RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 WASHC4Q2M389 1173 aa19.25■□□□□ 0.67
SMPD3-212ENST00000574662 VPS37DQ86XT2 251 aa19.25■□□□□ 0.67
SMPD3-212ENST00000574662 SPRYD3Q8NCJ5 442 aa19.25■□□□□ 0.67
SMPD3-212ENST00000574662 ZAP70P43403 619 aa19.24■□□□□ 0.67
SMPD3-212ENST00000574662 RASGRF1Q13972 1273 aa19.24■□□□□ 0.67
SMPD3-212ENST00000574662 DNAJC2Q99543 621 aaKnown RBP19.24■□□□□ 0.67
SMPD3-212ENST00000574662 ZC3H12CQ9C0D7 883 aaKnown RBP19.24■□□□□ 0.67
SMPD3-212ENST00000574662 HMG20BQ9P0W2 317 aa19.24■□□□□ 0.67
SMPD3-212ENST00000574662 MED23Q9ULK4 1368 aa19.24■□□□□ 0.67
SMPD3-212ENST00000574662 TRIM6-TRIM34B2RNG4 842 aa19.24■□□□□ 0.67
SMPD3-212ENST00000574662 FKBP4Q02790 459 aaKnown RBP eCLIP19.24■□□□□ 0.67
SMPD3-212ENST00000574662 GRIPAP1Q4V328 841 aa19.24■□□□□ 0.67
SMPD3-212ENST00000574662 TBC1D9Q6ZT07 1266 aa19.24■□□□□ 0.67
SMPD3-212ENST00000574662 RILPL2Q969X0 211 aa19.24■□□□□ 0.67
SMPD3-212ENST00000574662 GOLGA6L3A6NEY3 463 aa19.23■□□□□ 0.67
SMPD3-212ENST00000574662 SOGA3Q5TF21 947 aa19.23■□□□□ 0.67
SMPD3-212ENST00000574662 PSMD1Q99460 953 aa19.23■□□□□ 0.67
SMPD3-212ENST00000574662 CD209Q9NNX6 404 aa19.23■□□□□ 0.67
SMPD3-212ENST00000574662 ISY1Q9ULR0 285 aaKnown RBP19.23■□□□□ 0.67
SMPD3-212ENST00000574662 DOK7Q18PE1 504 aa19.22■□□□□ 0.67
SMPD3-212ENST00000574662 ZNF804AQ7Z570 1209 aa19.22■□□□□ 0.67
SMPD3-212ENST00000574662 SPATA5Q8NB90 893 aa19.22■□□□□ 0.67
SMPD3-212ENST00000574662 TDRD7Q8NHU6 1098 aaKnown RBP19.22■□□□□ 0.67
SMPD3-212ENST00000574662 EYA3Q99504 573 aa19.22■□□□□ 0.67
SMPD3-212ENST00000574662 GNL3LQ9NVN8 582 aaKnown RBP19.22■□□□□ 0.67
SMPD3-212ENST00000574662 FSD2A1L4K1 749 aa19.21■□□□□ 0.67
SMPD3-212ENST00000574662 GOLIM4O00461 696 aa19.21■□□□□ 0.67
SMPD3-212ENST00000574662 CYP2E1P05181 493 aaPredicted RBP19.21■□□□□ 0.67
SMPD3-212ENST00000574662 GBP4Q96PP9 640 aa19.21■□□□□ 0.67
SMPD3-212ENST00000574662 ZNF277Q9NRM2 450 aaPredicted RBP19.21■□□□□ 0.67
SMPD3-212ENST00000574662 NFKBIEO00221 500 aa19.21■□□□□ 0.67
SMPD3-212ENST00000574662 TRAK2O60296 914 aa19.21■□□□□ 0.67
SMPD3-212ENST00000574662 IL1R1P14778 569 aa19.21■□□□□ 0.67
SMPD3-212ENST00000574662 AOC3Q16853 763 aa19.21■□□□□ 0.67
SMPD3-212ENST00000574662 SUPT20HQ8NEM7 779 aa19.21■□□□□ 0.67
SMPD3-212ENST00000574662 PAG1Q9NWQ8 432 aa19.21■□□□□ 0.67
SMPD3-212ENST00000574662 AKAP11Q9UKA4 1901 aa19.21■□□□□ 0.67
SMPD3-212ENST00000574662 COL1A1P02452 1464 aaPredicted RBP19.2■□□□□ 0.66
SMPD3-212ENST00000574662 KIAA2012Q0VF49 1180 aa19.2■□□□□ 0.66
SMPD3-212ENST00000574662 EVI5LQ96CN4 794 aa19.2■□□□□ 0.66
SMPD3-212ENST00000574662 K7ELQ4 463 aaPredicted RBP19.19■□□□□ 0.66
SMPD3-212ENST00000574662 CNTROBQ8N137 903 aa19.19■□□□□ 0.66
SMPD3-212ENST00000574662 KIF2CQ99661 725 aa19.19■□□□□ 0.66
SMPD3-212ENST00000574662 COA1Q9GZY4 146 aa19.19■□□□□ 0.66
SMPD3-212ENST00000574662 DENND2AQ9ULE3 1009 aa19.19■□□□□ 0.66
SMPD3-212ENST00000574662 JAG2Q9Y219 1238 aa19.19■□□□□ 0.66
SMPD3-212ENST00000574662 DBNDD1Q9H9R9 158 aa19.19■□□□□ 0.66
SMPD3-212ENST00000574662 PIH1D3Q9NQM4 214 aaKnown RBP19.19■□□□□ 0.66
SMPD3-212ENST00000574662 KCNQ5Q9NR82 932 aa19.19■□□□□ 0.66
SMPD3-212ENST00000574662 SEMA3EO15041 775 aa19.18■□□□□ 0.66
SMPD3-212ENST00000574662 ZBTB22O15209 634 aa19.18■□□□□ 0.66
SMPD3-212ENST00000574662 PPIP5K2O43314 1243 aa19.18■□□□□ 0.66
SMPD3-212ENST00000574662 CHGBP05060 677 aa19.18■□□□□ 0.66
SMPD3-212ENST00000574662 YBX3P16989 372 aaKnown RBP eCLIP19.18■□□□□ 0.66
SMPD3-212ENST00000574662 PRELPP51888 382 aa19.18■□□□□ 0.66
SMPD3-212ENST00000574662 CHAF1AQ13111 956 aaPredicted RBP19.18■□□□□ 0.66
SMPD3-212ENST00000574662 RAB3GAP1Q15042 981 aa19.17■□□□□ 0.66
SMPD3-212ENST00000574662 TAOK3Q9H2K8 898 aa19.17■□□□□ 0.66
SMPD3-212ENST00000574662 RASSF7Q02833 373 aa19.16■□□□□ 0.66
SMPD3-212ENST00000574662 KBTBD3Q8NAB2 608 aa19.16■□□□□ 0.66
SMPD3-212ENST00000574662 FER1L6Q2WGJ9 1857 aa19.16■□□□□ 0.66
SMPD3-212ENST00000574662 ARFGEF1Q9Y6D6 1849 aa19.16■□□□□ 0.66
SMPD3-212ENST00000574662 G3V3G9 751 aa19.16■□□□□ 0.66
SMPD3-212ENST00000574662 HSP90AA1P07900 732 aaKnown RBP19.16■□□□□ 0.66
SMPD3-212ENST00000574662 SKOR2Q2VWA4 1001 aaPredicted RBP19.16■□□□□ 0.66
SMPD3-212ENST00000574662 SLFNL1Q499Z3 407 aa19.16■□□□□ 0.66
SMPD3-212ENST00000574662 DCAF8Q5TAQ9 597 aa19.16■□□□□ 0.66
SMPD3-212ENST00000574662 ARHGAP27Q6ZUM4 889 aa19.16■□□□□ 0.66
SMPD3-212ENST00000574662 FSD1Q9BTV5 496 aa19.16■□□□□ 0.66
SMPD3-212ENST00000574662 ECE2O60344 883 aa19.15■□□□□ 0.66
SMPD3-212ENST00000574662 CHMLP26374 656 aa19.15■□□□□ 0.66
SMPD3-212ENST00000574662 IARSP41252 1262 aaKnown RBP19.15■□□□□ 0.66
SMPD3-212ENST00000574662 LARGE2Q8N3Y3 721 aa19.15■□□□□ 0.66
SMPD3-212ENST00000574662 CHD4Q14839 1912 aa19.15■□□□□ 0.66
SMPD3-212ENST00000574662 COL4A5P29400 1685 aa19.15■□□□□ 0.66
SMPD3-212ENST00000574662 PDS5AQ29RF7 1337 aaKnown RBP19.15■□□□□ 0.66
SMPD3-212ENST00000574662 MRE11P49959 708 aa19.14■□□□□ 0.66
SMPD3-212ENST00000574662 GTF2IP78347 998 aa19.14■□□□□ 0.66
SMPD3-212ENST00000574662 RABEP1Q15276 862 aa19.14■□□□□ 0.66
SMPD3-212ENST00000574662 CASC1Q6TDU7 716 aa19.14■□□□□ 0.66
SMPD3-212ENST00000574662 PODNQ7Z5L7 613 aa19.14■□□□□ 0.66
SMPD3-212ENST00000574662 TNPO1Q92973 898 aaKnown RBP19.14■□□□□ 0.66
SMPD3-212ENST00000574662 VPS33BQ9H267 617 aa19.14■□□□□ 0.66
SMPD3-212ENST00000574662 LTBP3Q9NS15 1303 aa19.14■□□□□ 0.65
SMPD3-212ENST00000574662 YDJCA8MPS7 323 aa19.14■□□□□ 0.65
SMPD3-212ENST00000574662 TTF1Q15361 905 aaPredicted RBP19.14■□□□□ 0.65
SMPD3-212ENST00000574662 GRIK5Q16478 980 aa19.14■□□□□ 0.65
SMPD3-212ENST00000574662 ABCF2Q9UG63 623 aa19.14■□□□□ 0.65
SMPD3-212ENST00000574662 FAM205AQ6ZU69 1335 aa19.13■□□□□ 0.65
SMPD3-212ENST00000574662 IDH1O75874 414 aaKnown RBP19.12■□□□□ 0.65
SMPD3-212ENST00000574662 TTLL5Q6EMB2 1281 aa19.12■□□□□ 0.65
SMPD3-212ENST00000574662 WDR66Q8TBY9 1149 aa19.12■□□□□ 0.65
SMPD3-212ENST00000574662 MXD3Q9BW11 206 aa19.12■□□□□ 0.65
SMPD3-212ENST00000574662 LRP2BPQ9P2M1 347 aa19.11■□□□□ 0.65
SMPD3-212ENST00000574662 XRCC6P12956 609 aaKnown RBP eCLIP19.11■□□□□ 0.65
SMPD3-212ENST00000574662 ZNF384Q8TF68 577 aa19.11■□□□□ 0.65
SMPD3-212ENST00000574662 FBXW7Q969H0 707 aa19.11■□□□□ 0.65
SMPD3-212ENST00000574662 FAM227BQ96M60 508 aa19.11■□□□□ 0.65
SMPD3-212ENST00000574662 IL25Q9H293 177 aa19.11■□□□□ 0.65
SMPD3-212ENST00000574662 UTRNP46939 3433 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms