RNA–Protein interactions for RNA: ENST00000559378.4

HMGN2P47-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 47, humanhuman

BASIC

Gene HMGN2P47, Length 272 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P47-201ENST00000559378 DDX10Q13206 875 aaKnown RBP6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 TTC31Q49AM3 519 aaPredicted RBP6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 CCDC152Q4G0S7 254 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 SLC10A5Q5PT55 438 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 FAM83BQ5T0W9 1011 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 ARMC4Q5T2S8 1044 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 CYP26C1Q6V0L0 522 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 SPATS2Q86XZ4 545 aaKnown RBP6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 KIAA0825Q8IV33 1275 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 TMEM87AQ8NBN3 555 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 CHMP7Q8WUX9 453 aaPredicted RBP6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 ANKRD49Q8WVL7 239 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 NUDT16Q96DE0 195 aaKnown RBP6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 BICD1Q96G01 975 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 CEP95Q96GE4 821 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 NEK1Q96PY6 1258 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 ZNF304Q9HCX3 659 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 POLR3EQ9NVU0 708 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 C9orf78Q9NZ63 289 aaPredicted RBP6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 EPS15L1Q9UBC2 864 aa6.87□□□□□ -1.31
HMGN2P47-201ENST00000559378 LINC00854A0A1B0GVQ3 168 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 A6NCN8 305 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 DYNC1I1O14576 645 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 NR1I2O75469 434 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 ATF3P18847 181 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 ATP6V1AP38606 617 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 CAP2P40123 477 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 RFC5P40937 340 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 PLA2G4AP47712 749 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 SARSP49591 514 aaKnown RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 NLRP12P59046 1061 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 LRRC41Q15345 812 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 RABL6Q3YEC7 729 aaPredicted RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 SPDYCQ5MJ68 293 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 CCDC122Q5T0U0 273 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 PRPF38BQ5VTL8 546 aaKnown RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 RNF20Q5VTR2 975 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 NEK10Q6ZWH5 1172 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 CCDC80Q76M96 950 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 BEND5Q7L4P6 421 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 C14orf80Q86SX3 495 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 LILRB2Q8N423 598 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 ANKRD42Q8N9B4 389 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 BRSK1Q8TDC3 778 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 USP33Q8TEY7 942 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 IPCEF1Q8WWN9 437 aaPredicted RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 ZNF75CPQ92670 426 aaPredicted RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 NAF1Q96HR8 494 aaKnown RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 DHTKD1Q96HY7 919 aaPredicted RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 C2orf49Q9BVC5 232 aaPredicted RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 UTP14AQ9BVJ6 771 aaKnown RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 C12orf49Q9H741 205 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 PLEKHA5Q9HAU0 1116 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 TCF7L2Q9NQB0 619 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 KCTD5Q9NXV2 234 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 CHMP5Q9NZZ3 219 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 TBC1D7Q9P0N9 293 aa6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 PA2G4Q9UQ80 394 aaKnown RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 MORC2Q9Y6X9 1032 aaPredicted RBP6.86□□□□□ -1.31
HMGN2P47-201ENST00000559378 A0A0B4J203 849 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 C2orf81A6NN90 581 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 SPTLC2O15270 562 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 CLASP2O75122 1294 aaKnown RBP6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 SKAP2O75563 359 aaPredicted RBP6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 FCHSD2O94868 740 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 SASH1O94885 1247 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 GLULP15104 373 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 NDUFV2P19404 249 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 INPP5BP32019 993 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 HPDP32754 393 aaPredicted RBP6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 HSPA4P34932 840 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 CSE1LP55060 971 aaKnown RBP6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 HSD17B7P56937 341 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 RIPK4P57078 832 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 GABPB1Q06547 395 aaPredicted RBP6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 PDE4BQ07343 736 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 STK3Q13188 491 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 CNGA3Q16281 694 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 TMEM259Q4ZIN3 620 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 C10orf76Q5T2E6 689 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 ANO1Q5XXA6 986 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 ISM2Q6H9L7 571 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 FIP1L1Q6UN15 594 aaKnown RBP6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 MMS22LQ6ZRQ5 1243 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 CCDC129Q6ZRS4 1044 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 PODNQ7Z5L7 613 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 SRLQ86TD4 932 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 TRIM42Q8IWZ5 723 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 KRT222Q8N1A0 295 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 PGBD3Q8N328 593 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 ZNF280CQ8ND82 737 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 RSAD2Q8WXG1 361 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 RNF34Q969K3 372 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 MOGAT1Q96PD6 335 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 SH3GL1Q99961 368 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 TACO1Q9BSH4 297 aaKnown RBP6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 YIPF2Q9BWQ6 316 aa6.85□□□□□ -1.31
HMGN2P47-201ENST00000559378 TSPYL2Q9H2G4 693 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms