RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 JAG2Q9Y219 1238 aa6.31□□□□□ -1.4
TOP2A-202ENST00000577541 SCNN1AP37088 669 aa6.3□□□□□ -1.4
TOP2A-202ENST00000577541 FAM26DQ5JW98 314 aa6.3□□□□□ -1.4
TOP2A-202ENST00000577541 LRRC56Q8IYG6 542 aaPredicted RBP6.3□□□□□ -1.4
TOP2A-202ENST00000577541 TMPRSS13Q9BYE2 586 aa6.3□□□□□ -1.4
TOP2A-202ENST00000577541 RC3H2Q9HBD1 1191 aaKnown RBP6.3□□□□□ -1.4
TOP2A-202ENST00000577541 LMCD1Q9NZU5 365 aa6.3□□□□□ -1.4
TOP2A-202ENST00000577541 LRRC10BA6NIK2 292 aa6.29□□□□□ -1.4
TOP2A-202ENST00000577541 ZSCAN22P10073 491 aaPredicted RBP6.29□□□□□ -1.4
TOP2A-202ENST00000577541 DRD2P14416 443 aa6.29□□□□□ -1.4
TOP2A-202ENST00000577541 CYP27A1Q02318 531 aa6.29□□□□□ -1.4
TOP2A-202ENST00000577541 VTI1AQ96AJ9 217 aa6.29□□□□□ -1.4
TOP2A-202ENST00000577541 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.29□□□□□ -1.4
TOP2A-202ENST00000577541 KIF4AO95239 1232 aa6.28□□□□□ -1.4
TOP2A-202ENST00000577541 DLGAP3O95886 979 aa6.28□□□□□ -1.4
TOP2A-202ENST00000577541 CYP2E1P05181 493 aaPredicted RBP6.28□□□□□ -1.4
TOP2A-202ENST00000577541 ARL4DP49703 201 aa6.28□□□□□ -1.4
TOP2A-202ENST00000577541 MCM6Q14566 821 aa6.28□□□□□ -1.4
TOP2A-202ENST00000577541 CEP120Q8N960 986 aa6.28□□□□□ -1.4
TOP2A-202ENST00000577541 SLC7A3Q8WY07 619 aa6.28□□□□□ -1.4
TOP2A-202ENST00000577541 EZH1Q92800 747 aaPredicted RBP6.28□□□□□ -1.4
TOP2A-202ENST00000577541 YIPF2Q9BWQ6 316 aa6.28□□□□□ -1.4
TOP2A-202ENST00000577541 RNASE1P07998 156 aaKnown RBP6.27□□□□□ -1.41
TOP2A-202ENST00000577541 DPYDQ12882 1025 aa6.27□□□□□ -1.41
TOP2A-202ENST00000577541 ECM1Q16610 540 aa6.27□□□□□ -1.41
TOP2A-202ENST00000577541 CRTC2Q53ET0 693 aaPredicted RBP6.27□□□□□ -1.41
TOP2A-202ENST00000577541 TTC39BQ5VTQ0 682 aaPredicted RBP6.27□□□□□ -1.41
TOP2A-202ENST00000577541 ZNF765Q7L2R6 523 aa6.27□□□□□ -1.41
TOP2A-202ENST00000577541 POM121Q96HA1 1249 aa6.27□□□□□ -1.41
TOP2A-202ENST00000577541 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.27□□□□□ -1.41
TOP2A-202ENST00000577541 UBAP1LF5GYI3 381 aa6.26□□□□□ -1.41
TOP2A-202ENST00000577541 FOXO3O43524 673 aa6.26□□□□□ -1.41
TOP2A-202ENST00000577541 TSPAN15O95858 294 aa6.26□□□□□ -1.41
TOP2A-202ENST00000577541 FUT4P22083 530 aa6.26□□□□□ -1.41
TOP2A-202ENST00000577541 C19orf57Q0VDD7 668 aa6.26□□□□□ -1.41
TOP2A-202ENST00000577541 ANKLE2Q86XL3 938 aa6.26□□□□□ -1.41
TOP2A-202ENST00000577541 WWC1Q8IX03 1113 aa6.26□□□□□ -1.41
TOP2A-202ENST00000577541 ETFBKMTQ8IXQ9 262 aa6.26□□□□□ -1.41
TOP2A-202ENST00000577541 MBNL3Q9NUK0 354 aaKnown RBP6.26□□□□□ -1.41
TOP2A-202ENST00000577541 FAM53CQ9NYF3 392 aa6.26□□□□□ -1.41
TOP2A-202ENST00000577541 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.26□□□□□ -1.41
TOP2A-202ENST00000577541 ADAMTS6Q9UKP5 1117 aa6.26□□□□□ -1.41
TOP2A-202ENST00000577541 WEE1P30291 646 aa6.25□□□□□ -1.41
TOP2A-202ENST00000577541 BNIP3Q12983 259 aa6.25□□□□□ -1.41
TOP2A-202ENST00000577541 COX20Q5RI15 118 aa6.25□□□□□ -1.41
TOP2A-202ENST00000577541 HDGFL1Q5TGJ6 251 aa6.25□□□□□ -1.41
TOP2A-202ENST00000577541 NCAPG2Q86XI2 1143 aa6.25□□□□□ -1.41
TOP2A-202ENST00000577541 C2CD4AQ8NCU7 369 aaPredicted RBP6.25□□□□□ -1.41
TOP2A-202ENST00000577541 MISP3Q96FF7 219 aa6.25□□□□□ -1.41
TOP2A-202ENST00000577541 PPP1R16BQ96T49 567 aa6.25□□□□□ -1.41
TOP2A-202ENST00000577541 ACPPP15309 386 aa6.24□□□□□ -1.41
TOP2A-202ENST00000577541 PI4K2BQ8TCG2 481 aa6.24□□□□□ -1.41
TOP2A-202ENST00000577541 NFKBIEO00221 500 aa6.23□□□□□ -1.41
TOP2A-202ENST00000577541 PTK7Q13308 1070 aa6.23□□□□□ -1.41
TOP2A-202ENST00000577541 MLANAQ16655 118 aa6.23□□□□□ -1.41
TOP2A-202ENST00000577541 EXOSC6Q5RKV6 272 aaKnown RBP6.23□□□□□ -1.41
TOP2A-202ENST00000577541 LARP1Q6PKG0 1096 aaKnown RBP6.23□□□□□ -1.41
TOP2A-202ENST00000577541 LRRN4CLQ8ND94 238 aa6.23□□□□□ -1.41
TOP2A-202ENST00000577541 USP26Q9BXU7 913 aa6.23□□□□□ -1.41
TOP2A-202ENST00000577541 LOC100289279A0A1B0GTE1 492 aa6.22□□□□□ -1.41
TOP2A-202ENST00000577541 TRPA1O75762 1119 aa6.22□□□□□ -1.41
TOP2A-202ENST00000577541 CD8BP10966 210 aa6.22□□□□□ -1.41
TOP2A-202ENST00000577541 SOX4Q06945 474 aaPredicted RBP6.22□□□□□ -1.41
TOP2A-202ENST00000577541 MAP7Q14244 749 aa6.22□□□□□ -1.41
TOP2A-202ENST00000577541 PIK3R5Q8WYR1 880 aa6.22□□□□□ -1.41
TOP2A-202ENST00000577541 HHIPQ96QV1 700 aa6.22□□□□□ -1.41
TOP2A-202ENST00000577541 CSRNP1Q96S65 589 aa6.21□□□□□ -1.42
TOP2A-202ENST00000577541 FNDC3AQ9Y2H6 1198 aaKnown RBP6.21□□□□□ -1.42
TOP2A-202ENST00000577541 A6NJR5 290 aa6.2□□□□□ -1.42
TOP2A-202ENST00000577541 SOX1O00570 391 aaPredicted RBP6.2□□□□□ -1.42
TOP2A-202ENST00000577541 NFICP08651 508 aa6.2□□□□□ -1.42
TOP2A-202ENST00000577541 CTSWP56202 376 aa6.2□□□□□ -1.42
TOP2A-202ENST00000577541 AMIGO3Q86WK7 504 aa6.2□□□□□ -1.42
TOP2A-202ENST00000577541 SAP130Q9H0E3 1048 aa6.2□□□□□ -1.42
TOP2A-202ENST00000577541 ABI2Q9NYB9 513 aaPredicted RBP6.2□□□□□ -1.42
TOP2A-202ENST00000577541 ZNF503-AS2A6NEH8 195 aa6.19□□□□□ -1.42
TOP2A-202ENST00000577541 INHBBP09529 407 aa6.19□□□□□ -1.42
TOP2A-202ENST00000577541 CD96P40200 585 aa6.19□□□□□ -1.42
TOP2A-202ENST00000577541 ZSWIM9Q86XI8 627 aa6.19□□□□□ -1.42
TOP2A-202ENST00000577541 FAM13BQ9NYF5 915 aa6.19□□□□□ -1.42
TOP2A-202ENST00000577541 SOX13Q9UN79 622 aa6.19□□□□□ -1.42
TOP2A-202ENST00000577541 OGFOD3Q6PK18 319 aa6.18□□□□□ -1.42
TOP2A-202ENST00000577541 SYDE1Q6ZW31 735 aaPredicted RBP6.18□□□□□ -1.42
TOP2A-202ENST00000577541 ANKMY2Q8IV38 441 aa6.18□□□□□ -1.42
TOP2A-202ENST00000577541 ARXQ96QS3 562 aa6.18□□□□□ -1.42
TOP2A-202ENST00000577541 KANSL3Q9P2N6 904 aa6.18□□□□□ -1.42
TOP2A-202ENST00000577541 TFIP11Q9UBB9 837 aaKnown RBP6.18□□□□□ -1.42
TOP2A-202ENST00000577541 VAV3Q9UKW4 847 aa6.18□□□□□ -1.42
TOP2A-202ENST00000577541 PDE2AO00408 941 aaPredicted RBP6.17□□□□□ -1.42
TOP2A-202ENST00000577541 RAB6AP20340 208 aa6.17□□□□□ -1.42
TOP2A-202ENST00000577541 BRD2P25440 801 aaKnown RBP6.17□□□□□ -1.42
TOP2A-202ENST00000577541 KCNMB1Q16558 191 aa6.17□□□□□ -1.42
TOP2A-202ENST00000577541 KANK4Q5T7N3 995 aaPredicted RBP6.17□□□□□ -1.42
TOP2A-202ENST00000577541 FLAD1Q8NFF5 587 aa6.17□□□□□ -1.42
TOP2A-202ENST00000577541 SEMA6CQ9H3T2 930 aa6.17□□□□□ -1.42
TOP2A-202ENST00000577541 MAFBQ9Y5Q3 323 aaPredicted RBP6.17□□□□□ -1.42
TOP2A-202ENST00000577541 DYNC1LI2O43237 492 aaPredicted RBP6.16□□□□□ -1.42
TOP2A-202ENST00000577541 KRT1P04264 644 aa6.16□□□□□ -1.42
TOP2A-202ENST00000577541 IKBKEQ14164 716 aa6.16□□□□□ -1.42
TOP2A-202ENST00000577541 SEZ6L2Q6UXD5 910 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms