RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 FILIP1Q7Z7B0 1213 aa5.2□□□□□ -1.58
KTN1-220ENST00000555172 DMRTC2Q8IXT2 367 aaPredicted RBP5.2□□□□□ -1.58
KTN1-220ENST00000555172 PCDH12Q9NPG4 1184 aa5.2□□□□□ -1.58
KTN1-220ENST00000555172 IFT57Q9NWB7 429 aa5.2□□□□□ -1.58
KTN1-220ENST00000555172 LRFN2Q9ULH4 789 aa5.2□□□□□ -1.58
KTN1-220ENST00000555172 FZD6O60353 706 aa5.2□□□□□ -1.58
KTN1-220ENST00000555172 PPFIA4O75335 1185 aa5.2□□□□□ -1.58
KTN1-220ENST00000555172 PCSK2P16519 638 aa5.2□□□□□ -1.58
KTN1-220ENST00000555172 USP5P45974 858 aa5.2□□□□□ -1.58
KTN1-220ENST00000555172 RNF34Q969K3 372 aa5.2□□□□□ -1.58
KTN1-220ENST00000555172 HSH2DQ96JZ2 352 aa5.2□□□□□ -1.58
KTN1-220ENST00000555172 SETDB2Q96T68 719 aa5.2□□□□□ -1.58
KTN1-220ENST00000555172 IRF2BPLQ9H1B7 796 aa5.2□□□□□ -1.58
KTN1-220ENST00000555172 NEUROD4Q9HD90 331 aa5.2□□□□□ -1.58
KTN1-220ENST00000555172 JPH1Q9HDC5 661 aaPredicted RBP5.2□□□□□ -1.58
KTN1-220ENST00000555172 CCDC87Q9NVE4 849 aa5.2□□□□□ -1.58
KTN1-220ENST00000555172 NLRP2Q9NX02 1062 aa5.2□□□□□ -1.58
KTN1-220ENST00000555172 PARP2Q9UGN5 583 aa5.2□□□□□ -1.58
KTN1-220ENST00000555172 PCDHGB7Q9Y5F8 929 aa5.2□□□□□ -1.58
KTN1-220ENST00000555172 TREHO43280 583 aa5.19□□□□□ -1.58
KTN1-220ENST00000555172 CREB3O43889 395 aa5.19□□□□□ -1.58
KTN1-220ENST00000555172 RBL2Q08999 1139 aa5.19□□□□□ -1.58
KTN1-220ENST00000555172 DGKZQ13574 1117 aa5.19□□□□□ -1.58
KTN1-220ENST00000555172 RALBP1Q15311 655 aa5.19□□□□□ -1.58
KTN1-220ENST00000555172 ZNF394Q53GI3 561 aa5.19□□□□□ -1.58
KTN1-220ENST00000555172 HSP90AB2PQ58FF8 381 aa5.19□□□□□ -1.58
KTN1-220ENST00000555172 C1orf53Q5VUE5 145 aa5.19□□□□□ -1.58
KTN1-220ENST00000555172 CCDC146Q8IYE0 955 aa5.19□□□□□ -1.58
KTN1-220ENST00000555172 TTC16Q8NEE8 873 aa5.19□□□□□ -1.58
KTN1-220ENST00000555172 BHMTQ93088 406 aa5.19□□□□□ -1.58
KTN1-220ENST00000555172 GMLQ99445 158 aa5.19□□□□□ -1.58
KTN1-220ENST00000555172 PHACTR1Q9C0D0 580 aa5.19□□□□□ -1.58
KTN1-220ENST00000555172 PAX3P23760 479 aa5.18□□□□□ -1.58
KTN1-220ENST00000555172 SSTR4P31391 388 aa5.18□□□□□ -1.58
KTN1-220ENST00000555172 IREB2P48200 963 aaKnown RBP5.18□□□□□ -1.58
KTN1-220ENST00000555172 ATP2B2Q01814 1243 aa5.18□□□□□ -1.58
KTN1-220ENST00000555172 HIF1AQ16665 826 aa5.18□□□□□ -1.58
KTN1-220ENST00000555172 ARMC5Q96C12 935 aa5.18□□□□□ -1.58
KTN1-220ENST00000555172 IFT43Q96FT9 208 aa5.18□□□□□ -1.58
KTN1-220ENST00000555172 DUSP9Q99956 384 aaKnown RBP5.18□□□□□ -1.58
KTN1-220ENST00000555172 MRS2Q9HD23 443 aa5.18□□□□□ -1.58
KTN1-220ENST00000555172 BRD7Q9NPI1 651 aa5.18□□□□□ -1.58
KTN1-220ENST00000555172 RNF112Q9ULX5 631 aa5.18□□□□□ -1.58
KTN1-220ENST00000555172 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.18□□□□□ -1.58
KTN1-220ENST00000555172 LAS1LQ9Y4W2 734 aaKnown RBP5.18□□□□□ -1.58
KTN1-220ENST00000555172 ZBTB39O15060 712 aa5.18□□□□□ -1.58
KTN1-220ENST00000555172 MZF1P28698 734 aaPredicted RBP5.18□□□□□ -1.58
KTN1-220ENST00000555172 ZNF76P36508 570 aa5.18□□□□□ -1.58
KTN1-220ENST00000555172 MAPK8P45983 427 aa5.18□□□□□ -1.58
KTN1-220ENST00000555172 XPCQ01831 940 aaPredicted RBP5.18□□□□□ -1.58
KTN1-220ENST00000555172 DNM1Q05193 864 aaKnown RBP5.18□□□□□ -1.58
KTN1-220ENST00000555172 FMR1Q06787 632 aaKnown RBP eCLIP5.18□□□□□ -1.58
KTN1-220ENST00000555172 ZNF280CQ8ND82 737 aa5.18□□□□□ -1.58
KTN1-220ENST00000555172 CEP63Q96MT8 703 aa5.18□□□□□ -1.58
KTN1-220ENST00000555172 FAM13BQ9NYF5 915 aa5.18□□□□□ -1.58
KTN1-220ENST00000555172 KLK14Q9P0G3 267 aa5.18□□□□□ -1.58
KTN1-220ENST00000555172 VTI1BQ9UEU0 232 aa5.18□□□□□ -1.58
KTN1-220ENST00000555172 POLIQ9UNA4 740 aa5.18□□□□□ -1.58
KTN1-220ENST00000555172 LDHBP07195 334 aaKnown RBP5.17□□□□□ -1.58
KTN1-220ENST00000555172 HSD3B2P26439 372 aa5.17□□□□□ -1.58
KTN1-220ENST00000555172 ZAP70P43403 619 aa5.17□□□□□ -1.58
KTN1-220ENST00000555172 AFF1P51825 1210 aaKnown RBP5.17□□□□□ -1.58
KTN1-220ENST00000555172 RAC1P63000 192 aa5.17□□□□□ -1.58
KTN1-220ENST00000555172 EHHADHQ08426 723 aa5.17□□□□□ -1.58
KTN1-220ENST00000555172 RNF187Q5TA31 235 aaPredicted RBP5.17□□□□□ -1.58
KTN1-220ENST00000555172 ATCAYQ86WG3 371 aa5.17□□□□□ -1.58
KTN1-220ENST00000555172 MCF2L2Q86YR7 1114 aa5.17□□□□□ -1.58
KTN1-220ENST00000555172 SMC5Q8IY18 1101 aa5.17□□□□□ -1.58
KTN1-220ENST00000555172 FMR1NBQ8N0W7 255 aaPredicted RBP5.17□□□□□ -1.58
KTN1-220ENST00000555172 WFDC12Q8WWY7 111 aa5.17□□□□□ -1.58
KTN1-220ENST00000555172 FAM129BQ96TA1 746 aa5.17□□□□□ -1.58
KTN1-220ENST00000555172 UBE2OQ9C0C9 1292 aaKnown RBP5.17□□□□□ -1.58
KTN1-220ENST00000555172 PCMTD2Q9NV79 361 aa5.17□□□□□ -1.58
KTN1-220ENST00000555172 TERF2IPQ9NYB0 399 aa5.17□□□□□ -1.58
KTN1-220ENST00000555172 MAGEC2Q9UBF1 373 aaPredicted RBP5.17□□□□□ -1.58
KTN1-220ENST00000555172 WWC3Q9ULE0 1092 aa5.17□□□□□ -1.58
KTN1-220ENST00000555172 INPP5FQ9Y2H2 1132 aa5.17□□□□□ -1.58
KTN1-220ENST00000555172 PRPF40AO75400 957 aaKnown RBP5.16□□□□□ -1.58
KTN1-220ENST00000555172 NOS3P29474 1203 aa5.16□□□□□ -1.58
KTN1-220ENST00000555172 TBX4P57082 545 aa5.16□□□□□ -1.58
KTN1-220ENST00000555172 DSC3Q14574 896 aa5.16□□□□□ -1.58
KTN1-220ENST00000555172 FMNL3Q8IVF7 1028 aa5.16□□□□□ -1.58
KTN1-220ENST00000555172 ETFBKMTQ8IXQ9 262 aa5.16□□□□□ -1.58
KTN1-220ENST00000555172 EDEM1Q92611 657 aa5.16□□□□□ -1.58
KTN1-220ENST00000555172 ALKBH8Q96BT7 664 aaKnown RBP5.16□□□□□ -1.58
KTN1-220ENST00000555172 NAGPAQ9UK23 515 aa5.16□□□□□ -1.58
KTN1-220ENST00000555172 SLC6A14Q9UN76 642 aa5.16□□□□□ -1.58
KTN1-220ENST00000555172 SORBS3O60504 671 aa5.16□□□□□ -1.58
KTN1-220ENST00000555172 S100BP04271 92 aaPredicted RBP5.16□□□□□ -1.58
KTN1-220ENST00000555172 RPLP1P05386 114 aaKnown RBP5.16□□□□□ -1.58
KTN1-220ENST00000555172 RACK1P63244 317 aaKnown RBP5.16□□□□□ -1.58
KTN1-220ENST00000555172 ARID5AQ03989 594 aa5.16□□□□□ -1.58
KTN1-220ENST00000555172 GNL2Q13823 731 aaKnown RBP5.16□□□□□ -1.58
KTN1-220ENST00000555172 PSAPL1Q6NUJ1 521 aa5.16□□□□□ -1.58
KTN1-220ENST00000555172 TREML1Q86YW5 311 aa5.16□□□□□ -1.58
KTN1-220ENST00000555172 ZCRB1Q8TBF4 217 aaKnown RBP5.16□□□□□ -1.58
KTN1-220ENST00000555172 RHPN1Q8TCX5 695 aa5.16□□□□□ -1.58
KTN1-220ENST00000555172 MEGF10Q96KG7 1140 aa5.16□□□□□ -1.58
KTN1-220ENST00000555172 DDX56Q9NY93 547 aaKnown RBP5.16□□□□□ -1.58
KTN1-220ENST00000555172 MAFGO15525 162 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms