RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 SBNO2Q9Y2G9 1366 aa14.54□□□□□ -0.08
DNMT1-228ENST00000592705 SPTLC2O15270 562 aa14.53□□□□□ -0.08
DNMT1-228ENST00000592705 PAFAH1B1P43034 410 aa14.53□□□□□ -0.08
DNMT1-228ENST00000592705 BRDTQ58F21 947 aaPredicted RBP14.53□□□□□ -0.08
DNMT1-228ENST00000592705 DHX32Q7L7V1 743 aaKnown RBP14.53□□□□□ -0.08
DNMT1-228ENST00000592705 FAM114A1Q8IWE2 563 aa14.53□□□□□ -0.08
DNMT1-228ENST00000592705 SH2D4AQ9H788 454 aa14.53□□□□□ -0.08
DNMT1-228ENST00000592705 AMPD3Q01432 767 aa14.53□□□□□ -0.08
DNMT1-228ENST00000592705 SRRTQ9BXP5 876 aaKnown RBP14.53□□□□□ -0.08
DNMT1-228ENST00000592705 TMX1Q9H3N1 280 aa14.53□□□□□ -0.08
DNMT1-228ENST00000592705 SYNMO15061 1565 aa14.53□□□□□ -0.08
DNMT1-228ENST00000592705 PPIP5K2O43314 1243 aa14.53□□□□□ -0.08
DNMT1-228ENST00000592705 KIF20AO95235 890 aa14.53□□□□□ -0.08
DNMT1-228ENST00000592705 WTAPQ15007 396 aa14.53□□□□□ -0.08
DNMT1-228ENST00000592705 UNC5CLQ8IV45 518 aa14.53□□□□□ -0.08
DNMT1-228ENST00000592705 KAT14Q9H8E8 782 aa14.53□□□□□ -0.08
DNMT1-228ENST00000592705 SEPT11Q9NVA2 429 aaKnown RBP14.53□□□□□ -0.08
DNMT1-228ENST00000592705 TMOD4Q9NZQ9 345 aa14.53□□□□□ -0.08
DNMT1-228ENST00000592705 RNF113AO15541 343 aaKnown RBP14.53□□□□□ -0.08
DNMT1-228ENST00000592705 RNMTO43148 476 aaKnown RBP14.53□□□□□ -0.08
DNMT1-228ENST00000592705 CYP7A1P22680 504 aa14.53□□□□□ -0.08
DNMT1-228ENST00000592705 RMND1Q9NWS8 449 aa14.53□□□□□ -0.08
DNMT1-228ENST00000592705 STX8Q9UNK0 236 aa14.53□□□□□ -0.08
DNMT1-228ENST00000592705 ABCC4O15439 1325 aa14.53□□□□□ -0.08
DNMT1-228ENST00000592705 MAST3O60307 1309 aa14.53□□□□□ -0.08
DNMT1-228ENST00000592705 PTGS1P23219 599 aa14.52□□□□□ -0.08
DNMT1-228ENST00000592705 CWF19L2Q2TBE0 894 aaKnown RBP14.52□□□□□ -0.08
DNMT1-228ENST00000592705 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.52□□□□□ -0.081e-7■■■□□ 18.1
DNMT1-228ENST00000592705 PRC1O43663 620 aa14.52□□□□□ -0.08
DNMT1-228ENST00000592705 SLU7O95391 586 aaKnown RBP14.52□□□□□ -0.08
DNMT1-228ENST00000592705 HOXB7P09629 217 aa14.52□□□□□ -0.08
DNMT1-228ENST00000592705 TCP11L1Q9NUJ3 509 aa14.52□□□□□ -0.08
DNMT1-228ENST00000592705 LMBRD1Q9NUN5 540 aa14.52□□□□□ -0.08
DNMT1-228ENST00000592705 SNX14Q9Y5W7 946 aa14.52□□□□□ -0.09
DNMT1-228ENST00000592705 MTIF2P46199 727 aaKnown RBP14.52□□□□□ -0.09
DNMT1-228ENST00000592705 MAP3K9P80192 1104 aa14.52□□□□□ -0.09
DNMT1-228ENST00000592705 BRAPQ7Z569 592 aa14.52□□□□□ -0.09
DNMT1-228ENST00000592705 VPS36Q86VN1 386 aa14.52□□□□□ -0.09
DNMT1-228ENST00000592705 EHBP1Q8NDI1 1231 aa14.52□□□□□ -0.09
DNMT1-228ENST00000592705 CCDC94Q9BW85 323 aaPredicted RBP14.52□□□□□ -0.09
DNMT1-228ENST00000592705 KIAA0232Q92628 1395 aa14.52□□□□□ -0.09
DNMT1-228ENST00000592705 PTPDC1A2A3K4 754 aa14.51□□□□□ -0.09
DNMT1-228ENST00000592705 LDHBP07195 334 aaKnown RBP14.51□□□□□ -0.09
DNMT1-228ENST00000592705 ALS2CR12Q96Q35 445 aa14.51□□□□□ -0.09
DNMT1-228ENST00000592705 SBNO1A3KN83 1393 aa14.51□□□□□ -0.09
DNMT1-228ENST00000592705 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.51□□□□□ -0.09
DNMT1-228ENST00000592705 ZNF526Q8TF50 670 aaPredicted RBP14.51□□□□□ -0.09
DNMT1-228ENST00000592705 NOD1Q9Y239 953 aa14.51□□□□□ -0.09
DNMT1-228ENST00000592705 SGSM2O43147 1006 aa14.51□□□□□ -0.09
DNMT1-228ENST00000592705 DNAI1Q9UI46 699 aa14.51□□□□□ -0.09
DNMT1-228ENST00000592705 N4BP3O15049 544 aa14.51□□□□□ -0.09
DNMT1-228ENST00000592705 NEBLO76041 1014 aa14.51□□□□□ -0.09
DNMT1-228ENST00000592705 RPS6KB1P23443 525 aa14.51□□□□□ -0.09
DNMT1-228ENST00000592705 PPM1FP49593 454 aaPredicted RBP14.51□□□□□ -0.09
DNMT1-228ENST00000592705 OTUD7BQ6GQQ9 843 aa14.51□□□□□ -0.09
DNMT1-228ENST00000592705 ZNF521Q96K83 1311 aa14.51□□□□□ -0.09
DNMT1-228ENST00000592705 C2CD5Q86YS7 1000 aa14.5□□□□□ -0.09
DNMT1-228ENST00000592705 AFF2P51816 1311 aa14.5□□□□□ -0.09
DNMT1-228ENST00000592705 SPAG1Q07617 926 aa14.5□□□□□ -0.09
DNMT1-228ENST00000592705 APOBRQ0VD83 1088 aa14.5□□□□□ -0.09
DNMT1-228ENST00000592705 RTN1Q16799 776 aa14.5□□□□□ -0.09
DNMT1-228ENST00000592705 CALML4Q96GE6 196 aa14.5□□□□□ -0.09
DNMT1-228ENST00000592705 ZMYND15Q9H091 742 aa14.5□□□□□ -0.09
DNMT1-228ENST00000592705 ATF5Q9Y2D1 282 aaPredicted RBP14.5□□□□□ -0.09
DNMT1-228ENST00000592705 UBA7P41226 1012 aa14.5□□□□□ -0.09
DNMT1-228ENST00000592705 TFCP2Q12800 502 aa14.5□□□□□ -0.09
DNMT1-228ENST00000592705 BICC1Q9H694 974 aaKnown RBP14.5□□□□□ -0.09
DNMT1-228ENST00000592705 SAMM50Q9Y512 469 aa14.5□□□□□ -0.09
DNMT1-228ENST00000592705 TSPY3P0CV98 308 aa14.49□□□□□ -0.09
DNMT1-228ENST00000592705 TSPY8P0CW00 308 aa14.49□□□□□ -0.09
DNMT1-228ENST00000592705 GTF2F1P35269 517 aaKnown RBP eCLIP14.49□□□□□ -0.09
DNMT1-228ENST00000592705 TERF1P54274 439 aa14.49□□□□□ -0.09
DNMT1-228ENST00000592705 LUZP1Q86V48 1076 aa14.49□□□□□ -0.09
DNMT1-228ENST00000592705 ZNF710Q8N1W2 664 aa14.49□□□□□ -0.09
DNMT1-228ENST00000592705 FAM107BQ9H098 131 aa14.49□□□□□ -0.09
DNMT1-228ENST00000592705 HELLSQ9NRZ9 838 aa14.49□□□□□ -0.09
DNMT1-228ENST00000592705 MARCKSP29966 332 aaPredicted RBP14.49□□□□□ -0.09
DNMT1-228ENST00000592705 VAT1LQ9HCJ6 419 aa14.49□□□□□ -0.09
DNMT1-228ENST00000592705 CFAP74Q9C0B2 1584 aa14.49□□□□□ -0.09
DNMT1-228ENST00000592705 SULF1Q8IWU6 871 aa14.49□□□□□ -0.09
DNMT1-228ENST00000592705 MBD5Q9P267 1494 aa14.49□□□□□ -0.09
DNMT1-228ENST00000592705 ESR2Q92731 530 aa14.49□□□□□ -0.09
DNMT1-228ENST00000592705 TTC6Q86TZ1 520 aa14.49□□□□□ -0.09
DNMT1-228ENST00000592705 DDX21Q9NR30 783 aaKnown RBP eCLIP14.49□□□□□ -0.09
DNMT1-228ENST00000592705 SLC27A2O14975 620 aa14.48□□□□□ -0.09
DNMT1-228ENST00000592705 TNFAIP1Q13829 316 aa14.48□□□□□ -0.09
DNMT1-228ENST00000592705 SLC4A8Q2Y0W8 1093 aa14.48□□□□□ -0.09
DNMT1-228ENST00000592705 TDRD12Q587J7 1177 aaKnown RBP14.48□□□□□ -0.09
DNMT1-228ENST00000592705 SLC9C2Q5TAH2 1124 aa14.48□□□□□ -0.09
DNMT1-228ENST00000592705 NAA15Q9BXJ9 866 aaKnown RBP14.48□□□□□ -0.09
DNMT1-228ENST00000592705 CPA1P15085 419 aa14.48□□□□□ -0.09
DNMT1-228ENST00000592705 DCPSQ96C86 337 aaKnown RBP14.48□□□□□ -0.09
DNMT1-228ENST00000592705 ARFGAP3Q9NP61 516 aa14.48□□□□□ -0.09
DNMT1-228ENST00000592705 ZHX1Q9UKY1 873 aaPredicted RBP14.48□□□□□ -0.09
DNMT1-228ENST00000592705 CSADQ9Y600 493 aa14.48□□□□□ -0.09
DNMT1-228ENST00000592705 RRAGBQ5VZM2 374 aa14.48□□□□□ -0.09
DNMT1-228ENST00000592705 TAX1BP1Q86VP1 789 aa14.48□□□□□ -0.09
DNMT1-228ENST00000592705 FAM160A1Q05DH4 1040 aa14.48□□□□□ -0.09
DNMT1-228ENST00000592705 SEPT7Q16181 437 aaKnown RBP14.48□□□□□ -0.09
DNMT1-228ENST00000592705 HSPA4P34932 840 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms