RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 MYO1CO00159 1063 aa4.55□□□□□ -1.68
LRFN5-204ENST00000554171 RNF113AO15541 343 aaKnown RBP4.55□□□□□ -1.68
LRFN5-204ENST00000554171 AP1G2O75843 785 aa4.55□□□□□ -1.68
LRFN5-204ENST00000554171 SASH1O94885 1247 aa4.55□□□□□ -1.68
LRFN5-204ENST00000554171 APBB3O95704 486 aa4.55□□□□□ -1.68
LRFN5-204ENST00000554171 PDGFRBP09619 1106 aa4.55□□□□□ -1.68
LRFN5-204ENST00000554171 ALAS1P13196 640 aa4.55□□□□□ -1.68
LRFN5-204ENST00000554171 DDIT3P35638 169 aa4.55□□□□□ -1.68
LRFN5-204ENST00000554171 IGBP1P78318 339 aa4.55□□□□□ -1.68
LRFN5-204ENST00000554171 SYCP1Q15431 976 aa4.55□□□□□ -1.68
LRFN5-204ENST00000554171 BCL2A1Q16548 175 aa4.55□□□□□ -1.68
LRFN5-204ENST00000554171 SPATA21Q7Z572 469 aa4.55□□□□□ -1.68
LRFN5-204ENST00000554171 USP48Q86UV5 1035 aa4.55□□□□□ -1.68
LRFN5-204ENST00000554171 SDCCAG3Q96C92 435 aa4.55□□□□□ -1.68
LRFN5-204ENST00000554171 TMX4Q9H1E5 349 aaPredicted RBP4.55□□□□□ -1.68
LRFN5-204ENST00000554171 EPS15L1Q9UBC2 864 aa4.55□□□□□ -1.68
LRFN5-204ENST00000554171 NCAM1P13591 858 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 RAC2P15153 192 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 MPP3Q13368 585 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 TLDC1Q6P9B6 456 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 METTL16Q86W50 562 aaKnown RBP4.54□□□□□ -1.68
LRFN5-204ENST00000554171 CHPFQ8IZ52 775 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 LSMEM2Q8N112 164 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 NLRP3Q96P20 1036 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 TFIP11Q9UBB9 837 aaKnown RBP4.54□□□□□ -1.68
LRFN5-204ENST00000554171 STAP2Q9UGK3 403 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 COL4A3BPQ9Y5P4 624 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 ENPP3O14638 875 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 CAP2P40123 477 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 PAPOLAP51003 745 aaKnown RBP4.54□□□□□ -1.68
LRFN5-204ENST00000554171 COPAP53621 1224 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 SFSWAPQ12872 951 aaKnown RBP4.54□□□□□ -1.68
LRFN5-204ENST00000554171 AADATQ8N5Z0 425 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 STON2Q8WXE9 905 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 HPS3Q969F9 1004 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 SH3GL3Q99963 347 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 AGO2Q9UKV8 859 aaKnown RBP4.54□□□□□ -1.68
LRFN5-204ENST00000554171 CCDC144AA2RUR9 1427 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 AATKQ6ZMQ8 1374 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 hCG_2014768A0A024R1R8 64 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 ZBED4O75132 1171 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 RCAN1P53805 252 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 PDE4DQ08499 809 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 SNX1Q13596 522 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 PABPC1LQ4VXU2 614 aaKnown RBP4.54□□□□□ -1.68
LRFN5-204ENST00000554171 CC2D1AQ6P1N0 951 aaPredicted RBP4.54□□□□□ -1.68
LRFN5-204ENST00000554171 HSCBQ8IWL3 235 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 TMC2Q8TDI7 906 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 PHACTR1Q9C0D0 580 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 POLMQ9NP87 494 aaPredicted RBP4.54□□□□□ -1.68
LRFN5-204ENST00000554171 DDX21Q9NR30 783 aaKnown RBP eCLIP4.54□□□□□ -1.68
LRFN5-204ENST00000554171 PCSK1NQ9UHG2 260 aa4.54□□□□□ -1.68
LRFN5-204ENST00000554171 POLR1AO95602 1720 aaPredicted RBP4.53□□□□□ -1.68
LRFN5-204ENST00000554171 SOGA1O94964 1423 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 KIF21AQ7Z4S6 1674 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 AKR1B10O60218 316 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 SNUPNO95149 360 aaKnown RBP4.53□□□□□ -1.68
LRFN5-204ENST00000554171 UBA7P41226 1012 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 POLD2P49005 469 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 UBASH3AP57075 661 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 KRT83P78385 493 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 GPR162Q16538 588 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 TRIM71Q2Q1W2 868 aaKnown RBP4.53□□□□□ -1.68
LRFN5-204ENST00000554171 ZNF362Q5T0B9 420 aaPredicted RBP4.53□□□□□ -1.68
LRFN5-204ENST00000554171 MSL1Q68DK7 614 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 CCDC129Q6ZRS4 1044 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 NEK10Q6ZWH5 1172 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 SRLQ86TD4 932 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 GAS2L3Q86XJ1 694 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 ARL10Q8N8L6 244 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 DHX38Q92620 1227 aaKnown RBP4.53□□□□□ -1.68
LRFN5-204ENST00000554171 RBM18Q96H35 190 aaKnown RBP4.53□□□□□ -1.68
LRFN5-204ENST00000554171 UPF2Q9HAU5 1272 aaKnown RBP4.53□□□□□ -1.68
LRFN5-204ENST00000554171 HESX1Q9UBX0 185 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 SPDYE3A6NKU9 549 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 PRKAR2BP31323 418 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 PRPHP41219 470 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 ROR1Q01973 937 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 POLA2Q14181 598 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 NBPF8Q3BBV2 869 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 C10orf62Q5T681 223 aaPredicted RBP4.53□□□□□ -1.68
LRFN5-204ENST00000554171 CCDC68Q9H2F9 335 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 ZSCAN16Q9H4T2 348 aaPredicted RBP4.53□□□□□ -1.68
LRFN5-204ENST00000554171 TYW1Q9NV66 732 aaKnown RBP4.53□□□□□ -1.68
LRFN5-204ENST00000554171 ZNF219Q9P2Y4 722 aaPredicted RBP4.53□□□□□ -1.68
LRFN5-204ENST00000554171 TUBGCP4Q9UGJ1 667 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.53□□□□□ -1.68
LRFN5-204ENST00000554171 GPRASP1Q5JY77 1395 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 ENO4A6NNW6 628 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 CCP110O43303 1012 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 KCNJ13O60928 360 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 LDHAP00338 332 aaKnown RBP4.53□□□□□ -1.68
LRFN5-204ENST00000554171 SEPT2Q15019 361 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 HELQQ8TDG4 1101 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 MAML1Q92585 1016 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 XAGE2Q96GT9 111 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 TRPC6Q9Y210 931 aa4.53□□□□□ -1.68
LRFN5-204ENST00000554171 BAZ1AQ9NRL2 1556 aaPredicted RBP4.52□□□□□ -1.69
LRFN5-204ENST00000554171 CUX2O14529 1486 aa4.52□□□□□ -1.69
LRFN5-204ENST00000554171 TAGLNQ01995 201 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms