RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 ZCCHC2Q9C0B9 1178 aaKnown RBP10.98□□□□□ -0.65
CDH11-216ENST00000569128 NUCKS1Q9H1E3 243 aaKnown RBP10.98□□□□□ -0.65
CDH11-216ENST00000569128 FAM13BQ9NYF5 915 aa10.98□□□□□ -0.65
CDH11-216ENST00000569128 TBX22Q9Y458 520 aa10.98□□□□□ -0.65
CDH11-216ENST00000569128 USP47Q96K76 1375 aa10.98□□□□□ -0.65
CDH11-216ENST00000569128 ST20-MTHFSA0A0A6YYL1 179 aa10.97□□□□□ -0.65
CDH11-216ENST00000569128 TCF3P15923 654 aa10.97□□□□□ -0.65
CDH11-216ENST00000569128 CMTR1Q8N1G2 835 aaKnown RBP10.97□□□□□ -0.65
CDH11-216ENST00000569128 PIK3R5Q8WYR1 880 aa10.97□□□□□ -0.65
CDH11-216ENST00000569128 RTCBQ9Y3I0 505 aaKnown RBP10.97□□□□□ -0.65
CDH11-216ENST00000569128 PTPRUQ92729 1446 aa10.97□□□□□ -0.65
CDH11-216ENST00000569128 STRCQ7RTU9 1775 aa10.97□□□□□ -0.65
CDH11-216ENST00000569128 POLR1AO95602 1720 aaPredicted RBP10.96□□□□□ -0.65
CDH11-216ENST00000569128 YTHDC2Q9H6S0 1430 aaKnown RBP10.96□□□□□ -0.65
CDH11-216ENST00000569128 H7C1W4 665 aa10.96□□□□□ -0.65
CDH11-216ENST00000569128 PCSK2P16519 638 aa10.96□□□□□ -0.65
CDH11-216ENST00000569128 ITGA6P23229 1130 aa10.96□□□□□ -0.65
CDH11-216ENST00000569128 LBRQ14739 615 aaKnown RBP10.96□□□□□ -0.65
CDH11-216ENST00000569128 SAMD5Q5TGI4 173 aa10.96□□□□□ -0.65
CDH11-216ENST00000569128 NPAS4Q8IUM7 802 aa10.96□□□□□ -0.65
CDH11-216ENST00000569128 TRIM22Q8IYM9 498 aa10.96□□□□□ -0.65
CDH11-216ENST00000569128 GJD3Q8N144 294 aa10.96□□□□□ -0.65
CDH11-216ENST00000569128 GIPC2Q8TF65 315 aa10.96□□□□□ -0.65
CDH11-216ENST00000569128 GGNBP2Q9H3C7 697 aa10.96□□□□□ -0.65
CDH11-216ENST00000569128 BRD7Q9NPI1 651 aa10.96□□□□□ -0.65
CDH11-216ENST00000569128 LAMC1P11047 1609 aa10.95□□□□□ -0.66
CDH11-216ENST00000569128 ATXN7O15265 892 aaPredicted RBP10.95□□□□□ -0.66
CDH11-216ENST00000569128 USP5P45974 858 aa10.95□□□□□ -0.66
CDH11-216ENST00000569128 C8orf34Q49A92 452 aa10.95□□□□□ -0.66
CDH11-216ENST00000569128 FIGNL1Q6PIW4 674 aa10.95□□□□□ -0.66
CDH11-216ENST00000569128 WAPLQ7Z5K2 1190 aa10.95□□□□□ -0.66
CDH11-216ENST00000569128 FAM129BQ96TA1 746 aa10.95□□□□□ -0.66
CDH11-216ENST00000569128 LRPPRCP42704 1394 aaKnown RBP10.94□□□□□ -0.66
CDH11-216ENST00000569128 DCDC2BA2VCK2 349 aa10.94□□□□□ -0.66
CDH11-216ENST00000569128 A6NHS1 94 aa10.94□□□□□ -0.66
CDH11-216ENST00000569128 CDK11BP21127 795 aaKnown RBP10.94□□□□□ -0.66
CDH11-216ENST00000569128 GRNP28799 593 aaKnown RBP10.94□□□□□ -0.66
CDH11-216ENST00000569128 PDE3BQ13370 1112 aa10.94□□□□□ -0.66
CDH11-216ENST00000569128 SAFB2Q14151 953 aaKnown RBP eCLIP10.94□□□□□ -0.66
CDH11-216ENST00000569128 ZNF837Q96EG3 531 aaPredicted RBP10.94□□□□□ -0.66
CDH11-216ENST00000569128 PCDHGC4Q9Y5F7 938 aa10.94□□□□□ -0.66
CDH11-216ENST00000569128 PLEKHH1Q9ULM0 1364 aa10.93□□□□□ -0.66
CDH11-216ENST00000569128 KHNYNO15037 678 aaKnown RBP10.93□□□□□ -0.66
CDH11-216ENST00000569128 GPR182O15218 404 aa10.93□□□□□ -0.66
CDH11-216ENST00000569128 EPB42P16452 691 aa10.93□□□□□ -0.66
CDH11-216ENST00000569128 UBAP2LQ14157 1087 aaKnown RBP10.93□□□□□ -0.66
CDH11-216ENST00000569128 TTC16Q8NEE8 873 aa10.93□□□□□ -0.66
CDH11-216ENST00000569128 DMRTB1Q96MA1 342 aa10.93□□□□□ -0.66
CDH11-216ENST00000569128 ABCC11Q96J66 1382 aa10.92□□□□□ -0.66
CDH11-216ENST00000569128 TREHO43280 583 aa10.92□□□□□ -0.66
CDH11-216ENST00000569128 PPFIA3O75145 1194 aa10.92□□□□□ -0.66
CDH11-216ENST00000569128 IGHA2P01877 340 aa10.92□□□□□ -0.66
CDH11-216ENST00000569128 FAM157BP0CG42 384 aa10.92□□□□□ -0.66
CDH11-216ENST00000569128 KCNA6P17658 529 aa10.92□□□□□ -0.66
CDH11-216ENST00000569128 VAMP1P23763 118 aa10.92□□□□□ -0.66
CDH11-216ENST00000569128 TRIP4Q15650 581 aaPredicted RBP10.92□□□□□ -0.66
CDH11-216ENST00000569128 GTPBP3Q969Y2 492 aaKnown RBP10.92□□□□□ -0.66
CDH11-216ENST00000569128 C8orf37Q96NL8 207 aa10.92□□□□□ -0.66
CDH11-216ENST00000569128 PRAM1Q96QH2 718 aa10.92□□□□□ -0.66
CDH11-216ENST00000569128 TESK2Q96S53 571 aa10.92□□□□□ -0.66
CDH11-216ENST00000569128 KCNMB2Q9Y691 235 aa10.92□□□□□ -0.66
CDH11-216ENST00000569128 ROBO2Q9HCK4 1378 aa10.91□□□□□ -0.66
CDH11-216ENST00000569128 DIP2AQ14689 1571 aa10.91□□□□□ -0.66
CDH11-216ENST00000569128 BNIP3LO60238 219 aa10.91□□□□□ -0.66
CDH11-216ENST00000569128 RPLP1P05386 114 aaKnown RBP10.91□□□□□ -0.66
CDH11-216ENST00000569128 SFSWAPQ12872 951 aaKnown RBP10.91□□□□□ -0.66
CDH11-216ENST00000569128 NIF3L1Q9GZT8 377 aa10.91□□□□□ -0.66
CDH11-216ENST00000569128 CENPJQ9HC77 1338 aaPredicted RBP10.9□□□□□ -0.66
CDH11-216ENST00000569128 ARHGEF28Q8N1W1 1705 aaKnown RBP10.9□□□□□ -0.66
CDH11-216ENST00000569128 UBAP1LF5GYI3 381 aa10.9□□□□□ -0.66
CDH11-216ENST00000569128 EFSO43281 561 aa10.9□□□□□ -0.66
CDH11-216ENST00000569128 MAPTP10636 758 aaKnown RBP10.9□□□□□ -0.66
CDH11-216ENST00000569128 TNP2Q05952 138 aa10.9□□□□□ -0.66
CDH11-216ENST00000569128 ABHD17AQ96GS6 310 aa10.9□□□□□ -0.66
CDH11-216ENST00000569128 POGKQ9P215 609 aa10.9□□□□□ -0.66
CDH11-216ENST00000569128 KCNH4Q9UQ05 1017 aa10.9□□□□□ -0.66
CDH11-216ENST00000569128 FNDC3AQ9Y2H6 1198 aaKnown RBP10.9□□□□□ -0.66
CDH11-216ENST00000569128 CHD2O14647 1828 aaKnown RBP10.89□□□□□ -0.67
CDH11-216ENST00000569128 CDC14CA4D256 554 aa10.89□□□□□ -0.67
CDH11-216ENST00000569128 P4HBP07237 508 aaKnown RBP10.89□□□□□ -0.67
CDH11-216ENST00000569128 PLCB3Q01970 1234 aa10.89□□□□□ -0.67
CDH11-216ENST00000569128 DSC3Q14574 896 aa10.89□□□□□ -0.67
CDH11-216ENST00000569128 VWA5B2Q8N398 1253 aa10.89□□□□□ -0.67
CDH11-216ENST00000569128 GMCL1Q96IK5 515 aa10.89□□□□□ -0.67
CDH11-216ENST00000569128 STRN4Q9NRL3 753 aa10.89□□□□□ -0.67
CDH11-216ENST00000569128 NDFIP2Q9NV92 336 aa10.89□□□□□ -0.67
CDH11-216ENST00000569128 TECPR2O15040 1411 aa10.88□□□□□ -0.67
CDH11-216ENST00000569128 XYLBO75191 536 aa10.88□□□□□ -0.67
CDH11-216ENST00000569128 EHHADHQ08426 723 aa10.88□□□□□ -0.67
CDH11-216ENST00000569128 FAM177A1Q8N128 213 aaPredicted RBP10.88□□□□□ -0.67
CDH11-216ENST00000569128 POLR3GLQ9BT43 218 aa10.88□□□□□ -0.67
CDH11-216ENST00000569128 HCN2Q9UL51 889 aa10.88□□□□□ -0.67
CDH11-216ENST00000569128 DLC1Q96QB1 1528 aa10.88□□□□□ -0.67
CDH11-216ENST00000569128 EIF3AQ14152 1382 aaKnown RBP10.88□□□□□ -0.67
CDH11-216ENST00000569128 PIK3R4Q99570 1358 aa10.88□□□□□ -0.67
CDH11-216ENST00000569128 DISP3Q9P2K9 1392 aa10.88□□□□□ -0.67
CDH11-216ENST00000569128 WASHC2AQ641Q2 1341 aa10.87□□□□□ -0.67
CDH11-216ENST00000569128 ZNF335Q9H4Z2 1342 aaPredicted RBP10.87□□□□□ -0.67
CDH11-216ENST00000569128 XRN1Q8IZH2 1706 aaKnown RBP10.87□□□□□ -0.67
CDH11-216ENST00000569128 GPR25O00155 361 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms