RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 GPSM2P81274 684 aa12.26□□□□□ -0.45
MKS1-212ENST00000583577 PROSER3Q2NL68 480 aa12.26□□□□□ -0.45
MKS1-212ENST00000583577 RSBN1LQ6PCB5 846 aaPredicted RBP12.26□□□□□ -0.45
MKS1-212ENST00000583577 DEFB123Q8N688 67 aa12.26□□□□□ -0.45
MKS1-212ENST00000583577 SH3TC2Q8TF17 1288 aa12.26□□□□□ -0.45
MKS1-212ENST00000583577 ZNF428Q96B54 188 aa12.26□□□□□ -0.45
MKS1-212ENST00000583577 CHMP4BQ9H444 224 aaKnown RBP12.26□□□□□ -0.45
MKS1-212ENST00000583577 RWDD1Q9H446 243 aaPredicted RBP12.26□□□□□ -0.45
MKS1-212ENST00000583577 ANGEL1Q9UNK9 670 aaKnown RBP12.26□□□□□ -0.45
MKS1-212ENST00000583577 USP17L8P0C7I0 530 aa12.25□□□□□ -0.45
MKS1-212ENST00000583577 AIMP1Q12904 312 aaKnown RBP12.25□□□□□ -0.45
MKS1-212ENST00000583577 NBPF9Q3BBW0 867 aa12.25□□□□□ -0.45
MKS1-212ENST00000583577 Q7L0L9 218 aa12.25□□□□□ -0.45
MKS1-212ENST00000583577 TMC4Q7Z404 712 aa12.25□□□□□ -0.45
MKS1-212ENST00000583577 AGBL3Q8NEM8 1001 aa12.25□□□□□ -0.45
MKS1-212ENST00000583577 XAGE3Q8WTP9 111 aa12.25□□□□□ -0.45
MKS1-212ENST00000583577 SLC10A4Q96EP9 437 aa12.25□□□□□ -0.45
MKS1-212ENST00000583577 FZD1Q9UP38 647 aa12.25□□□□□ -0.45
MKS1-212ENST00000583577 STXBP5LQ9Y2K9 1186 aa12.25□□□□□ -0.45
MKS1-212ENST00000583577 NR2E3Q9Y5X4 410 aa12.25□□□□□ -0.45
MKS1-212ENST00000583577 A0A1W2PPC1 479 aa12.24□□□□□ -0.45
MKS1-212ENST00000583577 ZNF646O15015 1829 aaPredicted RBP12.24□□□□□ -0.45
MKS1-212ENST00000583577 VAMP4O75379 141 aa12.24□□□□□ -0.45
MKS1-212ENST00000583577 RARSP54136 660 aaKnown RBP12.24□□□□□ -0.45
MKS1-212ENST00000583577 GSE1Q14687 1217 aa12.24□□□□□ -0.45
MKS1-212ENST00000583577 OTUD7BQ6GQQ9 843 aa12.24□□□□□ -0.45
MKS1-212ENST00000583577 ANKRD13DQ6ZTN6 518 aa12.24□□□□□ -0.45
MKS1-212ENST00000583577 COPS6Q7L5N1 327 aa12.24□□□□□ -0.45
MKS1-212ENST00000583577 LRP10Q7Z4F1 713 aa12.24□□□□□ -0.45
MKS1-212ENST00000583577 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.24□□□□□ -0.45
MKS1-212ENST00000583577 HTATIP2Q9BUP3 242 aa12.24□□□□□ -0.45
MKS1-212ENST00000583577 ZC3H12CQ9C0D7 883 aaKnown RBP12.24□□□□□ -0.45
MKS1-212ENST00000583577 PRDM6Q9NQX0 595 aa12.24□□□□□ -0.45
MKS1-212ENST00000583577 ZBTB7BO15156 539 aaPredicted RBP12.23□□□□□ -0.45
MKS1-212ENST00000583577 ARHGEF6Q15052 776 aa12.23□□□□□ -0.45
MKS1-212ENST00000583577 LDLRAD1Q5T700 205 aa12.23□□□□□ -0.45
MKS1-212ENST00000583577 TBC1D16Q8TBP0 767 aa12.23□□□□□ -0.45
MKS1-212ENST00000583577 CELF1Q92879 486 aaKnown RBP12.23□□□□□ -0.45
MKS1-212ENST00000583577 SHISA4Q96DD7 197 aa12.23□□□□□ -0.45
MKS1-212ENST00000583577 WNK4Q96J92 1243 aa12.23□□□□□ -0.45
MKS1-212ENST00000583577 DDX58O95786 925 aaKnown RBP12.22□□□□□ -0.45
MKS1-212ENST00000583577 SLC4A2P04920 1241 aa12.22□□□□□ -0.45
MKS1-212ENST00000583577 CLMNQ96JQ2 1002 aa12.22□□□□□ -0.45
MKS1-212ENST00000583577 PHAXQ9H814 394 aaKnown RBP12.22□□□□□ -0.45
MKS1-212ENST00000583577 STAP2Q9UGK3 403 aa12.22□□□□□ -0.45
MKS1-212ENST00000583577 NCOR1O75376 2440 aa12.21□□□□□ -0.45
MKS1-212ENST00000583577 BCAR3O75815 825 aa12.21□□□□□ -0.45
MKS1-212ENST00000583577 ZBTB48P10074 688 aaPredicted RBP12.21□□□□□ -0.45
MKS1-212ENST00000583577 NFKBIBQ15653 356 aa12.21□□□□□ -0.45
MKS1-212ENST00000583577 HSP90AB3PQ58FF7 597 aa12.21□□□□□ -0.45
MKS1-212ENST00000583577 PLBD2Q8NHP8 589 aa12.21□□□□□ -0.45
MKS1-212ENST00000583577 GMLQ99445 158 aa12.21□□□□□ -0.45
MKS1-212ENST00000583577 TRMT112Q9UI30 125 aaKnown RBP12.21□□□□□ -0.45
MKS1-212ENST00000583577 COL4A1P02462 1669 aa12.21□□□□□ -0.45
MKS1-212ENST00000583577 ALPK3Q96L96 1907 aa12.21□□□□□ -0.46
MKS1-212ENST00000583577 MTFR1Q15390 333 aa12.2□□□□□ -0.46
MKS1-212ENST00000583577 ZKSCAN2Q63HK3 967 aa12.2□□□□□ -0.46
MKS1-212ENST00000583577 RIC3Q7Z5B4 369 aa12.2□□□□□ -0.46
MKS1-212ENST00000583577 SH3TC1Q8TE82 1336 aa12.19□□□□□ -0.46
MKS1-212ENST00000583577 MUC3AQ02505 3323 aa12.19□□□□□ -0.46
MKS1-212ENST00000583577 WNT10BO00744 389 aa12.19□□□□□ -0.46
MKS1-212ENST00000583577 UFL1O94874 794 aa12.19□□□□□ -0.46
MKS1-212ENST00000583577 SASH1O94885 1247 aa12.19□□□□□ -0.46
MKS1-212ENST00000583577 MVPQ14764 893 aaKnown RBP12.19□□□□□ -0.46
MKS1-212ENST00000583577 NLRP10Q86W26 655 aa12.19□□□□□ -0.46
MKS1-212ENST00000583577 PTPN18Q99952 460 aa12.19□□□□□ -0.46
MKS1-212ENST00000583577 MTMR10Q9NXD2 777 aa12.19□□□□□ -0.46
MKS1-212ENST00000583577 MYH3P11055 1940 aa12.18□□□□□ -0.46
MKS1-212ENST00000583577 USP17L3A6NCW0 530 aa12.18□□□□□ -0.46
MKS1-212ENST00000583577 USP17L4A6NCW7 530 aa12.18□□□□□ -0.46
MKS1-212ENST00000583577 IPO8O15397 1037 aaKnown RBP12.18□□□□□ -0.46
MKS1-212ENST00000583577 EVI5O60447 810 aa12.18□□□□□ -0.46
MKS1-212ENST00000583577 ECM2O94769 699 aaPredicted RBP12.18□□□□□ -0.46
MKS1-212ENST00000583577 COL9A1P20849 921 aa12.18□□□□□ -0.46
MKS1-212ENST00000583577 FLIIQ13045 1269 aa12.18□□□□□ -0.46
MKS1-212ENST00000583577 HDAC1Q13547 482 aaPredicted RBP12.18□□□□□ -0.46
MKS1-212ENST00000583577 GPR153Q6NV75 609 aa12.18□□□□□ -0.46
MKS1-212ENST00000583577 USP17L1Q7RTZ2 530 aa12.18□□□□□ -0.46
MKS1-212ENST00000583577 ANKIB1Q9P2G1 1089 aa12.18□□□□□ -0.46
MKS1-212ENST00000583577 DDX19BQ9UMR2 479 aa12.18□□□□□ -0.46
MKS1-212ENST00000583577 KIF16BQ96L93 1317 aa12.17□□□□□ -0.46
MKS1-212ENST00000583577 IGHDP01880 384 aa12.17□□□□□ -0.46
MKS1-212ENST00000583577 GJA5P36382 358 aa12.17□□□□□ -0.46
MKS1-212ENST00000583577 RGS3P49796 1198 aa12.17□□□□□ -0.46
MKS1-212ENST00000583577 FKBP5Q13451 457 aaPredicted RBP12.17□□□□□ -0.46
MKS1-212ENST00000583577 TAF1CQ15572 869 aaPredicted RBP12.17□□□□□ -0.46
MKS1-212ENST00000583577 ALDH1L2Q3SY69 923 aa12.17□□□□□ -0.46
MKS1-212ENST00000583577 KSR2Q6VAB6 950 aa12.17□□□□□ -0.46
MKS1-212ENST00000583577 G2E3Q7L622 706 aa12.17□□□□□ -0.46
MKS1-212ENST00000583577 APOBEC3FQ8IUX4 373 aaKnown RBP12.17□□□□□ -0.46
MKS1-212ENST00000583577 OGFOD1Q8N543 542 aa12.17□□□□□ -0.46
MKS1-212ENST00000583577 NKX2-3Q8TAU0 364 aa12.17□□□□□ -0.46
MKS1-212ENST00000583577 FBXW7Q969H0 707 aa12.17□□□□□ -0.46
MKS1-212ENST00000583577 MXD3Q9BW11 206 aa12.17□□□□□ -0.46
MKS1-212ENST00000583577 OTOFQ9HC10 1997 aa12.16□□□□□ -0.46
MKS1-212ENST00000583577 PI4KAP2A4QPH2 592 aa12.16□□□□□ -0.46
MKS1-212ENST00000583577 UBE2Q1Q7Z7E8 422 aa12.16□□□□□ -0.46
MKS1-212ENST00000583577 PI4KAP1Q8N8J0 262 aa12.16□□□□□ -0.46
MKS1-212ENST00000583577 ARHGAP39Q9C0H5 1083 aa12.16□□□□□ -0.46
MKS1-212ENST00000583577 ZFYVE28Q9HCC9 887 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms