RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 CDK19Q9BWU1 502 aa6.53□□□□□ -1.36
ATXN3-237ENST00000556274 CFHR5Q9BXR6 569 aa6.53□□□□□ -1.36
ATXN3-237ENST00000556274 COL25A1Q9BXS0 654 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-237ENST00000556274 CNTNAP3Q9BZ76 1288 aa6.53□□□□□ -1.36
ATXN3-237ENST00000556274 SAP130Q9H0E3 1048 aa6.53□□□□□ -1.36
ATXN3-237ENST00000556274 PHF24Q9UPV7 400 aa6.53□□□□□ -1.36
ATXN3-237ENST00000556274 ROCK2O75116 1388 aaKnown RBP6.53□□□□□ -1.36
ATXN3-237ENST00000556274 FAM135BQ49AJ0 1406 aa6.52□□□□□ -1.37
ATXN3-237ENST00000556274 ADGRL3Q9HAR2 1447 aa6.52□□□□□ -1.37
ATXN3-237ENST00000556274 ASXL1Q8IXJ9 1541 aa6.52□□□□□ -1.37
ATXN3-237ENST00000556274 KHNYNO15037 678 aaKnown RBP6.52□□□□□ -1.37
ATXN3-237ENST00000556274 BNIP3LO60238 219 aa6.52□□□□□ -1.37
ATXN3-237ENST00000556274 SAMD5Q5TGI4 173 aa6.52□□□□□ -1.37
ATXN3-237ENST00000556274 C16orf46Q6P387 395 aa6.52□□□□□ -1.37
ATXN3-237ENST00000556274 NGDNQ8NEJ9 315 aaKnown RBP6.52□□□□□ -1.37
ATXN3-237ENST00000556274 MYO19Q96H55 970 aa6.52□□□□□ -1.37
ATXN3-237ENST00000556274 LRFN2Q9ULH4 789 aa6.52□□□□□ -1.37
ATXN3-237ENST00000556274 ATXN7L1Q9ULK2 861 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-237ENST00000556274 NRXN1Q9ULB1 1477 aa6.52□□□□□ -1.37
ATXN3-237ENST00000556274 PRAG1Q86YV5 1406 aa6.51□□□□□ -1.37
ATXN3-237ENST00000556274 ITSN1Q15811 1721 aa6.51□□□□□ -1.37
ATXN3-237ENST00000556274 DCDC2BA2VCK2 349 aa6.51□□□□□ -1.37
ATXN3-237ENST00000556274 TNP2Q05952 138 aa6.51□□□□□ -1.37
ATXN3-237ENST00000556274 RNFT1Q5M7Z0 435 aa6.51□□□□□ -1.37
ATXN3-237ENST00000556274 KRT28Q7Z3Y7 464 aa6.51□□□□□ -1.37
ATXN3-237ENST00000556274 LRRC59Q96AG4 307 aaKnown RBP6.51□□□□□ -1.37
ATXN3-237ENST00000556274 IFT43Q96FT9 208 aa6.51□□□□□ -1.37
ATXN3-237ENST00000556274 CEP63Q96MT8 703 aa6.51□□□□□ -1.37
ATXN3-237ENST00000556274 POLR3GLQ9BT43 218 aa6.51□□□□□ -1.37
ATXN3-237ENST00000556274 MTMR7Q9Y216 660 aa6.51□□□□□ -1.37
ATXN3-237ENST00000556274 KAT6BQ8WYB5 2073 aa6.51□□□□□ -1.37
ATXN3-237ENST00000556274 CENPJQ9HC77 1338 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-237ENST00000556274 MST1RQ04912 1400 aa6.5□□□□□ -1.37
ATXN3-237ENST00000556274 PTCH1Q13635 1447 aa6.5□□□□□ -1.37
ATXN3-237ENST00000556274 C1orf167Q5SNV9 1468 aa6.5□□□□□ -1.37
ATXN3-237ENST00000556274 TGFBR3LH3BV60 316 aa6.5□□□□□ -1.37
ATXN3-237ENST00000556274 ADAMTS2O95450 1211 aa6.5□□□□□ -1.37
ATXN3-237ENST00000556274 MAPTP10636 758 aaKnown RBP6.5□□□□□ -1.37
ATXN3-237ENST00000556274 GAS6Q14393 721 aa6.5□□□□□ -1.37
ATXN3-237ENST00000556274 KANK3Q6NY19 840 aa6.5□□□□□ -1.37
ATXN3-237ENST00000556274 BTLAQ7Z6A9 289 aa6.5□□□□□ -1.37
ATXN3-237ENST00000556274 GTF3C2Q8WUA4 911 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-237ENST00000556274 NUDT16Q96DE0 195 aaKnown RBP6.5□□□□□ -1.37
ATXN3-237ENST00000556274 NDFIP2Q9NV92 336 aa6.5□□□□□ -1.37
ATXN3-237ENST00000556274 BCS1LQ9Y276 419 aa6.5□□□□□ -1.37
ATXN3-237ENST00000556274 NHSL1Q5SYE7 1610 aa6.5□□□□□ -1.37
ATXN3-237ENST00000556274 ADGRB1O14514 1584 aa6.49□□□□□ -1.37
ATXN3-237ENST00000556274 ARHGEF15O94989 841 aa6.49□□□□□ -1.37
ATXN3-237ENST00000556274 FAM157BP0CG42 384 aa6.49□□□□□ -1.37
ATXN3-237ENST00000556274 PDIA4P13667 645 aaKnown RBP6.49□□□□□ -1.37
ATXN3-237ENST00000556274 MX2P20592 715 aa6.49□□□□□ -1.37
ATXN3-237ENST00000556274 FGFR3P22607 806 aa6.49□□□□□ -1.37
ATXN3-237ENST00000556274 BRD2P25440 801 aaKnown RBP6.49□□□□□ -1.37
ATXN3-237ENST00000556274 ARID4AP29374 1257 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-237ENST00000556274 NUTM2GQ5VZR2 741 aa6.49□□□□□ -1.37
ATXN3-237ENST00000556274 SVOPQ8N4V2 548 aa6.49□□□□□ -1.37
ATXN3-237ENST00000556274 TMC1Q8TDI8 760 aa6.49□□□□□ -1.37
ATXN3-237ENST00000556274 WHAMMQ8TF30 809 aa6.49□□□□□ -1.37
ATXN3-237ENST00000556274 STIM2Q9P246 746 aa6.49□□□□□ -1.37
ATXN3-237ENST00000556274 ZBTB7CA1YPR0 619 aa6.48□□□□□ -1.37
ATXN3-237ENST00000556274 MICAL2O94851 1124 aa6.48□□□□□ -1.37
ATXN3-237ENST00000556274 BRD1O95696 1058 aa6.48□□□□□ -1.37
ATXN3-237ENST00000556274 ABL1P00519 1130 aa6.48□□□□□ -1.37
ATXN3-237ENST00000556274 CTBSQ01459 385 aa6.48□□□□□ -1.37
ATXN3-237ENST00000556274 IER5Q5VY09 327 aa6.48□□□□□ -1.37
ATXN3-237ENST00000556274 TRAIPQ9BWF2 469 aa6.48□□□□□ -1.37
ATXN3-237ENST00000556274 BRD7Q9NPI1 651 aa6.48□□□□□ -1.37
ATXN3-237ENST00000556274 STRN4Q9NRL3 753 aa6.48□□□□□ -1.37
ATXN3-237ENST00000556274 MBIPQ9NS73 344 aa6.48□□□□□ -1.37
ATXN3-237ENST00000556274 MARK1Q9P0L2 795 aa6.48□□□□□ -1.37
ATXN3-237ENST00000556274 NSFL1CQ9UNZ2 370 aaKnown RBP6.48□□□□□ -1.37
ATXN3-237ENST00000556274 DLC1Q96QB1 1528 aa6.48□□□□□ -1.37
ATXN3-237ENST00000556274 TECPR2O15040 1411 aa6.48□□□□□ -1.37
ATXN3-237ENST00000556274 DCCP43146 1447 aa6.48□□□□□ -1.37
ATXN3-237ENST00000556274 KIF1AQ12756 1690 aa6.48□□□□□ -1.37
ATXN3-237ENST00000556274 CDC42BPGQ6DT37 1551 aa6.48□□□□□ -1.37
ATXN3-237ENST00000556274 NPHP3Q7Z494 1330 aa6.48□□□□□ -1.37
ATXN3-237ENST00000556274 EVC2Q86UK5 1308 aa6.48□□□□□ -1.37
ATXN3-237ENST00000556274 MARF1Q9Y4F3 1742 aaKnown RBP6.47□□□□□ -1.37
ATXN3-237ENST00000556274 COL16A1Q07092 1604 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-237ENST00000556274 USP32Q8NFA0 1604 aa6.47□□□□□ -1.37
ATXN3-237ENST00000556274 EIF3AQ14152 1382 aaKnown RBP6.47□□□□□ -1.37
ATXN3-237ENST00000556274 GPRASP1Q5JY77 1395 aa6.47□□□□□ -1.37
ATXN3-237ENST00000556274 JCADQ9P266 1359 aa6.47□□□□□ -1.37
ATXN3-237ENST00000556274 SHPRHQ149N8 1683 aa6.47□□□□□ -1.37
ATXN3-237ENST00000556274 ST20-MTHFSA0A0A6YYL1 179 aa6.47□□□□□ -1.37
ATXN3-237ENST00000556274 TNFRSF10BO14763 440 aa6.47□□□□□ -1.37
ATXN3-237ENST00000556274 EFSO43281 561 aa6.47□□□□□ -1.37
ATXN3-237ENST00000556274 BMP4P12644 408 aa6.47□□□□□ -1.37
ATXN3-237ENST00000556274 CD33P20138 364 aa6.47□□□□□ -1.37
ATXN3-237ENST00000556274 IDH3AP50213 366 aa6.47□□□□□ -1.37
ATXN3-237ENST00000556274 TYRO3Q06418 890 aa6.47□□□□□ -1.37
ATXN3-237ENST00000556274 SFSWAPQ12872 951 aaKnown RBP6.47□□□□□ -1.37
ATXN3-237ENST00000556274 LAMC2Q13753 1193 aa6.47□□□□□ -1.37
ATXN3-237ENST00000556274 TREML1Q86YW5 311 aa6.47□□□□□ -1.37
ATXN3-237ENST00000556274 HELQQ8TDG4 1101 aa6.47□□□□□ -1.37
ATXN3-237ENST00000556274 C8orf37Q96NL8 207 aa6.47□□□□□ -1.37
ATXN3-237ENST00000556274 DMGDHQ9UI17 866 aaKnown RBP6.47□□□□□ -1.37
ATXN3-237ENST00000556274 KCNH4Q9UQ05 1017 aa6.47□□□□□ -1.37
ATXN3-237ENST00000556274 MED1Q15648 1581 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms