RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 GOLGA6L19H0YKK7 550 aa18.36■□□□□ 0.53
ARHGEF40-203ENST00000554514 GPAA1O43292 621 aa18.36■□□□□ 0.53
ARHGEF40-203ENST00000554514 ZNF75DP51815 510 aa18.36■□□□□ 0.53
ARHGEF40-203ENST00000554514 CTNNA3Q9UI47 895 aa18.36■□□□□ 0.53
ARHGEF40-203ENST00000554514 RCOR1Q9UKL0 485 aa18.36■□□□□ 0.53
ARHGEF40-203ENST00000554514 IDH1O75874 414 aaKnown RBP18.36■□□□□ 0.53
ARHGEF40-203ENST00000554514 RXRAP19793 462 aa18.36■□□□□ 0.53
ARHGEF40-203ENST00000554514 LRRFIP1Q32MZ4 808 aaKnown RBP18.36■□□□□ 0.53
ARHGEF40-203ENST00000554514 CPLX1O14810 134 aa18.35■□□□□ 0.53
ARHGEF40-203ENST00000554514 PCCAP05165 728 aaPredicted RBP18.35■□□□□ 0.53
ARHGEF40-203ENST00000554514 MCAMP43121 646 aa18.35■□□□□ 0.53
ARHGEF40-203ENST00000554514 ZBTB38Q8NAP3 1195 aaPredicted RBP18.35■□□□□ 0.53
ARHGEF40-203ENST00000554514 MYRIPQ8NFW9 859 aa18.35■□□□□ 0.53
ARHGEF40-203ENST00000554514 A0A1B0GVL5 298 aa18.35■□□□□ 0.53
ARHGEF40-203ENST00000554514 ZNF213O14771 459 aa18.35■□□□□ 0.53
ARHGEF40-203ENST00000554514 SF3A1Q15459 793 aaKnown RBP18.35■□□□□ 0.53
ARHGEF40-203ENST00000554514 HELBQ8NG08 1087 aaPredicted RBP18.35■□□□□ 0.53
ARHGEF40-203ENST00000554514 APPBP2Q92624 585 aa18.35■□□□□ 0.53
ARHGEF40-203ENST00000554514 C8orf76Q96K31 380 aa18.35■□□□□ 0.53
ARHGEF40-203ENST00000554514 SPTLC3Q9NUV7 552 aa18.35■□□□□ 0.53
ARHGEF40-203ENST00000554514 CLIP2Q9UDT6 1046 aa18.35■□□□□ 0.53
ARHGEF40-203ENST00000554514 SALL1Q9NSC2 1324 aa18.35■□□□□ 0.53
ARHGEF40-203ENST00000554514 STARD3NLO95772 234 aa18.34■□□□□ 0.53
ARHGEF40-203ENST00000554514 VSIG10Q8N0Z9 540 aa18.34■□□□□ 0.53
ARHGEF40-203ENST00000554514 TDRD7Q8NHU6 1098 aaKnown RBP18.34■□□□□ 0.53
ARHGEF40-203ENST00000554514 ZMYND15Q9H091 742 aa18.34■□□□□ 0.53
ARHGEF40-203ENST00000554514 ORC3Q9UBD5 711 aaPredicted RBP18.34■□□□□ 0.53
ARHGEF40-203ENST00000554514 SLC9C2Q5TAH2 1124 aa18.34■□□□□ 0.53
ARHGEF40-203ENST00000554514 A0A0U1RQG5 324 aaPredicted RBP18.33■□□□□ 0.53
ARHGEF40-203ENST00000554514 BECN2A8MW95 431 aa18.33■□□□□ 0.53
ARHGEF40-203ENST00000554514 TPM3P06753 285 aa18.33■□□□□ 0.53
ARHGEF40-203ENST00000554514 SNW1Q13573 536 aaKnown RBP18.33■□□□□ 0.53
ARHGEF40-203ENST00000554514 CCDC144CPQ8IYA2 1237 aa18.33■□□□□ 0.53
ARHGEF40-203ENST00000554514 TRMT112Q9UI30 125 aaKnown RBP18.33■□□□□ 0.53
ARHGEF40-203ENST00000554514 CLIC4Q9Y696 253 aa18.33■□□□□ 0.53
ARHGEF40-203ENST00000554514 UBR2Q8IWV8 1755 aa18.33■□□□□ 0.53
ARHGEF40-203ENST00000554514 ZFYP08048 801 aaPredicted RBP18.33■□□□□ 0.52
ARHGEF40-203ENST00000554514 ANTXR2P58335 489 aa18.33■□□□□ 0.52
ARHGEF40-203ENST00000554514 STK38Q15208 465 aa18.33■□□□□ 0.52
ARHGEF40-203ENST00000554514 NCOA7Q8NI08 942 aa18.33■□□□□ 0.52
ARHGEF40-203ENST00000554514 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.33■□□□□ 0.52
ARHGEF40-203ENST00000554514 PCDHA7Q9UN72 937 aa18.33■□□□□ 0.52
ARHGEF40-203ENST00000554514 TBC1D2BQ9UPU7 963 aa18.33■□□□□ 0.52
ARHGEF40-203ENST00000554514 PLA2G4DQ86XP0 818 aa18.33■□□□□ 0.52
ARHGEF40-203ENST00000554514 PLEKHG2Q9H7P9 1386 aa18.32■□□□□ 0.52
ARHGEF40-203ENST00000554514 STX1AQ16623 288 aa18.32■□□□□ 0.52
ARHGEF40-203ENST00000554514 TTLL11Q8NHH1 800 aa18.32■□□□□ 0.52
ARHGEF40-203ENST00000554514 NKX2-3Q8TAU0 364 aa18.32■□□□□ 0.52
ARHGEF40-203ENST00000554514 SDF4Q9BRK5 362 aa18.32■□□□□ 0.52
ARHGEF40-203ENST00000554514 BCL11BQ9C0K0 894 aaPredicted RBP18.32■□□□□ 0.52
ARHGEF40-203ENST00000554514 BTG4Q9NY30 223 aa18.32■□□□□ 0.52
ARHGEF40-203ENST00000554514 MAP3K15Q6ZN16 1313 aa18.32■□□□□ 0.52
ARHGEF40-203ENST00000554514 IRS4O14654 1257 aaPredicted RBP18.32■□□□□ 0.52
ARHGEF40-203ENST00000554514 FAM160A1Q05DH4 1040 aa18.32■□□□□ 0.52
ARHGEF40-203ENST00000554514 NLRP10Q86W26 655 aa18.32■□□□□ 0.52
ARHGEF40-203ENST00000554514 MB21D2Q8IYB1 491 aaPredicted RBP18.32■□□□□ 0.52
ARHGEF40-203ENST00000554514 KLHL34Q8N239 644 aa18.32■□□□□ 0.52
ARHGEF40-203ENST00000554514 SOS2Q07890 1332 aaPredicted RBP18.31■□□□□ 0.52
ARHGEF40-203ENST00000554514 ZNF335Q9H4Z2 1342 aaPredicted RBP18.31■□□□□ 0.52
ARHGEF40-203ENST00000554514 ANKRD18BA2A2Z9 1011 aa18.31■□□□□ 0.52
ARHGEF40-203ENST00000554514 CSF1RP07333 972 aa18.31■□□□□ 0.52
ARHGEF40-203ENST00000554514 CCDC144BQ3MJ40 725 aa18.31■□□□□ 0.52
ARHGEF40-203ENST00000554514 GIGYF2Q6Y7W6 1299 aaKnown RBP18.31■□□□□ 0.52
ARHGEF40-203ENST00000554514 PRIMPOLQ96LW4 560 aa18.31■□□□□ 0.52
ARHGEF40-203ENST00000554514 C16orf45Q96MC5 204 aaPredicted RBP18.31■□□□□ 0.52
ARHGEF40-203ENST00000554514 AIFM3Q96NN9 605 aa18.31■□□□□ 0.52
ARHGEF40-203ENST00000554514 HPS5Q9UPZ3 1129 aa18.31■□□□□ 0.52
ARHGEF40-203ENST00000554514 TNS2Q63HR2 1409 aa18.31■□□□□ 0.52
ARHGEF40-203ENST00000554514 SNAP23O00161 211 aa18.31■□□□□ 0.52
ARHGEF40-203ENST00000554514 PIH1D3Q9NQM4 214 aaKnown RBP18.31■□□□□ 0.52
ARHGEF40-203ENST00000554514 ZBTB1Q9Y2K1 713 aa18.31■□□□□ 0.52
ARHGEF40-203ENST00000554514 RIPOR2Q9Y4F9 1068 aa18.31■□□□□ 0.52
ARHGEF40-203ENST00000554514 ARID5BQ14865 1188 aa18.3■□□□□ 0.52
ARHGEF40-203ENST00000554514 ZSCAN25Q6NSZ9 544 aa18.3■□□□□ 0.52
ARHGEF40-203ENST00000554514 STK11IPQ8N1F8 1099 aa18.3■□□□□ 0.52
ARHGEF40-203ENST00000554514 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.3■□□□□ 0.52
ARHGEF40-203ENST00000554514 INCENPQ9NQS7 918 aa18.3■□□□□ 0.52
ARHGEF40-203ENST00000554514 PHKA1P46020 1223 aa18.3■□□□□ 0.52
ARHGEF40-203ENST00000554514 NDUFA8P51970 172 aa18.3■□□□□ 0.52
ARHGEF40-203ENST00000554514 CTSWP56202 376 aa18.3■□□□□ 0.52
ARHGEF40-203ENST00000554514 TRDNQ13061 729 aa18.3■□□□□ 0.52
ARHGEF40-203ENST00000554514 CHAF1AQ13111 956 aaPredicted RBP18.3■□□□□ 0.52
ARHGEF40-203ENST00000554514 IQCB1Q15051 598 aa18.3■□□□□ 0.52
ARHGEF40-203ENST00000554514 MRPS27Q92552 414 aaKnown RBP18.3■□□□□ 0.52
ARHGEF40-203ENST00000554514 RIC1Q4ADV7 1423 aa18.3■□□□□ 0.52
ARHGEF40-203ENST00000554514 KIF28PB7ZC32 967 aa18.29■□□□□ 0.52
ARHGEF40-203ENST00000554514 BIN1O00499 593 aa18.29■□□□□ 0.52
ARHGEF40-203ENST00000554514 TRIM28Q13263 835 aaKnown RBP18.29■□□□□ 0.52
ARHGEF40-203ENST00000554514 FILIP1Q7Z7B0 1213 aa18.29■□□□□ 0.52
ARHGEF40-203ENST00000554514 TBC1D10CQ8IV04 446 aa18.29■□□□□ 0.52
ARHGEF40-203ENST00000554514 AOPEPQ8N6M6 819 aa18.29■□□□□ 0.52
ARHGEF40-203ENST00000554514 CTAGE5O15320 804 aa18.29■□□□□ 0.52
ARHGEF40-203ENST00000554514 ENGASEQ8NFI3 743 aa18.29■□□□□ 0.52
ARHGEF40-203ENST00000554514 CACTINQ8WUQ7 758 aaKnown RBP18.29■□□□□ 0.52
ARHGEF40-203ENST00000554514 SLC4A9Q96Q91 983 aa18.29■□□□□ 0.52
ARHGEF40-203ENST00000554514 NWD2Q9ULI1 1742 aa18.28■□□□□ 0.52
ARHGEF40-203ENST00000554514 B4E1Z4 1266 aa18.28■□□□□ 0.52
ARHGEF40-203ENST00000554514 DHX16O60231 1041 aaKnown RBP18.28■□□□□ 0.52
ARHGEF40-203ENST00000554514 MICU3Q86XE3 530 aa18.28■□□□□ 0.52
ARHGEF40-203ENST00000554514 MYL10Q9BUA6 226 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms