa17.99■□□□□ 0.47
HIF3A-218ENST00000600383 PRKAB2O43741 272 aa17.99■□□□□ 0.47
HIF3A-218ENST00000600383 ADGRA1Q86SQ6 560 aa17.99■□□□□ 0.47
HIF3A-218ENST00000600383 LCORLQ8N3X6 602 aa17.99■□□□□ 0.47
HIF3A-218ENST00000600383 GBP4Q96PP9 640 aa17.99■□□□□ 0.47
HIF3A-218ENST00000600383 CRAMP1Q96RY5 1269 aa17.99■□□□□ 0.47
HIF3A-218ENST00000600383 ALDH8A1Q9H2A2 487 aaPredicted RBP17.99■□□□□ 0.47
HIF3A-218ENST00000600383 STK32BQ9NY57 414 aa17.99■□□□□ 0.47
HIF3A-218ENST00000600383 SMC3Q9UQE7 1217 aa17.99■□□□□ 0.47
HIF3A-218ENST00000600383 TNS1Q9HBL0 1735 aaKnown RBP17.99■□□□□ 0.47
HIF3A-218ENST00000600383 BRF1Q92994 677 aa17.99■□□□□ 0.47
HIF3A-218ENST00000600383 SLC4A4Q9Y6R1 1079 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms