RNA–Protein interactions for RNA: ENST00000560731.5

MARK3-222, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-222ENST00000560731 HDAC1Q13547 482 aaPredicted RBP9.71□□□□□ -0.86
MARK3-222ENST00000560731 VPS72Q15906 364 aa9.71□□□□□ -0.86
MARK3-222ENST00000560731 PBXIP1Q96AQ6 731 aa9.71□□□□□ -0.86
MARK3-222ENST00000560731 ZNF496Q96IT1 587 aaPredicted RBP9.71□□□□□ -0.86
MARK3-222ENST00000560731 NGLY1Q96IV0 654 aa9.71□□□□□ -0.86
MARK3-222ENST00000560731 FMNL2Q96PY5 1086 aa9.71□□□□□ -0.86
MARK3-222ENST00000560731 TFIP11Q9UBB9 837 aaKnown RBP9.71□□□□□ -0.86
MARK3-222ENST00000560731 DBF4Q9UBU7 674 aaPredicted RBP9.71□□□□□ -0.86
MARK3-222ENST00000560731 CACNA1FO60840 1977 aa9.7□□□□□ -0.86
MARK3-222ENST00000560731 MAGEB6P1A0A0J9YX57 407 aa9.7□□□□□ -0.86
MARK3-222ENST00000560731 TERTO14746 1132 aaKnown RBP9.7□□□□□ -0.86
MARK3-222ENST00000560731 RFX1P22670 979 aa9.7□□□□□ -0.86
MARK3-222ENST00000560731 HSPA1LP34931 641 aa9.7□□□□□ -0.86
MARK3-222ENST00000560731 CCT4P50991 539 aaKnown RBP9.7□□□□□ -0.86
MARK3-222ENST00000560731 NFX1Q12986 1120 aaKnown RBP9.7□□□□□ -0.86
MARK3-222ENST00000560731 MRPL14Q6P1L8 145 aaKnown RBP9.7□□□□□ -0.86
MARK3-222ENST00000560731 TTC5Q8N0Z6 440 aa9.7□□□□□ -0.86
MARK3-222ENST00000560731 PHAXQ9H814 394 aaKnown RBP9.7□□□□□ -0.86
MARK3-222ENST00000560731 DDX21Q9NR30 783 aaKnown RBP eCLIP9.7□□□□□ -0.86
MARK3-222ENST00000560731 HYPKQ9NX55 129 aa9.7□□□□□ -0.86
MARK3-222ENST00000560731 CHPF2Q9P2E5 772 aa9.7□□□□□ -0.86
MARK3-222ENST00000560731 VIRMAQ69YN4 1812 aaKnown RBP9.7□□□□□ -0.86
MARK3-222ENST00000560731 PRAMEF22A3QJZ6 481 aa9.69□□□□□ -0.86
MARK3-222ENST00000560731 ZIC2O95409 532 aaPredicted RBP9.69□□□□□ -0.86
MARK3-222ENST00000560731 TBC1D9Q6ZT07 1266 aa9.69□□□□□ -0.86
MARK3-222ENST00000560731 VASH1Q7L8A9 365 aaPredicted RBP9.69□□□□□ -0.86
MARK3-222ENST00000560731 BCL9LQ86UU0 1499 aa9.69□□□□□ -0.86
MARK3-222ENST00000560731 ZFP42Q96MM3 310 aa9.69□□□□□ -0.86
MARK3-222ENST00000560731 ARHGAP9Q9BRR9 750 aa9.69□□□□□ -0.86
MARK3-222ENST00000560731 CDV3Q9UKY7 258 aaKnown RBP9.69□□□□□ -0.86
MARK3-222ENST00000560731 NWD2Q9ULI1 1742 aa9.69□□□□□ -0.86
MARK3-222ENST00000560731 USP16Q9Y5T5 823 aa9.69□□□□□ -0.86
MARK3-222ENST00000560731 NRAPQ86VF7 1730 aa9.68□□□□□ -0.86
MARK3-222ENST00000560731 SHANK3Q9BYB0 1731 aa9.68□□□□□ -0.86
MARK3-222ENST00000560731 PLCH1Q4KWH8 1693 aa9.68□□□□□ -0.86
MARK3-222ENST00000560731 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.68□□□□□ -0.86
MARK3-222ENST00000560731 F6X3S4 739 aa9.68□□□□□ -0.86
MARK3-222ENST00000560731 NR3C2P08235 984 aa9.68□□□□□ -0.86
MARK3-222ENST00000560731 PDIA4P13667 645 aaKnown RBP9.68□□□□□ -0.86
MARK3-222ENST00000560731 LMOD1P29536 600 aaPredicted RBP9.68□□□□□ -0.86
MARK3-222ENST00000560731 FKBP5Q13451 457 aaPredicted RBP9.68□□□□□ -0.86
MARK3-222ENST00000560731 ERFEQ4G0M1 354 aa9.68□□□□□ -0.86
MARK3-222ENST00000560731 RETREG2Q8NC44 543 aa9.68□□□□□ -0.86
MARK3-222ENST00000560731 ADAM32Q8TC27 787 aa9.68□□□□□ -0.86
MARK3-222ENST00000560731 PIGBQ92521 554 aa9.68□□□□□ -0.86
MARK3-222ENST00000560731 ZNF592Q92610 1267 aa9.68□□□□□ -0.86
MARK3-222ENST00000560731 C8orf37Q96NL8 207 aa9.68□□□□□ -0.86
MARK3-222ENST00000560731 MAFBQ9Y5Q3 323 aaPredicted RBP9.68□□□□□ -0.86
MARK3-222ENST00000560731 ATP9BO43861 1147 aa9.67□□□□□ -0.86
MARK3-222ENST00000560731 MCCD1P59942 119 aaPredicted RBP9.67□□□□□ -0.86
MARK3-222ENST00000560731 DDB1Q16531 1140 aa9.67□□□□□ -0.86
MARK3-222ENST00000560731 KSR2Q6VAB6 950 aa9.67□□□□□ -0.86
MARK3-222ENST00000560731 LRP10Q7Z4F1 713 aa9.67□□□□□ -0.86
MARK3-222ENST00000560731 NPAS3Q8IXF0 933 aa9.67□□□□□ -0.86
MARK3-222ENST00000560731 ITPKCQ96DU7 683 aa9.67□□□□□ -0.86
MARK3-222ENST00000560731 TMOD3Q9NYL9 352 aa9.67□□□□□ -0.86
MARK3-222ENST00000560731 TNS2Q63HR2 1409 aa9.66□□□□□ -0.86
MARK3-222ENST00000560731 ERBB4Q15303 1308 aa9.66□□□□□ -0.86
MARK3-222ENST00000560731 PI4KAP2A4QPH2 592 aa9.66□□□□□ -0.86
MARK3-222ENST00000560731 PIK3CDO00329 1044 aa9.66□□□□□ -0.86
MARK3-222ENST00000560731 PROSER3Q2NL68 480 aa9.66□□□□□ -0.86
MARK3-222ENST00000560731 ZBTB33Q86T24 672 aa9.66□□□□□ -0.86
MARK3-222ENST00000560731 SIRT2Q8IXJ6 389 aa9.66□□□□□ -0.86
MARK3-222ENST00000560731 RPAP2Q8IXW5 612 aaPredicted RBP9.66□□□□□ -0.86
MARK3-222ENST00000560731 SMC5Q8IY18 1101 aa9.66□□□□□ -0.86
MARK3-222ENST00000560731 PI4KAP1Q8N8J0 262 aa9.66□□□□□ -0.86
MARK3-222ENST00000560731 MARCH10Q8NA82 808 aaPredicted RBP9.66□□□□□ -0.86
MARK3-222ENST00000560731 SLC16A10Q8TF71 515 aa9.66□□□□□ -0.86
MARK3-222ENST00000560731 DNAAF4Q8WXU2 420 aa9.66□□□□□ -0.86
MARK3-222ENST00000560731 ATG3Q9NT62 314 aa9.66□□□□□ -0.86
MARK3-222ENST00000560731 NXF1Q9UBU9 619 aaKnown RBP9.66□□□□□ -0.86
MARK3-222ENST00000560731 PCDHB9Q9Y5E1 797 aa9.66□□□□□ -0.86
MARK3-222ENST00000560731 LRP6O75581 1613 aa9.65□□□□□ -0.86
MARK3-222ENST00000560731 UPP2O95045 317 aa9.65□□□□□ -0.86
MARK3-222ENST00000560731 ANXA1P04083 346 aa9.65□□□□□ -0.86
MARK3-222ENST00000560731 GNAI3P08754 354 aa9.65□□□□□ -0.86
MARK3-222ENST00000560731 FSHRP23945 695 aa9.65□□□□□ -0.86
MARK3-222ENST00000560731 BEND3Q5T5X7 828 aa9.65□□□□□ -0.86
MARK3-222ENST00000560731 SLC4A10Q6U841 1118 aa9.65□□□□□ -0.86
MARK3-222ENST00000560731 ANKRD44Q8N8A2 993 aa9.65□□□□□ -0.86
MARK3-222ENST00000560731 MEIS3Q99687 375 aa9.65□□□□□ -0.86
MARK3-222ENST00000560731 TEX13AQ9BXU3 409 aaPredicted RBP9.65□□□□□ -0.86
MARK3-222ENST00000560731 USP44Q9H0E7 712 aa9.65□□□□□ -0.86
MARK3-222ENST00000560731 ZFAND3Q9H8U3 227 aa9.65□□□□□ -0.86
MARK3-222ENST00000560731 USP21Q9UK80 565 aa9.65□□□□□ -0.86
MARK3-222ENST00000560731 ASAP1Q9ULH1 1129 aa9.65□□□□□ -0.86
MARK3-222ENST00000560731 CCDC9Q9Y3X0 531 aaKnown RBP9.65□□□□□ -0.86
MARK3-222ENST00000560731 BCL9O00512 1426 aa9.65□□□□□ -0.87
MARK3-222ENST00000560731 IBTKQ9P2D0 1353 aaPredicted RBP9.64□□□□□ -0.87
MARK3-222ENST00000560731 ALDH1L1O75891 902 aa9.64□□□□□ -0.87
MARK3-222ENST00000560731 DDX58O95786 925 aaKnown RBP9.64□□□□□ -0.87
MARK3-222ENST00000560731 CCDC116Q8IYX3 515 aa9.64□□□□□ -0.87
MARK3-222ENST00000560731 SLC10A4Q96EP9 437 aa9.64□□□□□ -0.87
MARK3-222ENST00000560731 PURBQ96QR8 312 aaKnown RBP9.64□□□□□ -0.87
MARK3-222ENST00000560731 TRAIPQ9BWF2 469 aa9.64□□□□□ -0.87
MARK3-222ENST00000560731 SRCIN1Q9C0H9 1055 aa9.64□□□□□ -0.87
MARK3-222ENST00000560731 CEP126Q9P2H0 1117 aa9.64□□□□□ -0.87
MARK3-222ENST00000560731 KCPQ6ZWJ8 1503 aa9.64□□□□□ -0.87
MARK3-222ENST00000560731 PXDNLA1KZ92 1463 aa9.64□□□□□ -0.87
MARK3-222ENST00000560731 ADCY9O60503 1353 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms