RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 COL4A1P02462 1669 aa20.24■□□□□ 0.83
RAB40C-210ENST00000566290 ANKRD18BA2A2Z9 1011 aa20.24■□□□□ 0.83
RAB40C-210ENST00000566290 EPHX2P34913 555 aa20.24■□□□□ 0.83
RAB40C-210ENST00000566290 RBM17Q96I25 401 aaKnown RBP20.24■□□□□ 0.83
RAB40C-210ENST00000566290 CRAMP1Q96RY5 1269 aa20.24■□□□□ 0.83
RAB40C-210ENST00000566290 HACL1Q9UJ83 578 aa20.24■□□□□ 0.83
RAB40C-210ENST00000566290 ADAMTSL1Q8N6G6 1762 aa20.23■□□□□ 0.83
RAB40C-210ENST00000566290 TNRC18O15417 2968 aaPredicted RBP20.23■□□□□ 0.83
RAB40C-210ENST00000566290 CCDC93Q567U6 631 aa20.23■□□□□ 0.83
RAB40C-210ENST00000566290 DBNDD2Q9BQY9 259 aa20.23■□□□□ 0.83
RAB40C-210ENST00000566290 BCL11AQ9H165 835 aa20.23■□□□□ 0.83
RAB40C-210ENST00000566290 CHMP5Q9NZZ3 219 aa20.23■□□□□ 0.83
RAB40C-210ENST00000566290 RIPOR2Q9Y4F9 1068 aa20.23■□□□□ 0.83
RAB40C-210ENST00000566290 TAF1P21675 1872 aa20.22■□□□□ 0.83
RAB40C-210ENST00000566290 KIAA1211Q6ZU35 1233 aa20.22■□□□□ 0.83
RAB40C-210ENST00000566290 MCOLN1Q9GZU1 580 aa20.22■□□□□ 0.83
RAB40C-210ENST00000566290 ITGA6P23229 1130 aa20.21■□□□□ 0.83
RAB40C-210ENST00000566290 FMR1Q06787 632 aaKnown RBP eCLIP20.21■□□□□ 0.83
RAB40C-210ENST00000566290 LRRC24Q50LG9 513 aa20.21■□□□□ 0.83
RAB40C-210ENST00000566290 SOGA3Q5TF21 947 aa20.21■□□□□ 0.83
RAB40C-210ENST00000566290 CAPNS2Q96L46 248 aa20.21■□□□□ 0.83
RAB40C-210ENST00000566290 BEGAINQ9BUH8 593 aa20.21■□□□□ 0.83
RAB40C-210ENST00000566290 IL25Q9H293 177 aa20.21■□□□□ 0.83
RAB40C-210ENST00000566290 A0A1B0GUL7 405 aa20.2■□□□□ 0.82
RAB40C-210ENST00000566290 PPEF1O14829 653 aaPredicted RBP20.2■□□□□ 0.82
RAB40C-210ENST00000566290 GRM1Q13255 1194 aa20.2■□□□□ 0.82
RAB40C-210ENST00000566290 CYP4F22Q6NT55 531 aa20.2■□□□□ 0.82
RAB40C-210ENST00000566290 VGLL2Q8N8G2 317 aa20.2■□□□□ 0.82
RAB40C-210ENST00000566290 KBTBD3Q8NAB2 608 aa20.2■□□□□ 0.82
RAB40C-210ENST00000566290 GPR101Q96P66 508 aaPredicted RBP20.2■□□□□ 0.82
RAB40C-210ENST00000566290 TM6SF1Q9BZW5 370 aa20.2■□□□□ 0.82
RAB40C-210ENST00000566290 ZNF277Q9NRM2 450 aaPredicted RBP20.2■□□□□ 0.82
RAB40C-210ENST00000566290 CCDC171Q6TFL3 1326 aa20.2■□□□□ 0.82
RAB40C-210ENST00000566290 MROH5Q6ZUA9 1318 aa20.2■□□□□ 0.82
RAB40C-210ENST00000566290 FKBP4Q02790 459 aaKnown RBP eCLIP20.19■□□□□ 0.82
RAB40C-210ENST00000566290 LRRFIP1Q32MZ4 808 aaKnown RBP20.19■□□□□ 0.82
RAB40C-210ENST00000566290 TAF7LQ5H9L4 462 aa20.19■□□□□ 0.82
RAB40C-210ENST00000566290 PAXIP1Q6ZW49 1069 aaPredicted RBP20.19■□□□□ 0.82
RAB40C-210ENST00000566290 FSD1Q9BTV5 496 aa20.19■□□□□ 0.82
RAB40C-210ENST00000566290 BOLA2Q9H3K6 86 aa20.19■□□□□ 0.82
RAB40C-210ENST00000566290 GREM2Q9H772 168 aa20.19■□□□□ 0.82
RAB40C-210ENST00000566290 A0A1B0GUL6 1792 aa20.18■□□□□ 0.82
RAB40C-210ENST00000566290 MAP4K4O95819 1239 aaPredicted RBP20.18■□□□□ 0.82
RAB40C-210ENST00000566290 SF3B3Q15393 1217 aaKnown RBP20.18■□□□□ 0.82
RAB40C-210ENST00000566290 CCDC152Q4G0S7 254 aa20.18■□□□□ 0.82
RAB40C-210ENST00000566290 CWC27Q6UX04 472 aaKnown RBP20.18■□□□□ 0.82
RAB40C-210ENST00000566290 PNMA8AQ86V59 439 aaPredicted RBP20.18■□□□□ 0.82
RAB40C-210ENST00000566290 ZNF594Q96JF6 807 aaPredicted RBP20.18■□□□□ 0.82
RAB40C-210ENST00000566290 CASP8AP2Q9UKL3 1982 aa20.17■□□□□ 0.82
RAB40C-210ENST00000566290 ZBTB22O15209 634 aa20.17■□□□□ 0.82
RAB40C-210ENST00000566290 CD2BP2O95400 341 aaKnown RBP20.17■□□□□ 0.82
RAB40C-210ENST00000566290 LDHAL6AQ6ZMR3 332 aa20.17■□□□□ 0.82
RAB40C-210ENST00000566290 DDX46Q7L014 1031 aaKnown RBP20.17■□□□□ 0.82
RAB40C-210ENST00000566290 RTKN2Q8IZC4 609 aa20.17■□□□□ 0.82
RAB40C-210ENST00000566290 CELF1Q92879 486 aaKnown RBP20.17■□□□□ 0.82
RAB40C-210ENST00000566290 MAP4K1Q92918 833 aa20.17■□□□□ 0.82
RAB40C-210ENST00000566290 PUS3Q9BZE2 481 aaKnown RBP20.17■□□□□ 0.82
RAB40C-210ENST00000566290 THSD7BQ9C0I4 1608 aa20.16■□□□□ 0.82
RAB40C-210ENST00000566290 COL4A5P29400 1685 aa20.16■□□□□ 0.82
RAB40C-210ENST00000566290 AOC2O75106 756 aa20.16■□□□□ 0.82
RAB40C-210ENST00000566290 NMIQ13287 307 aaPredicted RBP20.16■□□□□ 0.82
RAB40C-210ENST00000566290 GRAPQ13588 217 aa20.16■□□□□ 0.82
RAB40C-210ENST00000566290 TSGA10IPQ3SY00 556 aa20.16■□□□□ 0.82
RAB40C-210ENST00000566290 CCDC158Q5M9N0 1113 aa20.16■□□□□ 0.82
RAB40C-210ENST00000566290 GRAPLQ8TC17 118 aaPredicted RBP20.16■□□□□ 0.82
RAB40C-210ENST00000566290 HMG20BQ9P0W2 317 aa20.16■□□□□ 0.82
RAB40C-210ENST00000566290 ATP6V0A2Q9Y487 856 aa20.16■□□□□ 0.82
RAB40C-210ENST00000566290 PDE8BO95263 885 aa20.15■□□□□ 0.82
RAB40C-210ENST00000566290 ECE1P42892 770 aa20.15■□□□□ 0.82
RAB40C-210ENST00000566290 NECTIN1Q15223 517 aa20.15■□□□□ 0.82
RAB40C-210ENST00000566290 ATP2B3Q16720 1220 aa20.15■□□□□ 0.82
RAB40C-210ENST00000566290 CCDC85AQ96PX6 553 aaPredicted RBP20.15■□□□□ 0.82
RAB40C-210ENST00000566290 CWC22Q9HCG8 908 aaKnown RBP20.15■□□□□ 0.82
RAB40C-210ENST00000566290 SEC31BQ9NQW1 1179 aa20.15■□□□□ 0.82
RAB40C-210ENST00000566290 HELLSQ9NRZ9 838 aa20.15■□□□□ 0.82
RAB40C-210ENST00000566290 PAG1Q9NWQ8 432 aa20.15■□□□□ 0.82
RAB40C-210ENST00000566290 PALD1Q9ULE6 856 aa20.15■□□□□ 0.82
RAB40C-210ENST00000566290 BBOX1O75936 387 aa20.14■□□□□ 0.81
RAB40C-210ENST00000566290 ZFYP08048 801 aaPredicted RBP20.14■□□□□ 0.81
RAB40C-210ENST00000566290 FGFR2P21802 821 aa20.14■□□□□ 0.81
RAB40C-210ENST00000566290 NFKBIBQ15653 356 aa20.14■□□□□ 0.81
RAB40C-210ENST00000566290 METTL24Q5JXM2 366 aa20.14■□□□□ 0.81
RAB40C-210ENST00000566290 PSMD1Q99460 953 aa20.14■□□□□ 0.81
RAB40C-210ENST00000566290 AKAP11Q9UKA4 1901 aa20.14■□□□□ 0.81
RAB40C-210ENST00000566290 RPAP1Q9BWH6 1393 aaPredicted RBP20.13■□□□□ 0.81
RAB40C-210ENST00000566290 A0A0D9SFI3 127 aa20.13■□□□□ 0.81
RAB40C-210ENST00000566290 IFIT1P09914 478 aaKnown RBP20.13■□□□□ 0.81
RAB40C-210ENST00000566290 IARSP41252 1262 aaKnown RBP20.13■□□□□ 0.81
RAB40C-210ENST00000566290 CUL4AQ13619 759 aa20.13■□□□□ 0.81
RAB40C-210ENST00000566290 PUM3Q15397 648 aaKnown RBP20.13■□□□□ 0.81
RAB40C-210ENST00000566290 CST9Q5W186 159 aa20.13■□□□□ 0.81
RAB40C-210ENST00000566290 CC2D2BQ6DHV5 1058 aa20.13■□□□□ 0.81
RAB40C-210ENST00000566290 SP8Q8IXZ3 490 aa20.13■□□□□ 0.81
RAB40C-210ENST00000566290 XAGE2Q96GT9 111 aa20.13■□□□□ 0.81
RAB40C-210ENST00000566290 INTS4Q96HW7 963 aaKnown RBP20.13■□□□□ 0.81
RAB40C-210ENST00000566290 NEUROD6Q96NK8 337 aa20.13■□□□□ 0.81
RAB40C-210ENST00000566290 SNX14Q9Y5W7 946 aa20.13■□□□□ 0.81
RAB40C-210ENST00000566290 MYH7P12883 1935 aa20.13■□□□□ 0.81
RAB40C-210ENST00000566290 DOCK2Q92608 1830 aa20.12■□□□□ 0.81
RAB40C-210ENST00000566290 FZD9O00144 591 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms