RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 TTC39AQ5SRH9 613 aa10.25□□□□□ -0.77
TCF4-241ENST00000568740 DCAF8Q5TAQ9 597 aa10.25□□□□□ -0.77
TCF4-241ENST00000568740 MPHOSPH8Q99549 860 aa10.25□□□□□ -0.77
TCF4-241ENST00000568740 PAG1Q9NWQ8 432 aa10.25□□□□□ -0.77
TCF4-241ENST00000568740 KCNG1Q9UIX4 513 aa10.25□□□□□ -0.77
TCF4-241ENST00000568740 NUP188Q5SRE5 1749 aa10.25□□□□□ -0.77
TCF4-241ENST00000568740 PPFIA3O75145 1194 aa10.25□□□□□ -0.77
TCF4-241ENST00000568740 PHKA1P46020 1223 aa10.25□□□□□ -0.77
TCF4-241ENST00000568740 RTCBQ9Y3I0 505 aaKnown RBP10.25□□□□□ -0.77
TCF4-241ENST00000568740 RBM8AQ9Y5S9 174 aaKnown RBP10.25□□□□□ -0.77
TCF4-241ENST00000568740 TJP1Q07157 1748 aa10.25□□□□□ -0.77
TCF4-241ENST00000568740 CASTP20810 708 aaKnown RBP10.24□□□□□ -0.77
TCF4-241ENST00000568740 HSPA4P34932 840 aa10.24□□□□□ -0.77
TCF4-241ENST00000568740 SNX21Q969T3 373 aa10.24□□□□□ -0.77
TCF4-241ENST00000568740 HAUS7Q99871 368 aa10.24□□□□□ -0.77
TCF4-241ENST00000568740 JAG2Q9Y219 1238 aa10.24□□□□□ -0.77
TCF4-241ENST00000568740 PPFIA4O75335 1185 aa10.24□□□□□ -0.77
TCF4-241ENST00000568740 RFC4P35249 363 aa10.24□□□□□ -0.77
TCF4-241ENST00000568740 KRT27Q7Z3Y8 459 aa10.24□□□□□ -0.77
TCF4-241ENST00000568740 MORC4Q8TE76 937 aa10.24□□□□□ -0.77
TCF4-241ENST00000568740 JAKMIP1Q96N16 626 aaKnown RBP10.24□□□□□ -0.77
TCF4-241ENST00000568740 SGIP1Q9BQI5 828 aa10.24□□□□□ -0.77
TCF4-241ENST00000568740 GDPD2Q9HCC8 539 aa10.24□□□□□ -0.77
TCF4-241ENST00000568740 RAD50Q92878 1312 aa10.24□□□□□ -0.77
TCF4-241ENST00000568740 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.23□□□□□ -0.77
TCF4-241ENST00000568740 ST18O60284 1047 aa10.23□□□□□ -0.77
TCF4-241ENST00000568740 SSFA2P28290 1259 aa10.23□□□□□ -0.77
TCF4-241ENST00000568740 MCAMP43121 646 aa10.23□□□□□ -0.77
TCF4-241ENST00000568740 BCAMP50895 628 aa10.23□□□□□ -0.77
TCF4-241ENST00000568740 WASHC4Q2M389 1173 aa10.23□□□□□ -0.77
TCF4-241ENST00000568740 CCDC158Q5M9N0 1113 aa10.23□□□□□ -0.77
TCF4-241ENST00000568740 NBPF5PQ86XG9 351 aaPredicted RBP10.23□□□□□ -0.77
TCF4-241ENST00000568740 CELF1Q92879 486 aaKnown RBP10.23□□□□□ -0.77
TCF4-241ENST00000568740 TMX3Q96JJ7 454 aa10.23□□□□□ -0.77
TCF4-241ENST00000568740 SETDB2Q96T68 719 aa10.23□□□□□ -0.77
TCF4-241ENST00000568740 PLA2G12BQ9BX93 195 aa10.23□□□□□ -0.77
TCF4-241ENST00000568740 LRRC2Q9BYS8 371 aa10.23□□□□□ -0.77
TCF4-241ENST00000568740 PPP1R37O75864 691 aa10.23□□□□□ -0.77
TCF4-241ENST00000568740 TTLL5Q6EMB2 1281 aa10.23□□□□□ -0.77
TCF4-241ENST00000568740 VRTNQ9H8Y1 702 aa10.23□□□□□ -0.77
TCF4-241ENST00000568740 CCDC171Q6TFL3 1326 aa10.23□□□□□ -0.77
TCF4-241ENST00000568740 CDHR2Q9BYE9 1310 aa10.23□□□□□ -0.77
TCF4-241ENST00000568740 NWD2Q9ULI1 1742 aa10.22□□□□□ -0.77
TCF4-241ENST00000568740 RPS6KA4O75676 772 aa10.22□□□□□ -0.77
TCF4-241ENST00000568740 IDH1O75874 414 aaKnown RBP10.22□□□□□ -0.77
TCF4-241ENST00000568740 PDE8BO95263 885 aa10.22□□□□□ -0.77
TCF4-241ENST00000568740 CHRM1P11229 460 aaPredicted RBP10.22□□□□□ -0.77
TCF4-241ENST00000568740 CHST3Q7LGC8 479 aa10.22□□□□□ -0.77
TCF4-241ENST00000568740 STK11IPQ8N1F8 1099 aa10.22□□□□□ -0.77
TCF4-241ENST00000568740 PROCA1Q8NCQ7 364 aaPredicted RBP10.22□□□□□ -0.77
TCF4-241ENST00000568740 RUFY2Q8WXA3 655 aa10.22□□□□□ -0.77
TCF4-241ENST00000568740 SECISBP2LQ93073 1101 aaKnown RBP10.22□□□□□ -0.77
TCF4-241ENST00000568740 ZNF609O15014 1411 aa10.22□□□□□ -0.77
TCF4-241ENST00000568740 NUP98P52948 1817 aa10.22□□□□□ -0.77
TCF4-241ENST00000568740 WNK3Q9BYP7 1800 aa10.22□□□□□ -0.77
TCF4-241ENST00000568740 CIAO1O76071 339 aa10.22□□□□□ -0.77
TCF4-241ENST00000568740 LARGE1O95461 756 aa10.22□□□□□ -0.77
TCF4-241ENST00000568740 FOXD4Q12950 439 aaPredicted RBP10.22□□□□□ -0.77
TCF4-241ENST00000568740 TRAPPC3LQ5T215 181 aa10.22□□□□□ -0.77
TCF4-241ENST00000568740 CREB3L3Q68CJ9 461 aa10.22□□□□□ -0.77
TCF4-241ENST00000568740 COL4A1P02462 1669 aa10.22□□□□□ -0.77
TCF4-241ENST00000568740 ABCC12Q96J65 1359 aa10.21□□□□□ -0.77
TCF4-241ENST00000568740 KLRK1P26718 216 aa10.21□□□□□ -0.77
TCF4-241ENST00000568740 GYG1P46976 350 aa10.21□□□□□ -0.77
TCF4-241ENST00000568740 HAND2P61296 217 aa10.21□□□□□ -0.77
TCF4-241ENST00000568740 CCDC102BQ68D86 513 aa10.21□□□□□ -0.77
TCF4-241ENST00000568740 VGLL2Q8N8G2 317 aa10.21□□□□□ -0.77
TCF4-241ENST00000568740 KBTBD3Q8NAB2 608 aa10.21□□□□□ -0.77
TCF4-241ENST00000568740 OSBP2Q969R2 916 aa10.21□□□□□ -0.77
TCF4-241ENST00000568740 ZNF652Q9Y2D9 606 aa10.21□□□□□ -0.77
TCF4-241ENST00000568740 M0R2C6 588 aa10.21□□□□□ -0.78
TCF4-241ENST00000568740 NUBP1P53384 320 aa10.21□□□□□ -0.78
TCF4-241ENST00000568740 AK2P54819 239 aa10.21□□□□□ -0.78
TCF4-241ENST00000568740 CHRNDQ07001 517 aa10.21□□□□□ -0.78
TCF4-241ENST00000568740 NECTIN1Q15223 517 aa10.21□□□□□ -0.78
TCF4-241ENST00000568740 CCDC152Q4G0S7 254 aa10.21□□□□□ -0.78
TCF4-241ENST00000568740 NECAB1Q8N987 351 aa10.21□□□□□ -0.78
TCF4-241ENST00000568740 OXER1Q8TDS5 423 aa10.21□□□□□ -0.78
TCF4-241ENST00000568740 TNPO1Q92973 898 aaKnown RBP10.21□□□□□ -0.78
TCF4-241ENST00000568740 GPR101Q96P66 508 aaPredicted RBP10.21□□□□□ -0.78
TCF4-241ENST00000568740 PUS7LQ9H0K6 701 aaKnown RBP10.21□□□□□ -0.78
TCF4-241ENST00000568740 CHMP5Q9NZZ3 219 aa10.21□□□□□ -0.78
TCF4-241ENST00000568740 TAF1P21675 1872 aa10.21□□□□□ -0.78
TCF4-241ENST00000568740 SLC27A2O14975 620 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 CYP2E1P05181 493 aaPredicted RBP10.2□□□□□ -0.78
TCF4-241ENST00000568740 STK3Q13188 491 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 FAM43AQ8N2R8 423 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 MAP4K1Q92918 833 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 PIH1D3Q9NQM4 214 aaKnown RBP10.2□□□□□ -0.78
TCF4-241ENST00000568740 NARFQ9UHQ1 456 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 AKAP2Q9Y2D5 859 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 RIC1Q4ADV7 1423 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 SPDYE2BA6NHP3 402 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 SPDYE5A6NIY4 337 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 SPDYE6P0CI01 402 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 PAX3P23760 479 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 IGHMBP2P38935 993 aaKnown RBP10.2□□□□□ -0.78
TCF4-241ENST00000568740 NFIXQ14938 502 aa10.2□□□□□ -0.78
TCF4-241ENST00000568740 SF3A1Q15459 793 aaKnown RBP10.2□□□□□ -0.78
TCF4-241ENST00000568740 SPDYE2Q495Y8 402 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms