RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 POU5F1Q01860 360 aaKnown RBP13.02□□□□□ -0.33
UBFD1-205ENST00000566136 SOGA3Q5TF21 947 aa13.02□□□□□ -0.33
UBFD1-205ENST00000566136 STK26Q9P289 416 aa13.02□□□□□ -0.33
UBFD1-205ENST00000566136 GGT7Q9UJ14 662 aa13.02□□□□□ -0.33
UBFD1-205ENST00000566136 SPATA31A6Q5VVP1 1343 aa13.02□□□□□ -0.33
UBFD1-205ENST00000566136 TCERG1O14776 1098 aaKnown RBP13.01□□□□□ -0.33
UBFD1-205ENST00000566136 POU5F1BQ06416 359 aa13.01□□□□□ -0.33
UBFD1-205ENST00000566136 SQSTM1Q13501 440 aa13.01□□□□□ -0.33
UBFD1-205ENST00000566136 MEX3CQ5U5Q3 659 aaKnown RBP13.01□□□□□ -0.33
UBFD1-205ENST00000566136 PRKAB1Q9Y478 270 aa13.01□□□□□ -0.33
UBFD1-205ENST00000566136 NSD3Q9BZ95 1437 aa13.01□□□□□ -0.33
UBFD1-205ENST00000566136 GJA8P48165 433 aa13.01□□□□□ -0.33
UBFD1-205ENST00000566136 EXOSC10Q01780 885 aaKnown RBP13.01□□□□□ -0.33
UBFD1-205ENST00000566136 SMAD5Q99717 465 aaKnown RBP13.01□□□□□ -0.33
UBFD1-205ENST00000566136 RBCK1Q9BYM8 510 aa13.01□□□□□ -0.33
UBFD1-205ENST00000566136 ZIM2Q9NZV7 527 aa13.01□□□□□ -0.33
UBFD1-205ENST00000566136 V9GY48 417 aaPredicted RBP13.01□□□□□ -0.33
UBFD1-205ENST00000566136 C1orf167Q5SNV9 1468 aa13.01□□□□□ -0.33
UBFD1-205ENST00000566136 ATP5J2-PTCD1G3V325 749 aa13□□□□□ -0.33
UBFD1-205ENST00000566136 PHF14O94880 888 aa13□□□□□ -0.33
UBFD1-205ENST00000566136 COL9A1P20849 921 aa13□□□□□ -0.33
UBFD1-205ENST00000566136 ERAP2Q6P179 960 aa13□□□□□ -0.33
UBFD1-205ENST00000566136 KIAA0907Q7Z7F0 614 aaPredicted RBP13□□□□□ -0.33
UBFD1-205ENST00000566136 ZNF654Q8IZM8 581 aa13□□□□□ -0.33
UBFD1-205ENST00000566136 PLPP7Q8NBV4 271 aa13□□□□□ -0.33
UBFD1-205ENST00000566136 MYRIPQ8NFW9 859 aa13□□□□□ -0.33
UBFD1-205ENST00000566136 CDC5LQ99459 802 aaKnown RBP13□□□□□ -0.33
UBFD1-205ENST00000566136 SHPRHQ149N8 1683 aa13□□□□□ -0.33
UBFD1-205ENST00000566136 CCDC93Q567U6 631 aa13□□□□□ -0.33
UBFD1-205ENST00000566136 ORAI2Q96SN7 254 aa13□□□□□ -0.33
UBFD1-205ENST00000566136 JADE2Q9NQC1 790 aa13□□□□□ -0.33
UBFD1-205ENST00000566136 NHSL1Q5SYE7 1610 aa12.99□□□□□ -0.33
UBFD1-205ENST00000566136 APAF1O14727 1248 aa12.99□□□□□ -0.33
UBFD1-205ENST00000566136 CNGA1P29973 690 aa12.99□□□□□ -0.33
UBFD1-205ENST00000566136 SLKQ9H2G2 1235 aaPredicted RBP12.99□□□□□ -0.33
UBFD1-205ENST00000566136 SPG7Q9UQ90 795 aa12.99□□□□□ -0.33
UBFD1-205ENST00000566136 DUSP27Q5VZP5 1158 aa12.99□□□□□ -0.33
UBFD1-205ENST00000566136 WAPLQ7Z5K2 1190 aa12.99□□□□□ -0.33
UBFD1-205ENST00000566136 CRBNQ96SW2 442 aa12.99□□□□□ -0.33
UBFD1-205ENST00000566136 TYW1Q9NV66 732 aaKnown RBP12.99□□□□□ -0.33
UBFD1-205ENST00000566136 ZNF521Q96K83 1311 aa12.98□□□□□ -0.33
UBFD1-205ENST00000566136 C20orf194Q5TEA3 1177 aa12.98□□□□□ -0.33
UBFD1-205ENST00000566136 E2F7Q96AV8 911 aa12.98□□□□□ -0.33
UBFD1-205ENST00000566136 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.98□□□□□ -0.33
UBFD1-205ENST00000566136 ZBBXA8MT70 800 aa12.98□□□□□ -0.33
UBFD1-205ENST00000566136 TIMM44O43615 452 aa12.98□□□□□ -0.33
UBFD1-205ENST00000566136 PIP5K1CO60331 668 aa12.98□□□□□ -0.33
UBFD1-205ENST00000566136 KATNA1O75449 491 aa12.98□□□□□ -0.33
UBFD1-205ENST00000566136 NR1I2O75469 434 aa12.98□□□□□ -0.33
UBFD1-205ENST00000566136 GPSM2P81274 684 aa12.98□□□□□ -0.33
UBFD1-205ENST00000566136 MORC1Q86VD1 984 aa12.98□□□□□ -0.33
UBFD1-205ENST00000566136 SLF2Q8IX21 1173 aa12.98□□□□□ -0.33
UBFD1-205ENST00000566136 CELF2-AS1Q8N7Q2 184 aa12.98□□□□□ -0.33
UBFD1-205ENST00000566136 LRRC59Q96AG4 307 aaKnown RBP12.98□□□□□ -0.33
UBFD1-205ENST00000566136 HINFPQ9BQA5 517 aa12.98□□□□□ -0.33
UBFD1-205ENST00000566136 CFHR5Q9BXR6 569 aa12.98□□□□□ -0.33
UBFD1-205ENST00000566136 RSPH9Q9H1X1 276 aaPredicted RBP12.98□□□□□ -0.33
UBFD1-205ENST00000566136 PNMA6FA0A0J9YX94 578 aa12.97□□□□□ -0.33
UBFD1-205ENST00000566136 SLC4A3P48751 1232 aa12.97□□□□□ -0.33
UBFD1-205ENST00000566136 Q3C1V9 767 aa12.97□□□□□ -0.33
UBFD1-205ENST00000566136 TIFAQ96CG3 184 aa12.97□□□□□ -0.33
UBFD1-205ENST00000566136 TRIM55Q9BYV6 548 aa12.97□□□□□ -0.33
UBFD1-205ENST00000566136 RNASEH2AO75792 299 aaKnown RBP12.97□□□□□ -0.33
UBFD1-205ENST00000566136 MCL1Q07820 350 aa12.97□□□□□ -0.33
UBFD1-205ENST00000566136 MTMR2Q13614 643 aa12.97□□□□□ -0.33
UBFD1-205ENST00000566136 TMEM92Q6UXU6 159 aa12.97□□□□□ -0.33
UBFD1-205ENST00000566136 TSEN2Q8NCE0 465 aaKnown RBP12.97□□□□□ -0.33
UBFD1-205ENST00000566136 PRKD2Q9BZL6 878 aa12.97□□□□□ -0.33
UBFD1-205ENST00000566136 DNAAF2Q9NVR5 837 aaKnown RBP12.97□□□□□ -0.33
UBFD1-205ENST00000566136 IL31Q6EBC2 164 aa12.96□□□□□ -0.33
UBFD1-205ENST00000566136 ARHGEF28Q8N1W1 1705 aaKnown RBP12.96□□□□□ -0.33
UBFD1-205ENST00000566136 SVIPQ8NHG7 77 aa12.96□□□□□ -0.33
UBFD1-205ENST00000566136 FAM198AQ9UFP1 575 aa12.96□□□□□ -0.33
UBFD1-205ENST00000566136 CD2APQ9Y5K6 639 aa12.96□□□□□ -0.33
UBFD1-205ENST00000566136 SSBP05455 408 aaKnown RBP eCLIP12.96□□□□□ -0.34
UBFD1-205ENST00000566136 CT47B1P0C2W7 299 aaPredicted RBP12.96□□□□□ -0.34
UBFD1-205ENST00000566136 RAPGEF1Q13905 1077 aa12.96□□□□□ -0.34
UBFD1-205ENST00000566136 NFATC2IPQ8NCF5 419 aa12.96□□□□□ -0.34
UBFD1-205ENST00000566136 SAP130Q9H0E3 1048 aa12.96□□□□□ -0.34
UBFD1-205ENST00000566136 TULP4Q9NRJ4 1543 aa12.95□□□□□ -0.34
UBFD1-205ENST00000566136 ZBTB7BO15156 539 aaPredicted RBP12.95□□□□□ -0.34
UBFD1-205ENST00000566136 CAND2O75155 1236 aa12.95□□□□□ -0.34
UBFD1-205ENST00000566136 MYL1P05976 194 aa12.95□□□□□ -0.34
UBFD1-205ENST00000566136 NEK3P51956 506 aa12.95□□□□□ -0.34
UBFD1-205ENST00000566136 GRAMD1BQ3KR37 738 aa12.95□□□□□ -0.34
UBFD1-205ENST00000566136 APPBP2Q92624 585 aa12.95□□□□□ -0.34
UBFD1-205ENST00000566136 SLC45A1Q9Y2W3 748 aa12.95□□□□□ -0.34
UBFD1-205ENST00000566136 SH3BP1Q9Y3L3 701 aa12.95□□□□□ -0.34
UBFD1-205ENST00000566136 PCDHB9Q9Y5E1 797 aa12.95□□□□□ -0.34
UBFD1-205ENST00000566136 PNPLA6Q8IY17 1366 aa12.95□□□□□ -0.34
UBFD1-205ENST00000566136 CHPFQ8IZ52 775 aa12.95□□□□□ -0.34
UBFD1-205ENST00000566136 SAMD3Q8N6K7 520 aa12.95□□□□□ -0.34
UBFD1-205ENST00000566136 GPRASP2Q96D09 838 aa12.95□□□□□ -0.34
UBFD1-205ENST00000566136 GJA3Q9Y6H8 435 aa12.95□□□□□ -0.34
UBFD1-205ENST00000566136 EVC2Q86UK5 1308 aa12.94□□□□□ -0.34
UBFD1-205ENST00000566136 SLFN5Q08AF3 891 aa12.94□□□□□ -0.34
UBFD1-205ENST00000566136 ZNF772Q68DY9 489 aaPredicted RBP12.94□□□□□ -0.34
UBFD1-205ENST00000566136 ATCAYQ86WG3 371 aa12.94□□□□□ -0.34
UBFD1-205ENST00000566136 DDX42Q86XP3 938 aaKnown RBP eCLIP12.94□□□□□ -0.34
UBFD1-205ENST00000566136 MYO1HQ8N1T3 1032 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms