RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	KCNJ4	P48050	445 aa		18.37	■□□□□ 0.53
DDX39A-209	ENST00000589318	EZH2	Q15910	746 aa	Known RBP	18.37	■□□□□ 0.53
DDX39A-209	ENST00000589318	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	18.37	■□□□□ 0.53
DDX39A-209	ENST00000589318	NLGN1	Q8N2Q7	840 aa		18.37	■□□□□ 0.53
DDX39A-209	ENST00000589318	APPBP2	Q92624	585 aa		18.37	■□□□□ 0.53
DDX39A-209	ENST00000589318	TM6SF1	Q9BZW5	370 aa		18.37	■□□□□ 0.53
DDX39A-209	ENST00000589318	QSER1	Q2KHR3	1735 aa		18.37	■□□□□ 0.53
DDX39A-209	ENST00000589318	COL1A1	P02452	1464 aa	Predicted RBP	18.37	■□□□□ 0.53
DDX39A-209	ENST00000589318	GYG1	P46976	350 aa		18.37	■□□□□ 0.53
DDX39A-209	ENST00000589318	CCDC173	Q0VFZ6	552 aa		18.37	■□□□□ 0.53
DDX39A-209	ENST00000589318	TSGA10IP	Q3SY00	556 aa		18.37	■□□□□ 0.53
DDX39A-209	ENST00000589318	DSCC1	Q9BVC3	393 aa		18.37	■□□□□ 0.53
DDX39A-209	ENST00000589318	IRS2	Q9Y4H2	1338 aa		18.36	■□□□□ 0.53
DDX39A-209	ENST00000589318	FOXP2	O15409	715 aa		18.36	■□□□□ 0.53
DDX39A-209	ENST00000589318	KLRK1	P26718	216 aa		18.36	■□□□□ 0.53
DDX39A-209	ENST00000589318	EN1	Q05925	392 aa	Predicted RBP	18.36	■□□□□ 0.53
DDX39A-209	ENST00000589318	COL9A3	Q14050	684 aa	Predicted RBP	18.36	■□□□□ 0.53
DDX39A-209	ENST00000589318	FAM84B	Q96KN1	310 aa	Predicted RBP	18.36	■□□□□ 0.53
DDX39A-209	ENST00000589318	ANKRD2	Q9GZV1	360 aa		18.36	■□□□□ 0.53
DDX39A-209	ENST00000589318	PUS7L	Q9H0K6	701 aa	Known RBP	18.36	■□□□□ 0.53
DDX39A-209	ENST00000589318	ZSWIM6	Q9HCJ5	1215 aa		18.36	■□□□□ 0.53
DDX39A-209	ENST00000589318	CIZ1	Q9ULV3	898 aa	Predicted RBP	18.36	■□□□□ 0.53
DDX39A-209	ENST00000589318	MYH13	Q9UKX3	1938 aa		18.36	■□□□□ 0.53
DDX39A-209	ENST00000589318	TCRBV5S4A2T	A0A5A2	114 aa		18.35	■□□□□ 0.53
DDX39A-209	ENST00000589318	HSPD1	P10809	573 aa	Known RBP	18.35	■□□□□ 0.53
DDX39A-209	ENST00000589318	CPA1	P15085	419 aa		18.35	■□□□□ 0.53
DDX39A-209	ENST00000589318	ZKSCAN1	P17029	563 aa	Predicted RBP	18.35	■□□□□ 0.53
DDX39A-209	ENST00000589318	MCM2	P49736	904 aa		18.35	■□□□□ 0.53
DDX39A-209	ENST00000589318	JAKMIP1	Q96N16	626 aa	Known RBP	18.35	■□□□□ 0.53
DDX39A-209	ENST00000589318	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	18.35	■□□□□ 0.53	6e-8	■■■□□ 16.2
DDX39A-209	ENST00000589318	WWC3	Q9ULE0	1092 aa		18.35	■□□□□ 0.53
DDX39A-209	ENST00000589318		U3KPZ7	1027 aa	Predicted RBP	18.35	■□□□□ 0.53
DDX39A-209	ENST00000589318	IDH1	O75874	414 aa	Known RBP	18.35	■□□□□ 0.53
DDX39A-209	ENST00000589318	CAST	P20810	708 aa	Known RBP	18.35	■□□□□ 0.53
DDX39A-209	ENST00000589318	SLC9C2	Q5TAH2	1124 aa		18.35	■□□□□ 0.53
DDX39A-209	ENST00000589318	TMX3	Q96JJ7	454 aa		18.35	■□□□□ 0.53
DDX39A-209	ENST00000589318	OFD1	O75665	1012 aa		18.34	■□□□□ 0.53
DDX39A-209	ENST00000589318	PDE6A	P16499	860 aa		18.34	■□□□□ 0.53
DDX39A-209	ENST00000589318	HOXA10	P31260	410 aa	Predicted RBP	18.34	■□□□□ 0.53
DDX39A-209	ENST00000589318	UBE3C	Q15386	1083 aa		18.34	■□□□□ 0.53
DDX39A-209	ENST00000589318	WASHC4	Q2M389	1173 aa		18.34	■□□□□ 0.53
DDX39A-209	ENST00000589318	RNF20	Q5VTR2	975 aa		18.34	■□□□□ 0.53
DDX39A-209	ENST00000589318	ZSCAN25	Q6NSZ9	544 aa		18.34	■□□□□ 0.53
DDX39A-209	ENST00000589318	FBXO33	Q7Z6M2	555 aa		18.34	■□□□□ 0.53
DDX39A-209	ENST00000589318	RPGR	Q92834	1020 aa	Known RBP	18.34	■□□□□ 0.53
DDX39A-209	ENST00000589318	FOXD4L1	Q9NU39	408 aa		18.34	■□□□□ 0.53
DDX39A-209	ENST00000589318	LAMA4	Q16363	1823 aa		18.34	■□□□□ 0.53
DDX39A-209	ENST00000589318	LRRC37A	A6NMS7	1700 aa		18.33	■□□□□ 0.53
DDX39A-209	ENST00000589318	CYP21A2	P08686	494 aa		18.33	■□□□□ 0.53
DDX39A-209	ENST00000589318	GZF1	Q9H116	711 aa	Predicted RBP	18.33	■□□□□ 0.53
DDX39A-209	ENST00000589318	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	18.33	■□□□□ 0.53
DDX39A-209	ENST00000589318	HS1BP3	Q53T59	392 aa		18.33	■□□□□ 0.52
DDX39A-209	ENST00000589318	PPP1R9B	Q96SB3	815 aa		18.33	■□□□□ 0.52
DDX39A-209	ENST00000589318	COL11A2	P13942	1736 aa	Predicted RBP	18.32	■□□□□ 0.52
DDX39A-209	ENST00000589318	ZNF532	Q9HCE3	1301 aa		18.32	■□□□□ 0.52
DDX39A-209	ENST00000589318	CUL4A	Q13619	759 aa		18.32	■□□□□ 0.52
DDX39A-209	ENST00000589318	CAVIN4	Q5BKX8	364 aa		18.32	■□□□□ 0.52
DDX39A-209	ENST00000589318	RUFY3	Q7L099	469 aa		18.32	■□□□□ 0.52
DDX39A-209	ENST00000589318	ZSCAN30	Q86W11	494 aa		18.32	■□□□□ 0.52
DDX39A-209	ENST00000589318	ANP32B	Q92688	251 aa	Known RBP	18.32	■□□□□ 0.52
DDX39A-209	ENST00000589318	GBP4	Q96PP9	640 aa		18.32	■□□□□ 0.52
DDX39A-209	ENST00000589318	LTBP1	Q14766	1721 aa		18.32	■□□□□ 0.52
DDX39A-209	ENST00000589318	GPAA1	O43292	621 aa		18.31	■□□□□ 0.52
DDX39A-209	ENST00000589318	MMP10	P09238	476 aa		18.31	■□□□□ 0.52
DDX39A-209	ENST00000589318	AK2	P54819	239 aa		18.31	■□□□□ 0.52
DDX39A-209	ENST00000589318	SLC15A2	Q16348	729 aa		18.31	■□□□□ 0.52
DDX39A-209	ENST00000589318	TXNRD3	Q86VQ6	643 aa		18.31	■□□□□ 0.52
DDX39A-209	ENST00000589318	RBM17	Q96I25	401 aa	Known RBP	18.31	■□□□□ 0.52
DDX39A-209	ENST00000589318	CACNA1S	Q13698	1873 aa		18.31	■□□□□ 0.52
DDX39A-209	ENST00000589318		A0A0G2JLW4	131 aa		18.31	■□□□□ 0.52
DDX39A-209	ENST00000589318	BRIP1	Q9BX63	1249 aa		18.31	■□□□□ 0.52
DDX39A-209	ENST00000589318	GNL3L	Q9NVN8	582 aa	Known RBP	18.31	■□□□□ 0.52
DDX39A-209	ENST00000589318	PRDM4	Q9UKN5	801 aa		18.31	■□□□□ 0.52
DDX39A-209	ENST00000589318	CYP46A1	Q9Y6A2	500 aa		18.31	■□□□□ 0.52
DDX39A-209	ENST00000589318	NOL8	Q76FK4	1167 aa	Known RBP	18.3	■□□□□ 0.52
DDX39A-209	ENST00000589318	ZGPAT	Q8N5A5	531 aa	Known RBP	18.3	■□□□□ 0.52
DDX39A-209	ENST00000589318	CRAMP1	Q96RY5	1269 aa		18.3	■□□□□ 0.52
DDX39A-209	ENST00000589318	XDH	P47989	1333 aa		18.3	■□□□□ 0.52
DDX39A-209	ENST00000589318	ZBTB22	O15209	634 aa		18.29	■□□□□ 0.52
DDX39A-209	ENST00000589318	PSMA5	P28066	241 aa		18.29	■□□□□ 0.52
DDX39A-209	ENST00000589318	MAP3K12	Q12852	859 aa		18.29	■□□□□ 0.52
DDX39A-209	ENST00000589318	MSL1	Q68DK7	614 aa		18.29	■□□□□ 0.52
DDX39A-209	ENST00000589318	STOX1	Q6ZVD7	989 aa		18.29	■□□□□ 0.52
DDX39A-209	ENST00000589318	LEMD3	Q9Y2U8	911 aa		18.29	■□□□□ 0.52
DDX39A-209	ENST00000589318	SEMA3E	O15041	775 aa		18.29	■□□□□ 0.52
DDX39A-209	ENST00000589318	KRT32	Q14532	448 aa		18.29	■□□□□ 0.52
DDX39A-209	ENST00000589318	SMAP1	Q8IYB5	467 aa	Predicted RBP	18.29	■□□□□ 0.52
DDX39A-209	ENST00000589318	MAGEB6	Q8N7X4	407 aa		18.29	■□□□□ 0.52
DDX39A-209	ENST00000589318	PDRG1	Q9NUG6	133 aa		18.29	■□□□□ 0.52
DDX39A-209	ENST00000589318	PDS5A	Q29RF7	1337 aa	Known RBP	18.29	■□□□□ 0.52
DDX39A-209	ENST00000589318	RPS6KB1	P23443	525 aa		18.28	■□□□□ 0.52
DDX39A-209	ENST00000589318	HIBADH	P31937	336 aa	Known RBP	18.28	■□□□□ 0.52
DDX39A-209	ENST00000589318	TTLL5	Q6EMB2	1281 aa		18.28	■□□□□ 0.52
DDX39A-209	ENST00000589318	VPS37D	Q86XT2	251 aa		18.28	■□□□□ 0.52
DDX39A-209	ENST00000589318	ANKIB1	Q9P2G1	1089 aa		18.28	■□□□□ 0.52
DDX39A-209	ENST00000589318	DENND2A	Q9ULE3	1009 aa		18.28	■□□□□ 0.52
DDX39A-209	ENST00000589318	BBOX1	O75936	387 aa		18.27	■□□□□ 0.52
DDX39A-209	ENST00000589318	GPSM2	P81274	684 aa		18.27	■□□□□ 0.52
DDX39A-209	ENST00000589318	C15orf52	Q6ZUT6	534 aa	Known RBP	18.27	■□□□□ 0.52
DDX39A-209	ENST00000589318	PARP3	Q9Y6F1	533 aa		18.27	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms