RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 H3BRB1 525 aa7.39□□□□□ -1.23
CASC4-211ENST00000561305 GSC2O15499 205 aa7.39□□□□□ -1.23
CASC4-211ENST00000561305 NLRP12P59046 1061 aa7.39□□□□□ -1.23
CASC4-211ENST00000561305 ARHGAP4P98171 946 aa7.39□□□□□ -1.23
CASC4-211ENST00000561305 IKBKEQ14164 716 aa7.39□□□□□ -1.23
CASC4-211ENST00000561305 TXNDC2Q86VQ3 553 aa7.39□□□□□ -1.23
CASC4-211ENST00000561305 GLYCTKQ8IVS8 523 aa7.39□□□□□ -1.23
CASC4-211ENST00000561305 GALNT12Q8IXK2 581 aa7.39□□□□□ -1.23
CASC4-211ENST00000561305 MYRFLQ96LU7 910 aa7.39□□□□□ -1.23
CASC4-211ENST00000561305 RNF208Q9H0X6 261 aa7.39□□□□□ -1.23
CASC4-211ENST00000561305 TUT1Q9H6E5 874 aaKnown RBP7.39□□□□□ -1.23
CASC4-211ENST00000561305 IGLV1-40P01703 118 aa7.38□□□□□ -1.23
CASC4-211ENST00000561305 ANKRD34AQ69YU3 496 aa7.38□□□□□ -1.23
CASC4-211ENST00000561305 UTP4Q969X6 686 aaKnown RBP7.38□□□□□ -1.23
CASC4-211ENST00000561305 RUSC1Q9BVN2 902 aa7.38□□□□□ -1.23
CASC4-211ENST00000561305 BRPF3Q9ULD4 1205 aa7.38□□□□□ -1.23
CASC4-211ENST00000561305 POLR3DP05423 398 aaPredicted RBP7.37□□□□□ -1.23
CASC4-211ENST00000561305 ESRRAP11474 423 aaPredicted RBP7.37□□□□□ -1.23
CASC4-211ENST00000561305 A0A1W2PP55 124 aa7.36□□□□□ -1.23
CASC4-211ENST00000561305 SUPT5HO00267 1087 aaKnown RBP7.36□□□□□ -1.23
CASC4-211ENST00000561305 PREPP48147 710 aa7.36□□□□□ -1.23
CASC4-211ENST00000561305 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.36□□□□□ -1.23
CASC4-211ENST00000561305 NBPF11Q86T75 865 aa7.36□□□□□ -1.23
CASC4-211ENST00000561305 CCNJLQ8IV13 435 aa7.36□□□□□ -1.23
CASC4-211ENST00000561305 FAM20CQ8IXL6 584 aa7.36□□□□□ -1.23
CASC4-211ENST00000561305 RETREG2Q8NC44 543 aa7.36□□□□□ -1.23
CASC4-211ENST00000561305 ASAP3Q8TDY4 903 aa7.36□□□□□ -1.23
CASC4-211ENST00000561305 CITED4Q96RK1 184 aa7.36□□□□□ -1.23
CASC4-211ENST00000561305 FAM129BQ96TA1 746 aa7.36□□□□□ -1.23
CASC4-211ENST00000561305 ARID3AQ99856 593 aa7.36□□□□□ -1.23
CASC4-211ENST00000561305 TMPRSS13Q9BYE2 586 aa7.36□□□□□ -1.23
CASC4-211ENST00000561305 C7orf69Q9H7B7 122 aa7.36□□□□□ -1.23
CASC4-211ENST00000561305 LOC100289279A0A1B0GTE1 492 aa7.35□□□□□ -1.23
CASC4-211ENST00000561305 METTL12A8MUP2 240 aa7.35□□□□□ -1.23
CASC4-211ENST00000561305 NDUFB5O43674 189 aa7.35□□□□□ -1.23
CASC4-211ENST00000561305 NEFLP07196 543 aa7.35□□□□□ -1.23
CASC4-211ENST00000561305 PDE4CQ08493 712 aa7.35□□□□□ -1.23
CASC4-211ENST00000561305 KIAA0319Q5VV43 1072 aa7.35□□□□□ -1.23
CASC4-211ENST00000561305 CLEC10AQ8IUN9 316 aa7.35□□□□□ -1.23
CASC4-211ENST00000561305 TRIM42Q8IWZ5 723 aa7.35□□□□□ -1.23
CASC4-211ENST00000561305 TCF12Q99081 682 aa7.35□□□□□ -1.23
CASC4-211ENST00000561305 HIF3AQ9Y2N7 669 aa7.35□□□□□ -1.23
CASC4-211ENST00000561305 A0A096LPE4 126 aa7.34□□□□□ -1.23
CASC4-211ENST00000561305 A0A1W2PPZ6 126 aa7.34□□□□□ -1.23
CASC4-211ENST00000561305 SART1O43290 800 aaKnown RBP7.34□□□□□ -1.23
CASC4-211ENST00000561305 IGHA2P01877 340 aa7.34□□□□□ -1.23
CASC4-211ENST00000561305 BMP3P12645 472 aa7.34□□□□□ -1.23
CASC4-211ENST00000561305 NFIAQ12857 509 aa7.34□□□□□ -1.23
CASC4-211ENST00000561305 PDE3BQ13370 1112 aa7.34□□□□□ -1.23
CASC4-211ENST00000561305 USPL1Q5W0Q7 1092 aa7.34□□□□□ -1.23
CASC4-211ENST00000561305 RNF43Q68DV7 783 aa7.34□□□□□ -1.23
CASC4-211ENST00000561305 FDX2Q6P4F2 183 aa7.34□□□□□ -1.23
CASC4-211ENST00000561305 FAM83CQ9BQN1 747 aa7.34□□□□□ -1.23
CASC4-211ENST00000561305 SUGCTQ9HAC7 445 aa7.34□□□□□ -1.23
CASC4-211ENST00000561305 HMX2A2RU54 273 aa7.33□□□□□ -1.24
CASC4-211ENST00000561305 EIF4EBP3O60516 100 aaPredicted RBP7.33□□□□□ -1.24
CASC4-211ENST00000561305 DLGAP3O95886 979 aa7.33□□□□□ -1.24
CASC4-211ENST00000561305 CD97P48960 835 aa7.33□□□□□ -1.24
CASC4-211ENST00000561305 ZDHHC13Q8IUH4 622 aa7.33□□□□□ -1.24
CASC4-211ENST00000561305 SMG8Q8ND04 991 aaKnown RBP7.33□□□□□ -1.24
CASC4-211ENST00000561305 KRTAP4-8Q9BYQ9 185 aa7.33□□□□□ -1.24
CASC4-211ENST00000561305 NRSN2Q9GZP1 204 aa7.33□□□□□ -1.24
CASC4-211ENST00000561305 LIN7BQ9HAP6 207 aa7.33□□□□□ -1.24
CASC4-211ENST00000561305 CPNE3O75131 537 aaKnown RBP7.32□□□□□ -1.24
CASC4-211ENST00000561305 TIAF1O95411 115 aa7.32□□□□□ -1.24
CASC4-211ENST00000561305 GRIA4P48058 902 aa7.32□□□□□ -1.24
CASC4-211ENST00000561305 PCDH1Q08174 1060 aa7.32□□□□□ -1.24
CASC4-211ENST00000561305 ZNF423Q2M1K9 1284 aa7.32□□□□□ -1.24
CASC4-211ENST00000561305 SPRED3Q2MJR0 410 aa7.32□□□□□ -1.24
CASC4-211ENST00000561305 BEND4Q6ZU67 534 aa7.32□□□□□ -1.24
CASC4-211ENST00000561305 DBNDD2Q9BQY9 259 aa7.32□□□□□ -1.24
CASC4-211ENST00000561305 USP26Q9BXU7 913 aa7.32□□□□□ -1.24
CASC4-211ENST00000561305 CLEC4MQ9H2X3 399 aaPredicted RBP7.32□□□□□ -1.24
CASC4-211ENST00000561305 TGFB1P01137 390 aa7.31□□□□□ -1.24
CASC4-211ENST00000561305 GSTM4Q03013 218 aa7.31□□□□□ -1.24
CASC4-211ENST00000561305 ORC1Q13415 861 aa7.31□□□□□ -1.24
CASC4-211ENST00000561305 EXOSC6Q5RKV6 272 aaKnown RBP7.31□□□□□ -1.24
CASC4-211ENST00000561305 NUTM2GQ5VZR2 741 aa7.31□□□□□ -1.24
CASC4-211ENST00000561305 CCER1Q8TC90 406 aaPredicted RBP7.31□□□□□ -1.24
CASC4-211ENST00000561305 CYP4F12Q9HCS2 524 aa7.31□□□□□ -1.24
CASC4-211ENST00000561305 MED26O95402 600 aa7.3□□□□□ -1.24
CASC4-211ENST00000561305 SSTR4P31391 388 aa7.3□□□□□ -1.24
CASC4-211ENST00000561305 C12orf50Q8NA57 414 aaPredicted RBP7.3□□□□□ -1.24
CASC4-211ENST00000561305 DNAJC25Q9H1X3 360 aa7.3□□□□□ -1.24
CASC4-211ENST00000561305 KCNF1Q9H3M0 494 aa7.3□□□□□ -1.24
CASC4-211ENST00000561305 PCMTD2Q9NV79 361 aa7.3□□□□□ -1.24
CASC4-211ENST00000561305 PRR19A6NJB7 356 aa7.29□□□□□ -1.24
CASC4-211ENST00000561305 KIAA1324LA8MWY0 1029 aaPredicted RBP7.29□□□□□ -1.24
CASC4-211ENST00000561305 GPR182O15218 404 aa7.29□□□□□ -1.24
CASC4-211ENST00000561305 GAS2O43903 313 aaKnown RBP7.29□□□□□ -1.24
CASC4-211ENST00000561305 COBLO75128 1261 aa7.29□□□□□ -1.24
CASC4-211ENST00000561305 ITPKAP23677 461 aa7.29□□□□□ -1.24
CASC4-211ENST00000561305 MAP4P27816 1152 aaKnown RBP7.29□□□□□ -1.24
CASC4-211ENST00000561305 PSMG3-AS1Q96PY0 264 aa7.29□□□□□ -1.24
CASC4-211ENST00000561305 RBCK1Q9BYM8 510 aa7.29□□□□□ -1.24
CASC4-211ENST00000561305 EIF1AYO14602 144 aaKnown RBP7.28□□□□□ -1.24
CASC4-211ENST00000561305 PTPN12Q05209 780 aaKnown RBP7.28□□□□□ -1.24
CASC4-211ENST00000561305 SGO2Q562F6 1265 aa7.28□□□□□ -1.24
CASC4-211ENST00000561305 SHKBP1Q8TBC3 707 aa7.28□□□□□ -1.24
CASC4-211ENST00000561305 ALKBH8Q96BT7 664 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms