RNA–Protein interactions for RNA: ENST00000583483.1

CDH8-210, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 380 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-210ENST00000583483 KRT76Q01546 638 aa8.9□□□□□ -0.98
CDH8-210ENST00000583483 RNFT1Q5M7Z0 435 aa8.9□□□□□ -0.98
CDH8-210ENST00000583483 WAPLQ7Z5K2 1190 aa8.9□□□□□ -0.98
CDH8-210ENST00000583483 SUSD3Q96L08 255 aa8.9□□□□□ -0.98
CDH8-210ENST00000583483 NDFIP2Q9NV92 336 aa8.9□□□□□ -0.98
CDH8-210ENST00000583483 COL3A1P02461 1466 aaPredicted RBP8.89□□□□□ -0.99
CDH8-210ENST00000583483 DCCP43146 1447 aa8.89□□□□□ -0.99
CDH8-210ENST00000583483 RGPD8O14715 1765 aaPredicted RBP8.89□□□□□ -0.99
CDH8-210ENST00000583483 BNIP3LO60238 219 aa8.89□□□□□ -0.99
CDH8-210ENST00000583483 GMPRP36959 345 aa8.89□□□□□ -0.99
CDH8-210ENST00000583483 GAS6Q14393 721 aa8.89□□□□□ -0.99
CDH8-210ENST00000583483 WDR43Q15061 677 aaKnown RBP eCLIP8.89□□□□□ -0.99
CDH8-210ENST00000583483 MORC1Q86VD1 984 aa8.89□□□□□ -0.99
CDH8-210ENST00000583483 PGBD3Q8N328 593 aa8.89□□□□□ -0.99
CDH8-210ENST00000583483 NGEFQ8N5V2 710 aa8.89□□□□□ -0.99
CDH8-210ENST00000583483 RHPN1Q8TCX5 695 aa8.89□□□□□ -0.99
CDH8-210ENST00000583483 SLC26A8Q96RN1 970 aa8.89□□□□□ -0.99
CDH8-210ENST00000583483 DMGDHQ9UI17 866 aaKnown RBP8.89□□□□□ -0.99
CDH8-210ENST00000583483 AMOTL2Q9Y2J4 779 aa8.89□□□□□ -0.99
CDH8-210ENST00000583483 CHMP3Q9Y3E7 222 aa8.89□□□□□ -0.99
CDH8-210ENST00000583483 IQSEC2Q5JU85 1478 aa8.89□□□□□ -0.99
CDH8-210ENST00000583483 USP6P35125 1406 aa8.88□□□□□ -0.99
CDH8-210ENST00000583483 NCOA3Q9Y6Q9 1424 aa8.88□□□□□ -0.99
CDH8-210ENST00000583483 H7C1W4 665 aa8.88□□□□□ -0.99
CDH8-210ENST00000583483 TNFRSF10BO14763 440 aa8.88□□□□□ -0.99
CDH8-210ENST00000583483 GRIN2CQ14957 1233 aa8.88□□□□□ -0.99
CDH8-210ENST00000583483 RTN1Q16799 776 aa8.88□□□□□ -0.99
CDH8-210ENST00000583483 NLRP8Q86W28 1048 aa8.88□□□□□ -0.99
CDH8-210ENST00000583483 COL26A1Q96A83 441 aa8.88□□□□□ -0.99
CDH8-210ENST00000583483 NUDT16Q96DE0 195 aaKnown RBP8.88□□□□□ -0.99
CDH8-210ENST00000583483 MYO19Q96H55 970 aa8.88□□□□□ -0.99
CDH8-210ENST00000583483 CFAP53Q96M91 514 aa8.88□□□□□ -0.99
CDH8-210ENST00000583483 LMTK3Q96Q04 1460 aa8.88□□□□□ -0.99
CDH8-210ENST00000583483 OVOS2A0A0J9YW53 1432 aa8.88□□□□□ -0.99
CDH8-210ENST00000583483 OVOS2Q6IE36 1432 aa8.88□□□□□ -0.99
CDH8-210ENST00000583483 AATKQ6ZMQ8 1374 aa8.87□□□□□ -0.99
CDH8-210ENST00000583483 MAP2P11137 1827 aaKnown RBP8.87□□□□□ -0.99
CDH8-210ENST00000583483 DGKZQ13574 1117 aa8.87□□□□□ -0.99
CDH8-210ENST00000583483 SLC16A10Q8TF71 515 aa8.87□□□□□ -0.99
CDH8-210ENST00000583483 VTI1AQ96AJ9 217 aa8.87□□□□□ -0.99
CDH8-210ENST00000583483 GMCL1Q96IK5 515 aa8.87□□□□□ -0.99
CDH8-210ENST00000583483 STRN4Q9NRL3 753 aa8.87□□□□□ -0.99
CDH8-210ENST00000583483 PIK3C2AO00443 1686 aa8.87□□□□□ -0.99
CDH8-210ENST00000583483 TTC21AQ8NDW8 1320 aa8.86□□□□□ -0.99
CDH8-210ENST00000583483 PRR36Q9H6K5 1346 aa8.86□□□□□ -0.99
CDH8-210ENST00000583483 MARF1Q9Y4F3 1742 aaKnown RBP8.86□□□□□ -0.99
CDH8-210ENST00000583483 ZBTB39O15060 712 aa8.86□□□□□ -0.99
CDH8-210ENST00000583483 KCNA6P17658 529 aa8.86□□□□□ -0.99
CDH8-210ENST00000583483 TNP2Q05952 138 aa8.86□□□□□ -0.99
CDH8-210ENST00000583483 PDE3BQ13370 1112 aa8.86□□□□□ -0.99
CDH8-210ENST00000583483 CNGB1Q14028 1251 aaPredicted RBP8.86□□□□□ -0.99
CDH8-210ENST00000583483 EFHC2Q5JST6 749 aa8.86□□□□□ -0.99
CDH8-210ENST00000583483 IRF7Q92985 503 aa8.86□□□□□ -0.99
CDH8-210ENST00000583483 ABHD17AQ96GS6 310 aa8.86□□□□□ -0.99
CDH8-210ENST00000583483 COL25A1Q9BXS0 654 aaPredicted RBP8.86□□□□□ -0.99
CDH8-210ENST00000583483 PCDHGC4Q9Y5F7 938 aa8.86□□□□□ -0.99
CDH8-210ENST00000583483 SSH2Q76I76 1423 aa8.86□□□□□ -0.99
CDH8-210ENST00000583483 STRCQ7RTU9 1775 aa8.86□□□□□ -0.99
CDH8-210ENST00000583483 PHRF1Q9P1Y6 1649 aaKnown RBP8.85□□□□□ -0.99
CDH8-210ENST00000583483 C2CD2LO14523 706 aa8.85□□□□□ -0.99
CDH8-210ENST00000583483 ATXN7O15265 892 aaPredicted RBP8.85□□□□□ -0.99
CDH8-210ENST00000583483 GRNP28799 593 aaKnown RBP8.85□□□□□ -0.99
CDH8-210ENST00000583483 CTBSQ01459 385 aa8.85□□□□□ -0.99
CDH8-210ENST00000583483 MTMR3Q13615 1198 aa8.85□□□□□ -0.99
CDH8-210ENST00000583483 LBRQ14739 615 aaKnown RBP8.85□□□□□ -0.99
CDH8-210ENST00000583483 C11orf91Q3C1V1 193 aa8.85□□□□□ -0.99
CDH8-210ENST00000583483 GTF3C2Q8WUA4 911 aaPredicted RBP8.85□□□□□ -0.99
CDH8-210ENST00000583483 TRAIPQ9BWF2 469 aa8.85□□□□□ -0.99
CDH8-210ENST00000583483 STRCP1A6NGW2 1772 aa8.85□□□□□ -0.99
CDH8-210ENST00000583483 PNPLA6Q8IY17 1366 aa8.85□□□□□ -0.99
CDH8-210ENST00000583483 OPLAHO14841 1288 aa8.84□□□□□ -0.99
CDH8-210ENST00000583483 PTCD1O75127 700 aaKnown RBP8.84□□□□□ -0.99
CDH8-210ENST00000583483 SFSWAPQ12872 951 aaKnown RBP8.84□□□□□ -0.99
CDH8-210ENST00000583483 C16orf46Q6P387 395 aa8.84□□□□□ -0.99
CDH8-210ENST00000583483 ETFBKMTQ8IXQ9 262 aa8.84□□□□□ -0.99
CDH8-210ENST00000583483 DNMT3AQ9Y6K1 912 aaPredicted RBP8.84□□□□□ -0.99
CDH8-210ENST00000583483 FYB1O15117 783 aa8.83□□□□□ -1
CDH8-210ENST00000583483 NEFLP07196 543 aa8.83□□□□□ -1
CDH8-210ENST00000583483 MAPTP10636 758 aaKnown RBP8.83□□□□□ -1
CDH8-210ENST00000583483 IFT43Q96FT9 208 aa8.83□□□□□ -1
CDH8-210ENST00000583483 CFHR5Q9BXR6 569 aa8.83□□□□□ -1
CDH8-210ENST00000583483 ANO2Q9NQ90 1003 aa8.83□□□□□ -1
CDH8-210ENST00000583483 NUDCQ9Y266 331 aa8.83□□□□□ -1
CDH8-210ENST00000583483 GPC6Q9Y625 555 aaPredicted RBP8.83□□□□□ -1
CDH8-210ENST00000583483 USP31Q70CQ4 1352 aa8.83□□□□□ -1
CDH8-210ENST00000583483 TRPM3Q9HCF6 1732 aaPredicted RBP8.83□□□□□ -1
CDH8-210ENST00000583483 DCDC2BA2VCK2 349 aa8.82□□□□□ -1
CDH8-210ENST00000583483 EFSO43281 561 aa8.82□□□□□ -1
CDH8-210ENST00000583483 ECM1Q16610 540 aa8.82□□□□□ -1
CDH8-210ENST00000583483 SAMD5Q5TGI4 173 aa8.82□□□□□ -1
CDH8-210ENST00000583483 BTLAQ7Z6A9 289 aa8.82□□□□□ -1
CDH8-210ENST00000583483 CNTNAP3BQ96NU0 1288 aa8.82□□□□□ -1
CDH8-210ENST00000583483 CNTNAP3Q9BZ76 1288 aa8.82□□□□□ -1
CDH8-210ENST00000583483 NEUROD4Q9HD90 331 aa8.82□□□□□ -1
CDH8-210ENST00000583483 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.82□□□□□ -1
CDH8-210ENST00000583483 GJA3Q9Y6H8 435 aa8.82□□□□□ -1
CDH8-210ENST00000583483 KIF24Q5T7B8 1368 aa8.82□□□□□ -1
CDH8-210ENST00000583483 RGPD1P0DJD0 1748 aa8.82□□□□□ -1
CDH8-210ENST00000583483 XIRP1Q702N8 1843 aaKnown RBP8.82□□□□□ -1
CDH8-210ENST00000583483 ACEP12821 1306 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms