RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.82□□□□□ -0.36
NEIL1-202ENST00000561643 ZNF274Q96GC6 653 aaPredicted RBP12.82□□□□□ -0.36
NEIL1-202ENST00000561643 USP28Q96RU2 1077 aa12.82□□□□□ -0.36
NEIL1-202ENST00000561643 ISCA1Q9BUE6 129 aa12.82□□□□□ -0.36
NEIL1-202ENST00000561643 CTNNA3Q9UI47 895 aa12.82□□□□□ -0.36
NEIL1-202ENST00000561643 RCOR1Q9UKL0 485 aa12.82□□□□□ -0.36
NEIL1-202ENST00000561643 KCPQ6ZWJ8 1503 aa12.82□□□□□ -0.36
NEIL1-202ENST00000561643 IMMTQ16891 758 aaKnown RBP12.82□□□□□ -0.36
NEIL1-202ENST00000561643 TDRD7Q8NHU6 1098 aaKnown RBP12.82□□□□□ -0.36
NEIL1-202ENST00000561643 FAM89AQ96GI7 184 aa12.82□□□□□ -0.36
NEIL1-202ENST00000561643 ME1P48163 572 aa12.81□□□□□ -0.36
NEIL1-202ENST00000561643 KIF6Q6ZMV9 814 aa12.81□□□□□ -0.36
NEIL1-202ENST00000561643 CCDC186Q7Z3E2 898 aa12.81□□□□□ -0.36
NEIL1-202ENST00000561643 TMOD3Q9NYL9 352 aa12.81□□□□□ -0.36
NEIL1-202ENST00000561643 TJP1Q07157 1748 aa12.81□□□□□ -0.36
NEIL1-202ENST00000561643 STRCP1A6NGW2 1772 aa12.81□□□□□ -0.36
NEIL1-202ENST00000561643 ZNF75DP51815 510 aa12.81□□□□□ -0.36
NEIL1-202ENST00000561643 EVA1CP58658 441 aa12.81□□□□□ -0.36
NEIL1-202ENST00000561643 IFIT5Q13325 482 aaKnown RBP12.81□□□□□ -0.36
NEIL1-202ENST00000561643 HSP90AB3PQ58FF7 597 aa12.81□□□□□ -0.36
NEIL1-202ENST00000561643 NUP188Q5SRE5 1749 aa12.81□□□□□ -0.36
NEIL1-202ENST00000561643 GOLGA6L19H0YKK7 550 aa12.8□□□□□ -0.36
NEIL1-202ENST00000561643 KINO60870 393 aaKnown RBP12.8□□□□□ -0.36
NEIL1-202ENST00000561643 CAVIN2O95810 425 aa12.8□□□□□ -0.36
NEIL1-202ENST00000561643 ZFYP08048 801 aaPredicted RBP12.8□□□□□ -0.36
NEIL1-202ENST00000561643 CARD10Q9BWT7 1032 aa12.8□□□□□ -0.36
NEIL1-202ENST00000561643 GPHNQ9NQX3 736 aaPredicted RBP12.8□□□□□ -0.36
NEIL1-202ENST00000561643 CARMIL3Q8ND23 1372 aa12.8□□□□□ -0.36
NEIL1-202ENST00000561643 SALL1Q9NSC2 1324 aa12.8□□□□□ -0.36
NEIL1-202ENST00000561643 CTAGE5O15320 804 aa12.8□□□□□ -0.36
NEIL1-202ENST00000561643 OGFRQ9NZT2 677 aa12.8□□□□□ -0.36
NEIL1-202ENST00000561643 COL5A2P05997 1499 aaPredicted RBP12.8□□□□□ -0.36
NEIL1-202ENST00000561643 LAMA4Q16363 1823 aa12.8□□□□□ -0.36
NEIL1-202ENST00000561643 BRD2P25440 801 aaKnown RBP12.8□□□□□ -0.36
NEIL1-202ENST00000561643 SCARF1Q14162 830 aa12.8□□□□□ -0.36
NEIL1-202ENST00000561643 ATL3Q6DD88 541 aa12.8□□□□□ -0.36
NEIL1-202ENST00000561643 GOLPH3LQ9H4A5 285 aa12.8□□□□□ -0.36
NEIL1-202ENST00000561643 ZAP70P43403 619 aa12.79□□□□□ -0.36
NEIL1-202ENST00000561643 FSIP1Q8NA03 581 aa12.79□□□□□ -0.36
NEIL1-202ENST00000561643 FEZ1Q99689 392 aa12.79□□□□□ -0.36
NEIL1-202ENST00000561643 FBXO3Q9UK99 471 aa12.79□□□□□ -0.36
NEIL1-202ENST00000561643 FGAP02671 866 aa12.79□□□□□ -0.36
NEIL1-202ENST00000561643 PCCAP05165 728 aaPredicted RBP12.79□□□□□ -0.36
NEIL1-202ENST00000561643 STX1AQ16623 288 aa12.79□□□□□ -0.36
NEIL1-202ENST00000561643 RALYLQ86SE5 291 aaKnown RBP12.79□□□□□ -0.36
NEIL1-202ENST00000561643 PLA2G4DQ86XP0 818 aa12.79□□□□□ -0.36
NEIL1-202ENST00000561643 NRBP1Q9UHY1 535 aa12.79□□□□□ -0.36
NEIL1-202ENST00000561643 PRC1O43663 620 aa12.79□□□□□ -0.36
NEIL1-202ENST00000561643 NCBP1Q09161 790 aaKnown RBP12.79□□□□□ -0.36
NEIL1-202ENST00000561643 NAA30Q147X3 362 aaPredicted RBP12.79□□□□□ -0.36
NEIL1-202ENST00000561643 METTL24Q5JXM2 366 aa12.79□□□□□ -0.36
NEIL1-202ENST00000561643 PI16Q6UXB8 463 aa12.79□□□□□ -0.36
NEIL1-202ENST00000561643 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.79□□□□□ -0.36
NEIL1-202ENST00000561643 DNAJC10Q8IXB1 793 aa12.79□□□□□ -0.36
NEIL1-202ENST00000561643 APPBP2Q92624 585 aa12.79□□□□□ -0.36
NEIL1-202ENST00000561643 UBR2Q8IWV8 1755 aa12.78□□□□□ -0.36
NEIL1-202ENST00000561643 KLF18A0A0U1RQI7 1052 aa12.78□□□□□ -0.36
NEIL1-202ENST00000561643 GOLGA8BA8MQT2 603 aa12.78□□□□□ -0.36
NEIL1-202ENST00000561643 FAM160A1Q05DH4 1040 aa12.78□□□□□ -0.36
NEIL1-202ENST00000561643 PUS7LQ9H0K6 701 aaKnown RBP12.78□□□□□ -0.36
NEIL1-202ENST00000561643 CLIP2Q9UDT6 1046 aa12.78□□□□□ -0.36
NEIL1-202ENST00000561643 TNS2Q63HR2 1409 aa12.78□□□□□ -0.36
NEIL1-202ENST00000561643 BECN2A8MW95 431 aa12.78□□□□□ -0.36
NEIL1-202ENST00000561643 CPLX1O14810 134 aa12.78□□□□□ -0.36
NEIL1-202ENST00000561643 DHX16O60231 1041 aaKnown RBP12.78□□□□□ -0.36
NEIL1-202ENST00000561643 SLFN14P0C7P3 912 aa12.78□□□□□ -0.36
NEIL1-202ENST00000561643 FDPSP14324 419 aaKnown RBP12.78□□□□□ -0.36
NEIL1-202ENST00000561643 LRMPQ12912 555 aa12.78□□□□□ -0.36
NEIL1-202ENST00000561643 OTUD7BQ6GQQ9 843 aa12.78□□□□□ -0.36
NEIL1-202ENST00000561643 C11orf57Q6ZUT1 292 aaPredicted RBP12.78□□□□□ -0.36
NEIL1-202ENST00000561643 RAB11FIP4Q86YS3 637 aa12.78□□□□□ -0.36
NEIL1-202ENST00000561643 ZBTB38Q8NAP3 1195 aaPredicted RBP12.78□□□□□ -0.36
NEIL1-202ENST00000561643 C8orf76Q96K31 380 aa12.78□□□□□ -0.36
NEIL1-202ENST00000561643 ERICH4A6NGS2 130 aa12.77□□□□□ -0.36
NEIL1-202ENST00000561643 FOXP2O15409 715 aa12.77□□□□□ -0.36
NEIL1-202ENST00000561643 GPTP24298 496 aa12.77□□□□□ -0.36
NEIL1-202ENST00000561643 TRIM28Q13263 835 aaKnown RBP12.77□□□□□ -0.36
NEIL1-202ENST00000561643 SNW1Q13573 536 aaKnown RBP12.77□□□□□ -0.36
NEIL1-202ENST00000561643 SF3A1Q15459 793 aaKnown RBP12.77□□□□□ -0.36
NEIL1-202ENST00000561643 ILDR1Q86SU0 546 aaPredicted RBP12.77□□□□□ -0.36
NEIL1-202ENST00000561643 TEX2Q8IWB9 1127 aa12.77□□□□□ -0.36
NEIL1-202ENST00000561643 NCOA7Q8NI08 942 aa12.77□□□□□ -0.36
NEIL1-202ENST00000561643 ASAP1Q9ULH1 1129 aa12.77□□□□□ -0.36
NEIL1-202ENST00000561643 SPEF2Q9C093 1822 aa12.77□□□□□ -0.36
NEIL1-202ENST00000561643 ZNF213O14771 459 aa12.77□□□□□ -0.37
NEIL1-202ENST00000561643 GPAA1O43292 621 aa12.77□□□□□ -0.37
NEIL1-202ENST00000561643 RGS22Q8NE09 1264 aa12.77□□□□□ -0.37
NEIL1-202ENST00000561643 CTIFO43310 598 aaKnown RBP12.77□□□□□ -0.37
NEIL1-202ENST00000561643 STARD3NLO95772 234 aa12.77□□□□□ -0.37
NEIL1-202ENST00000561643 LDHAL6AQ6ZMR3 332 aa12.77□□□□□ -0.37
NEIL1-202ENST00000561643 SYNE4Q8N205 404 aa12.77□□□□□ -0.37
NEIL1-202ENST00000561643 FBXL16Q8N461 479 aa12.77□□□□□ -0.37
NEIL1-202ENST00000561643 TEX13AQ9BXU3 409 aaPredicted RBP12.77□□□□□ -0.37
NEIL1-202ENST00000561643 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.77□□□□□ -0.374e-6■■■□□ 18.8
NEIL1-202ENST00000561643 ORC3Q9UBD5 711 aaPredicted RBP12.77□□□□□ -0.37
NEIL1-202ENST00000561643 POLR3DP05423 398 aaPredicted RBP12.76□□□□□ -0.37
NEIL1-202ENST00000561643 EVCP57679 992 aa12.76□□□□□ -0.37
NEIL1-202ENST00000561643 GABPB1Q06547 395 aaPredicted RBP12.76□□□□□ -0.37
NEIL1-202ENST00000561643 IQCB1Q15051 598 aa12.76□□□□□ -0.37
NEIL1-202ENST00000561643 STK38Q15208 465 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms