RNA–Protein interactions for RNA: ENST00000559099.5

HMG20A-208, Transcript of high mobility group 20A, humanhuman

TSL 5

Gene HMG20A, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-208ENST00000559099 ECM29Q5VYK3 1845 aa10.34□□□□□ -0.75
HMG20A-208ENST00000559099 DDX60LQ5H9U9 1706 aaKnown RBP10.33□□□□□ -0.76
HMG20A-208ENST00000559099 PRKCZQ05513 592 aa10.33□□□□□ -0.76
HMG20A-208ENST00000559099 C17orf99Q6UX52 265 aa10.33□□□□□ -0.76
HMG20A-208ENST00000559099 LRP10Q7Z4F1 713 aa10.33□□□□□ -0.76
HMG20A-208ENST00000559099 ALYREFQ86V81 257 aaKnown RBP10.33□□□□□ -0.76
HMG20A-208ENST00000559099 ANKRD13AQ8IZ07 590 aa10.33□□□□□ -0.76
HMG20A-208ENST00000559099 OGFOD1Q8N543 542 aa10.33□□□□□ -0.76
HMG20A-208ENST00000559099 TTYH1Q9H313 450 aaPredicted RBP10.33□□□□□ -0.76
HMG20A-208ENST00000559099 PAK6Q9NQU5 681 aaPredicted RBP10.33□□□□□ -0.76
HMG20A-208ENST00000559099 COL3A1P02461 1466 aaPredicted RBP10.33□□□□□ -0.76
HMG20A-208ENST00000559099 SH3TC1Q8TE82 1336 aa10.33□□□□□ -0.76
HMG20A-208ENST00000559099 ADGRA2Q96PE1 1338 aa10.33□□□□□ -0.76
HMG20A-208ENST00000559099 FOSL2P15408 326 aa10.32□□□□□ -0.76
HMG20A-208ENST00000559099 IREB2P48200 963 aaKnown RBP10.32□□□□□ -0.76
HMG20A-208ENST00000559099 NBPF12Q5TAG4 269 aaPredicted RBP10.32□□□□□ -0.76
HMG20A-208ENST00000559099 MCM10Q7L590 875 aa10.32□□□□□ -0.76
HMG20A-208ENST00000559099 SLAIN1Q8ND83 568 aa10.32□□□□□ -0.76
HMG20A-208ENST00000559099 PHACTR3Q96KR7 559 aa10.32□□□□□ -0.76
HMG20A-208ENST00000559099 DIAPH1O60610 1272 aaKnown RBP10.31□□□□□ -0.76
HMG20A-208ENST00000559099 INHAP05111 366 aa10.31□□□□□ -0.76
HMG20A-208ENST00000559099 CAPN2P17655 700 aa10.31□□□□□ -0.76
HMG20A-208ENST00000559099 GTF2A2P52657 109 aa10.31□□□□□ -0.76
HMG20A-208ENST00000559099 SF3B3Q15393 1217 aaKnown RBP10.31□□□□□ -0.76
HMG20A-208ENST00000559099 PODNQ7Z5L7 613 aa10.31□□□□□ -0.76
HMG20A-208ENST00000559099 ADAMTS19Q8TE59 1207 aa10.31□□□□□ -0.76
HMG20A-208ENST00000559099 ZNF428Q96B54 188 aa10.31□□□□□ -0.76
HMG20A-208ENST00000559099 PANK3Q9H999 370 aa10.31□□□□□ -0.76
HMG20A-208ENST00000559099 TRMT112Q9UI30 125 aaKnown RBP10.31□□□□□ -0.76
HMG20A-208ENST00000559099 GGA1Q9UJY5 639 aa10.31□□□□□ -0.76
HMG20A-208ENST00000559099 HCN4Q9Y3Q4 1203 aa10.31□□□□□ -0.76
HMG20A-208ENST00000559099 PPP2R3BQ9Y5P8 575 aa10.31□□□□□ -0.76
HMG20A-208ENST00000559099 MGAMO43451 1857 aa10.31□□□□□ -0.76
HMG20A-208ENST00000559099 BTBD19C9JJ37 291 aa10.3□□□□□ -0.76
HMG20A-208ENST00000559099 FMNL1O95466 1100 aaPredicted RBP10.3□□□□□ -0.76
HMG20A-208ENST00000559099 ELNP15502 786 aa10.3□□□□□ -0.76
HMG20A-208ENST00000559099 HOXD10P28358 340 aa10.3□□□□□ -0.76
HMG20A-208ENST00000559099 MDM2Q00987 491 aaPredicted RBP10.3□□□□□ -0.76
HMG20A-208ENST00000559099 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.3□□□□□ -0.76
HMG20A-208ENST00000559099 ZCCHC17Q9NP64 241 aaKnown RBP10.3□□□□□ -0.76
HMG20A-208ENST00000559099 MIS18AQ9NYP9 233 aa10.3□□□□□ -0.76
HMG20A-208ENST00000559099 ANKIB1Q9P2G1 1089 aa10.3□□□□□ -0.76
HMG20A-208ENST00000559099 CPA4Q9UI42 421 aa10.3□□□□□ -0.76
HMG20A-208ENST00000559099 GABRQQ9UN88 632 aa10.3□□□□□ -0.76
HMG20A-208ENST00000559099 REV3LO60673 3130 aa10.3□□□□□ -0.76
HMG20A-208ENST00000559099 ZNF804BA4D1E1 1349 aa10.3□□□□□ -0.76
HMG20A-208ENST00000559099 RPS8P62241 208 aaKnown RBP10.29□□□□□ -0.76
HMG20A-208ENST00000559099 DCTN1Q14203 1278 aa10.29□□□□□ -0.76
HMG20A-208ENST00000559099 SUPT20HL1Q3ZLR7 823 aa10.29□□□□□ -0.76
HMG20A-208ENST00000559099 HELBQ8NG08 1087 aaPredicted RBP10.29□□□□□ -0.76
HMG20A-208ENST00000559099 THUMPD2Q9BTF0 503 aaKnown RBP10.29□□□□□ -0.76
HMG20A-208ENST00000559099 C1QTNF1Q9BXJ1 281 aa10.29□□□□□ -0.76
HMG20A-208ENST00000559099 PCDHAC2Q9Y5I4 1007 aa10.29□□□□□ -0.76
HMG20A-208ENST00000559099 AOX1Q06278 1338 aa10.29□□□□□ -0.76
HMG20A-208ENST00000559099 MYO3BQ8WXR4 1341 aa10.29□□□□□ -0.76
HMG20A-208ENST00000559099 WDFY4Q6ZS81 3184 aa10.28□□□□□ -0.76
HMG20A-208ENST00000559099 ADCY3O60266 1144 aa10.28□□□□□ -0.76
HMG20A-208ENST00000559099 WDHD1O75717 1129 aaPredicted RBP10.28□□□□□ -0.76
HMG20A-208ENST00000559099 VGLL4Q14135 290 aa10.28□□□□□ -0.76
HMG20A-208ENST00000559099 KIAA0825Q8IV33 1275 aa10.28□□□□□ -0.76
HMG20A-208ENST00000559099 ANKLE1Q8NAG6 615 aa10.28□□□□□ -0.76
HMG20A-208ENST00000559099 UHRF1Q96T88 793 aaPredicted RBP10.28□□□□□ -0.76
HMG20A-208ENST00000559099 LRFN3Q9BTN0 628 aa10.28□□□□□ -0.76
HMG20A-208ENST00000559099 USP34Q70CQ2 3546 aa10.28□□□□□ -0.76
HMG20A-208ENST00000559099 MMP14P50281 582 aa10.27□□□□□ -0.77
HMG20A-208ENST00000559099 PDIA6Q15084 440 aa10.27□□□□□ -0.77
HMG20A-208ENST00000559099 PROSER3Q2NL68 480 aa10.27□□□□□ -0.77
HMG20A-208ENST00000559099 STRIP1Q5VSL9 837 aa10.27□□□□□ -0.77
HMG20A-208ENST00000559099 CDAN1Q8IWY9 1227 aa10.27□□□□□ -0.77
HMG20A-208ENST00000559099 POLR3GLQ9BT43 218 aa10.27□□□□□ -0.77
HMG20A-208ENST00000559099 NBPF3Q9H094 633 aa10.27□□□□□ -0.77
HMG20A-208ENST00000559099 PFASO15067 1338 aa10.27□□□□□ -0.77
HMG20A-208ENST00000559099 CLRN2A0PK11 232 aa10.26□□□□□ -0.77
HMG20A-208ENST00000559099 CETPP11597 493 aa10.26□□□□□ -0.77
HMG20A-208ENST00000559099 FBXW7Q969H0 707 aa10.26□□□□□ -0.77
HMG20A-208ENST00000559099 ASB2Q96Q27 587 aa10.26□□□□□ -0.77
HMG20A-208ENST00000559099 C11orf49Q9H6J7 331 aa10.26□□□□□ -0.77
HMG20A-208ENST00000559099 SEC31BQ9NQW1 1179 aa10.26□□□□□ -0.77
HMG20A-208ENST00000559099 LTBP2Q14767 1821 aa10.26□□□□□ -0.77
HMG20A-208ENST00000559099 MED23Q9ULK4 1368 aa10.26□□□□□ -0.77
HMG20A-208ENST00000559099 SPDYE5A6NIY4 337 aa10.25□□□□□ -0.77
HMG20A-208ENST00000559099 U2SURPO15042 1029 aaKnown RBP10.25□□□□□ -0.77
HMG20A-208ENST00000559099 EIF4A1P60842 406 aaKnown RBP10.25□□□□□ -0.77
HMG20A-208ENST00000559099 RASA3Q14644 834 aa10.25□□□□□ -0.77
HMG20A-208ENST00000559099 TAF7Q15545 349 aaPredicted RBP10.25□□□□□ -0.77
HMG20A-208ENST00000559099 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.25□□□□□ -0.77
HMG20A-208ENST00000559099 PXYLP1Q8TE99 480 aa10.25□□□□□ -0.77
HMG20A-208ENST00000559099 ATXN2LQ8WWM7 1075 aaKnown RBP10.25□□□□□ -0.77
HMG20A-208ENST00000559099 FAM89AQ96GI7 184 aa10.25□□□□□ -0.77
HMG20A-208ENST00000559099 P2RX7Q99572 595 aaKnown RBP10.25□□□□□ -0.77
HMG20A-208ENST00000559099 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.25□□□□□ -0.77
HMG20A-208ENST00000559099 XDHP47989 1333 aa10.25□□□□□ -0.77
HMG20A-208ENST00000559099 ANXA1P04083 346 aa10.24□□□□□ -0.77
HMG20A-208ENST00000559099 PRKAR2BP31323 418 aa10.24□□□□□ -0.77
HMG20A-208ENST00000559099 FLT3LGP49771 235 aa10.24□□□□□ -0.77
HMG20A-208ENST00000559099 MRE11P49959 708 aa10.24□□□□□ -0.77
HMG20A-208ENST00000559099 FCGRTP55899 365 aa10.24□□□□□ -0.77
HMG20A-208ENST00000559099 DLGAP5Q15398 846 aa10.24□□□□□ -0.77
HMG20A-208ENST00000559099 HSP90AB3PQ58FF7 597 aa10.24□□□□□ -0.77
HMG20A-208ENST00000559099 MTMR14Q8NCE2 650 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms