RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 KDM3BQ7LBC6 1761 aa14.58□□□□□ -0.08
CAPN3-215ENST00000565559 RANBP2P49792 3224 aaKnown RBP14.58□□□□□ -0.08
CAPN3-215ENST00000565559 A0A1W2PPC1 479 aa14.58□□□□□ -0.08
CAPN3-215ENST00000565559 POTEB2H3BUK9 544 aa14.58□□□□□ -0.08
CAPN3-215ENST00000565559 PPP1R12BO60237 982 aaPredicted RBP14.58□□□□□ -0.08
CAPN3-215ENST00000565559 ANXA1P04083 346 aa14.58□□□□□ -0.08
CAPN3-215ENST00000565559 PLCG2P16885 1265 aa14.58□□□□□ -0.08
CAPN3-215ENST00000565559 MMP14P50281 582 aa14.58□□□□□ -0.08
CAPN3-215ENST00000565559 PROSER3Q2NL68 480 aa14.58□□□□□ -0.08
CAPN3-215ENST00000565559 XAGE3Q8WTP9 111 aa14.58□□□□□ -0.08
CAPN3-215ENST00000565559 NR2E3Q9Y5X4 410 aa14.58□□□□□ -0.08
CAPN3-215ENST00000565559 TAF1P21675 1872 aa14.58□□□□□ -0.08
CAPN3-215ENST00000565559 MYO3BQ8WXR4 1341 aa14.58□□□□□ -0.08
CAPN3-215ENST00000565559 UNCXA6NJT0 531 aa14.57□□□□□ -0.08
CAPN3-215ENST00000565559 ZNF428Q96B54 188 aa14.57□□□□□ -0.08
CAPN3-215ENST00000565559 FAM89AQ96GI7 184 aa14.57□□□□□ -0.08
CAPN3-215ENST00000565559 OCEL1Q9H607 264 aa14.57□□□□□ -0.08
CAPN3-215ENST00000565559 SASH1O94885 1247 aa14.56□□□□□ -0.08
CAPN3-215ENST00000565559 MAP3K11Q16584 847 aa14.56□□□□□ -0.08
CAPN3-215ENST00000565559 FBXW7Q969H0 707 aa14.56□□□□□ -0.08
CAPN3-215ENST00000565559 COL1A1P02452 1464 aaPredicted RBP14.56□□□□□ -0.08
CAPN3-215ENST00000565559 WTIPA6NIX2 430 aaPredicted RBP14.55□□□□□ -0.08
CAPN3-215ENST00000565559 HSP90B1P14625 803 aaKnown RBP14.55□□□□□ -0.08
CAPN3-215ENST00000565559 ANKRD13DQ6ZTN6 518 aa14.55□□□□□ -0.08
CAPN3-215ENST00000565559 NKX2-3Q8TAU0 364 aa14.55□□□□□ -0.08
CAPN3-215ENST00000565559 CLMNQ96JQ2 1002 aa14.55□□□□□ -0.08
CAPN3-215ENST00000565559 PRO3102Q9H379 93 aa14.55□□□□□ -0.08
CAPN3-215ENST00000565559 TSPYL4Q9UJ04 414 aa14.55□□□□□ -0.08
CAPN3-215ENST00000565559 XDHP47989 1333 aa14.55□□□□□ -0.08
CAPN3-215ENST00000565559 IRS4O14654 1257 aaPredicted RBP14.54□□□□□ -0.08
CAPN3-215ENST00000565559 WDHD1O75717 1129 aaPredicted RBP14.54□□□□□ -0.08
CAPN3-215ENST00000565559 ATP2B4P23634 1241 aa14.54□□□□□ -0.08
CAPN3-215ENST00000565559 KIF22Q14807 665 aa14.54□□□□□ -0.08
CAPN3-215ENST00000565559 SH3TC2Q8TF17 1288 aa14.54□□□□□ -0.08
CAPN3-215ENST00000565559 FZD1Q9UP38 647 aa14.54□□□□□ -0.08
CAPN3-215ENST00000565559 COL6A3P12111 3177 aa14.54□□□□□ -0.08
CAPN3-215ENST00000565559 IREB2P48200 963 aaKnown RBP14.53□□□□□ -0.08
CAPN3-215ENST00000565559 SUPT20HL1Q3ZLR7 823 aa14.53□□□□□ -0.08
CAPN3-215ENST00000565559 RTL5Q5HYW3 569 aaPredicted RBP14.53□□□□□ -0.08
CAPN3-215ENST00000565559 DACT2Q5SW24 774 aa14.53□□□□□ -0.08
CAPN3-215ENST00000565559 DEFB129Q9H1M3 183 aa14.53□□□□□ -0.08
CAPN3-215ENST00000565559 ZFYVE28Q9HCC9 887 aa14.53□□□□□ -0.08
CAPN3-215ENST00000565559 PPP2R3BQ9Y5P8 575 aa14.53□□□□□ -0.08
CAPN3-215ENST00000565559 TESPA1A2RU30 521 aaPredicted RBP14.52□□□□□ -0.09
CAPN3-215ENST00000565559 CAP1Q01518 475 aa14.52□□□□□ -0.09
CAPN3-215ENST00000565559 TAF1CQ15572 869 aaPredicted RBP14.52□□□□□ -0.09
CAPN3-215ENST00000565559 STRIP1Q5VSL9 837 aa14.52□□□□□ -0.09
CAPN3-215ENST00000565559 LHX8Q68G74 356 aa14.52□□□□□ -0.09
CAPN3-215ENST00000565559 PDCD7Q8N8D1 485 aaKnown RBP14.52□□□□□ -0.09
CAPN3-215ENST00000565559 PTPN18Q99952 460 aa14.52□□□□□ -0.09
CAPN3-215ENST00000565559 PSME4Q14997 1843 aa14.51□□□□□ -0.09
CAPN3-215ENST00000565559 GNRH1P01148 92 aa14.51□□□□□ -0.09
CAPN3-215ENST00000565559 CCDC152Q4G0S7 254 aa14.51□□□□□ -0.09
CAPN3-215ENST00000565559 PLBD2Q8NHP8 589 aa14.51□□□□□ -0.09
CAPN3-215ENST00000565559 LRCH3Q96II8 777 aa14.51□□□□□ -0.09
CAPN3-215ENST00000565559 MXD3Q9BW11 206 aa14.51□□□□□ -0.09
CAPN3-215ENST00000565559 SEC31BQ9NQW1 1179 aa14.51□□□□□ -0.09
CAPN3-215ENST00000565559 COL4A1P02462 1669 aa14.5□□□□□ -0.09
CAPN3-215ENST00000565559 ATP5J2-PTCD1G3V325 749 aa14.5□□□□□ -0.09
CAPN3-215ENST00000565559 SOX1O00570 391 aaPredicted RBP14.5□□□□□ -0.09
CAPN3-215ENST00000565559 ZBTB7BO15156 539 aaPredicted RBP14.5□□□□□ -0.09
CAPN3-215ENST00000565559 PRMT2P55345 433 aa14.5□□□□□ -0.09
CAPN3-215ENST00000565559 ANKRD13AQ8IZ07 590 aa14.5□□□□□ -0.09
CAPN3-215ENST00000565559 SHISA4Q96DD7 197 aa14.5□□□□□ -0.09
CAPN3-215ENST00000565559 ISCA1Q9BUE6 129 aa14.5□□□□□ -0.09
CAPN3-215ENST00000565559 MFRPQ9BY79 579 aa14.5□□□□□ -0.09
CAPN3-215ENST00000565559 MED23Q9ULK4 1368 aa14.49□□□□□ -0.09
CAPN3-215ENST00000565559 NFE2L2Q16236 605 aa14.49□□□□□ -0.09
CAPN3-215ENST00000565559 GPR153Q6NV75 609 aa14.49□□□□□ -0.09
CAPN3-215ENST00000565559 KIAA0825Q8IV33 1275 aa14.49□□□□□ -0.09
CAPN3-215ENST00000565559 ANKRD18AQ8IVF6 992 aa14.49□□□□□ -0.09
CAPN3-215ENST00000565559 COL25A1Q9BXS0 654 aaPredicted RBP14.49□□□□□ -0.09
CAPN3-215ENST00000565559 STXBP5LQ9Y2K9 1186 aa14.49□□□□□ -0.09
CAPN3-215ENST00000565559 MYO1BO43795 1136 aa14.48□□□□□ -0.09
CAPN3-215ENST00000565559 GJA5P36382 358 aa14.48□□□□□ -0.09
CAPN3-215ENST00000565559 DLGAP5Q15398 846 aa14.48□□□□□ -0.09
CAPN3-215ENST00000565559 DEFB123Q8N688 67 aa14.48□□□□□ -0.09
CAPN3-215ENST00000565559 COA1Q9GZY4 146 aa14.48□□□□□ -0.09
CAPN3-215ENST00000565559 EVI5O60447 810 aa14.47□□□□□ -0.09
CAPN3-215ENST00000565559 GJA8P48165 433 aa14.47□□□□□ -0.09
CAPN3-215ENST00000565559 GTF2A2P52657 109 aa14.47□□□□□ -0.09
CAPN3-215ENST00000565559 ZBTB38Q8NAP3 1195 aaPredicted RBP14.47□□□□□ -0.09
CAPN3-215ENST00000565559 OPTNQ96CV9 577 aa14.47□□□□□ -0.09
CAPN3-215ENST00000565559 ZBED3Q96IU2 234 aaPredicted RBP14.47□□□□□ -0.09
CAPN3-215ENST00000565559 ELP3Q9H9T3 547 aa14.47□□□□□ -0.09
CAPN3-215ENST00000565559 BABAM1Q9NWV8 329 aa14.47□□□□□ -0.09
CAPN3-215ENST00000565559 SSC5DA1L4H1 1573 aa14.47□□□□□ -0.09
CAPN3-215ENST00000565559 MAPK8IP3Q9UPT6 1336 aa14.46□□□□□ -0.09
CAPN3-215ENST00000565559 CCL15-CCL14A0A0B4J2E2 113 aa14.46□□□□□ -0.09
CAPN3-215ENST00000565559 LACTBP83111 547 aaPredicted RBP14.46□□□□□ -0.09
CAPN3-215ENST00000565559 TRIM28Q13263 835 aaKnown RBP14.46□□□□□ -0.09
CAPN3-215ENST00000565559 MTFR1Q15390 333 aa14.46□□□□□ -0.09
CAPN3-215ENST00000565559 CCL15Q16663 113 aa14.46□□□□□ -0.09
CAPN3-215ENST00000565559 TTLL5Q6EMB2 1281 aa14.46□□□□□ -0.09
CAPN3-215ENST00000565559 MS4A4AQ96JQ5 239 aa14.46□□□□□ -0.09
CAPN3-215ENST00000565559 LAMB1P07942 1786 aa14.46□□□□□ -0.09
CAPN3-215ENST00000565559 ZNF804BA4D1E1 1349 aa14.45□□□□□ -0.1
CAPN3-215ENST00000565559 USP2O75604 605 aaPredicted RBP14.45□□□□□ -0.1
CAPN3-215ENST00000565559 FARP2O94887 1054 aaPredicted RBP14.45□□□□□ -0.1
CAPN3-215ENST00000565559 GJB1P08034 283 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms