RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 RASGRF1Q13972 1273 aa17.17■□□□□ 0.34
SCN8A-207ENST00000551216 KLHL34Q8N239 644 aa17.17■□□□□ 0.34
SCN8A-207ENST00000551216 TMEM87AQ8NBN3 555 aa17.17■□□□□ 0.34
SCN8A-207ENST00000551216 HELBQ8NG08 1087 aaPredicted RBP17.17■□□□□ 0.34
SCN8A-207ENST00000551216 GTF3C6Q969F1 213 aa17.17■□□□□ 0.34
SCN8A-207ENST00000551216 ANKRD2Q9GZV1 360 aa17.17■□□□□ 0.34
SCN8A-207ENST00000551216 PUS7LQ9H0K6 701 aaKnown RBP17.17■□□□□ 0.34
SCN8A-207ENST00000551216 PIH1D3Q9NQM4 214 aaKnown RBP17.17■□□□□ 0.34
SCN8A-207ENST00000551216 TCRBV5S4A2TA0A5A2 114 aa17.16■□□□□ 0.34
SCN8A-207ENST00000551216 GOLGA6L3A6NEY3 463 aa17.16■□□□□ 0.34
SCN8A-207ENST00000551216 IDH1O75874 414 aaKnown RBP17.16■□□□□ 0.34
SCN8A-207ENST00000551216 FGAP02671 866 aa17.16■□□□□ 0.34
SCN8A-207ENST00000551216 GNAT2P19087 354 aa17.16■□□□□ 0.34
SCN8A-207ENST00000551216 CSPP1Q1MSJ5 1256 aa17.16■□□□□ 0.34
SCN8A-207ENST00000551216 PI16Q6UXB8 463 aa17.16■□□□□ 0.34
SCN8A-207ENST00000551216 Q6ZUG5 572 aa17.16■□□□□ 0.34
SCN8A-207ENST00000551216 STOX1Q6ZVD7 989 aa17.16■□□□□ 0.34
SCN8A-207ENST00000551216 ZNF274Q96GC6 653 aaPredicted RBP17.16■□□□□ 0.34
SCN8A-207ENST00000551216 UBR3Q6ZT12 1888 aa17.16■□□□□ 0.34
SCN8A-207ENST00000551216 MYO5AQ9Y4I1 1855 aaKnown RBP17.16■□□□□ 0.34
SCN8A-207ENST00000551216 FOXP2O15409 715 aa17.15■□□□□ 0.34
SCN8A-207ENST00000551216 F13A1P00488 732 aa17.15■□□□□ 0.34
SCN8A-207ENST00000551216 RPS8P62241 208 aaKnown RBP17.15■□□□□ 0.34
SCN8A-207ENST00000551216 ST3GAL1Q11201 340 aa17.15■□□□□ 0.34
SCN8A-207ENST00000551216 KIF3AQ9Y496 699 aa17.15■□□□□ 0.34
SCN8A-207ENST00000551216 ZNF532Q9HCE3 1301 aa17.15■□□□□ 0.34
SCN8A-207ENST00000551216 ZNF213O14771 459 aa17.14■□□□□ 0.33
SCN8A-207ENST00000551216 PFKFB2O60825 505 aa17.14■□□□□ 0.33
SCN8A-207ENST00000551216 KCNQ4P56696 695 aa17.14■□□□□ 0.33
SCN8A-207ENST00000551216 FGD1P98174 961 aa17.14■□□□□ 0.33
SCN8A-207ENST00000551216 CAVIN4Q5BKX8 364 aa17.14■□□□□ 0.33
SCN8A-207ENST00000551216 MINPP1Q9UNW1 487 aa17.14■□□□□ 0.33
SCN8A-207ENST00000551216 PNPLA7Q6ZV29 1317 aa17.14■□□□□ 0.33
SCN8A-207ENST00000551216 PRPF40AO75400 957 aaKnown RBP17.14■□□□□ 0.33
SCN8A-207ENST00000551216 SLFNL1Q499Z3 407 aa17.14■□□□□ 0.33
SCN8A-207ENST00000551216 NCOA7Q8NI08 942 aa17.14■□□□□ 0.33
SCN8A-207ENST00000551216 SRP68Q9UHB9 627 aaKnown RBP17.14■□□□□ 0.33
SCN8A-207ENST00000551216 NCLP19338 710 aaKnown RBP17.13■□□□□ 0.33
SCN8A-207ENST00000551216 MCM5P33992 734 aa17.13■□□□□ 0.33
SCN8A-207ENST00000551216 MRE11P49959 708 aa17.13■□□□□ 0.33
SCN8A-207ENST00000551216 HMGN5P82970 282 aaKnown RBP17.13■□□□□ 0.33
SCN8A-207ENST00000551216 BICDL1Q6ZP65 573 aa17.13■□□□□ 0.33
SCN8A-207ENST00000551216 KRT27Q7Z3Y8 459 aa17.13■□□□□ 0.33
SCN8A-207ENST00000551216 RGS22Q8NE09 1264 aa17.13■□□□□ 0.33
SCN8A-207ENST00000551216 AIDAQ96BJ3 306 aa17.13■□□□□ 0.33
SCN8A-207ENST00000551216 STRBPQ96SI9 672 aaKnown RBP17.13■□□□□ 0.33
SCN8A-207ENST00000551216 LARP6Q9BRS8 491 aaKnown RBP17.13■□□□□ 0.33
SCN8A-207ENST00000551216 DENND2AQ9ULE3 1009 aa17.13■□□□□ 0.33
SCN8A-207ENST00000551216 MTMR6Q9Y217 621 aa17.13■□□□□ 0.33
SCN8A-207ENST00000551216 PATL2C9JE40 543 aaKnown RBP17.12■□□□□ 0.33
SCN8A-207ENST00000551216 LARP1BQ659C4 914 aaKnown RBP17.12■□□□□ 0.33
SCN8A-207ENST00000551216 NECAB1Q8N987 351 aa17.12■□□□□ 0.33
SCN8A-207ENST00000551216 BRF1Q92994 677 aa17.12■□□□□ 0.33
SCN8A-207ENST00000551216 BRWD3Q6RI45 1802 aa17.12■□□□□ 0.33
SCN8A-207ENST00000551216 BCAMP50895 628 aa17.11■□□□□ 0.33
SCN8A-207ENST00000551216 ZNF445P59923 1031 aa17.11■□□□□ 0.33
SCN8A-207ENST00000551216 TRDNQ13061 729 aa17.11■□□□□ 0.33
SCN8A-207ENST00000551216 FAM182BQ5T319 152 aa17.11■□□□□ 0.33
SCN8A-207ENST00000551216 C3orf67Q6ZVT6 689 aa17.11■□□□□ 0.33
SCN8A-207ENST00000551216 RALYLQ86SE5 291 aaKnown RBP17.11■□□□□ 0.33
SCN8A-207ENST00000551216 SMARCC2Q8TAQ2 1214 aa17.11■□□□□ 0.33
SCN8A-207ENST00000551216 TCEANC2Q96MN5 208 aa17.11■□□□□ 0.33
SCN8A-207ENST00000551216 GZF1Q9H116 711 aaPredicted RBP17.11■□□□□ 0.33
SCN8A-207ENST00000551216 MB21D2Q8IYB1 491 aaPredicted RBP17.1■□□□□ 0.33
SCN8A-207ENST00000551216 SYAP1Q96A49 352 aaPredicted RBP17.1■□□□□ 0.33
SCN8A-207ENST00000551216 WWC3Q9ULE0 1092 aa17.1■□□□□ 0.33
SCN8A-207ENST00000551216 TCHHQ07283 1943 aa17.1■□□□□ 0.33
SCN8A-207ENST00000551216 DHX16O60231 1041 aaKnown RBP17.1■□□□□ 0.33
SCN8A-207ENST00000551216 COL9A3Q14050 684 aaPredicted RBP17.1■□□□□ 0.33
SCN8A-207ENST00000551216 TTLL5Q6EMB2 1281 aa17.1■□□□□ 0.33
SCN8A-207ENST00000551216 FBXO33Q7Z6M2 555 aa17.1■□□□□ 0.33
SCN8A-207ENST00000551216 MAGEB6Q8N7X4 407 aa17.1■□□□□ 0.33
SCN8A-207ENST00000551216 CELF1Q92879 486 aaKnown RBP17.1■□□□□ 0.33
SCN8A-207ENST00000551216 MTA3Q9BTC8 594 aa17.1■□□□□ 0.33
SCN8A-207ENST00000551216 NACAP1Q9BZK3 213 aa17.1■□□□□ 0.33
SCN8A-207ENST00000551216 COL4A1P02462 1669 aa17.09■□□□□ 0.33
SCN8A-207ENST00000551216 TAF1P21675 1872 aa17.09■□□□□ 0.33
SCN8A-207ENST00000551216 TM4SF1P30408 202 aa17.09■□□□□ 0.33
SCN8A-207ENST00000551216 LRRC4BQ9NT99 713 aa17.09■□□□□ 0.33
SCN8A-207ENST00000551216 LRP2BPQ9P2M1 347 aa17.09■□□□□ 0.33
SCN8A-207ENST00000551216 MYH13Q9UKX3 1938 aa17.09■□□□□ 0.33
SCN8A-207ENST00000551216 TIAM2Q8IVF5 1701 aa17.08■□□□□ 0.33
SCN8A-207ENST00000551216 CHD4Q14839 1912 aa17.08■□□□□ 0.33
SCN8A-207ENST00000551216 NFIXQ14938 502 aa17.08■□□□□ 0.32
SCN8A-207ENST00000551216 ZNF772Q68DY9 489 aaPredicted RBP17.08■□□□□ 0.32
SCN8A-207ENST00000551216 VPS37DQ86XT2 251 aa17.08■□□□□ 0.32
SCN8A-207ENST00000551216 CNBD1Q8NA66 436 aa17.08■□□□□ 0.32
SCN8A-207ENST00000551216 CNNM2Q9H8M5 875 aa17.08■□□□□ 0.32
SCN8A-207ENST00000551216 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.07■□□□□ 0.32
SCN8A-207ENST00000551216 SCRN1Q12765 414 aa17.07■□□□□ 0.32
SCN8A-207ENST00000551216 FOXD4L5Q5VV16 416 aaPredicted RBP17.07■□□□□ 0.32
SCN8A-207ENST00000551216 GPT2Q8TD30 523 aa17.07■□□□□ 0.32
SCN8A-207ENST00000551216 FOXD4L4Q8WXT5 416 aaPredicted RBP17.07■□□□□ 0.32
SCN8A-207ENST00000551216 TMEM87BQ96K49 555 aa17.07■□□□□ 0.32
SCN8A-207ENST00000551216 FAM84BQ96KN1 310 aaPredicted RBP17.07■□□□□ 0.32
SCN8A-207ENST00000551216 ZSCAN16Q9H4T2 348 aaPredicted RBP17.07■□□□□ 0.32
SCN8A-207ENST00000551216 NPHP1O15259 732 aa17.07■□□□□ 0.32
SCN8A-207ENST00000551216 PRC1O43663 620 aa17.07■□□□□ 0.32
SCN8A-207ENST00000551216 APPP05067 770 aa17.07■□□□□ 0.32
SCN8A-207ENST00000551216 PDIA3P30101 505 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms