RNA–Protein interactions for RNA: ENST00000550800.6

TMEM116-212, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 3

Gene TMEM116, Length 718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-212ENST00000550800 CCDC47Q96A33 483 aaKnown RBP5.95□□□□□ -1.46
TMEM116-212ENST00000550800 NAF1Q96HR8 494 aaKnown RBP5.95□□□□□ -1.46
TMEM116-212ENST00000550800 TCHPQ9BT92 498 aa5.95□□□□□ -1.46
TMEM116-212ENST00000550800 ZBED2Q9BTP6 218 aa5.95□□□□□ -1.46
TMEM116-212ENST00000550800 TUBB2BQ9BVA1 445 aa5.95□□□□□ -1.46
TMEM116-212ENST00000550800 RBSNQ9H1K0 784 aa5.95□□□□□ -1.46
TMEM116-212ENST00000550800 LAMC1P11047 1609 aa5.95□□□□□ -1.46
TMEM116-212ENST00000550800 GCC2Q8IWJ2 1684 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 MROH2BQ7Z745 1585 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 SPATA31E1Q6ZUB1 1445 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 ERICH2A1L162 156 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 GOLGA6L4A6NEF3 574 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 SRRM3A6NNA2 597 aaPredicted RBP5.94□□□□□ -1.46
TMEM116-212ENST00000550800 GOLGA8AA7E2F4 631 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 TIMM44O43615 452 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 CYTH3O43739 400 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 SH3BP5O60239 455 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 MARCH6O60337 910 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 RTN2O75298 545 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 BRD1O95696 1058 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 VIL1P09327 827 aaKnown RBP5.94□□□□□ -1.46
TMEM116-212ENST00000550800 COL9A1P20849 921 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 PAX3P23760 479 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 FNTAP49354 379 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 LSM11P83369 360 aaKnown RBP eCLIP5.94□□□□□ -1.46
TMEM116-212ENST00000550800 LAMB3Q13751 1172 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 SART3Q15020 963 aaKnown RBP5.94□□□□□ -1.46
TMEM116-212ENST00000550800 SESTD1Q86VW0 696 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 STK11IPQ8N1F8 1099 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 LRRC43Q8N309 656 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 RBM46Q8TBY0 533 aaKnown RBP5.94□□□□□ -1.46
TMEM116-212ENST00000550800 MICAL1Q8TDZ2 1067 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 USP33Q8TEY7 942 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 SPATA32Q96LK8 384 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 RSPH9Q9H1X1 276 aaPredicted RBP5.94□□□□□ -1.46
TMEM116-212ENST00000550800 RETREG1Q9H6L5 497 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 L2HGDHQ9H9P8 463 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 IL20Q9NYY1 176 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 SPATA7Q9P0W8 599 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 DDX25Q9UHL0 483 aaKnown RBP5.94□□□□□ -1.46
TMEM116-212ENST00000550800 RABGEF1Q9UJ41 708 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 TMED5Q9Y3A6 229 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 FHOD1Q9Y613 1164 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 IKBKGQ9Y6K9 419 aa5.94□□□□□ -1.46
TMEM116-212ENST00000550800 ANKRD30BQ9BXX2 1392 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 ABCC8Q09428 1581 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 CASZ1Q86V15 1759 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 TARSL2A2RTX5 802 aaKnown RBP5.93□□□□□ -1.46
TMEM116-212ENST00000550800 CCDC151A5D8V7 595 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 EFCAB8A8MWE9 144 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 EBAG9O00559 213 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 TRIM66O15016 1216 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 BIRC5O15392 142 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 SRGAP3O43295 1099 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 KIAA0754O94854 1291 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 FSBPO95073 299 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 TROVE2P10155 538 aaKnown RBP eCLIP5.93□□□□□ -1.46
TMEM116-212ENST00000550800 NAT1P18440 290 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 PSEN2P49810 448 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 RAB27AP51159 221 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 FOXD4Q12950 439 aaPredicted RBP5.93□□□□□ -1.46
TMEM116-212ENST00000550800 SEPT6Q14141 434 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 BRD3Q15059 726 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 CLPPQ16740 277 aaPredicted RBP5.93□□□□□ -1.46
TMEM116-212ENST00000550800 CEP85LQ5SZL2 805 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 C16orf87Q6PH81 154 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 FBXO38Q6PIJ6 1188 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 CLEC4GQ6UXB4 293 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 ARHGAP22Q7Z5H3 698 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 IQCA1Q86XH1 822 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 PEX5LQ8IYB4 626 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 GPR161Q8N6U8 529 aaKnown RBP5.93□□□□□ -1.46
TMEM116-212ENST00000550800 SMYD1Q8NB12 490 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 ATP11CQ8NB49 1132 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 VPS37AQ8NEZ2 397 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 FAM71BQ8TC56 605 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 HNRNPLLQ8WVV9 542 aaKnown RBP5.93□□□□□ -1.46
TMEM116-212ENST00000550800 EZH1Q92800 747 aaPredicted RBP5.93□□□□□ -1.46
TMEM116-212ENST00000550800 ZBTB10Q96DT7 871 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 MAML3Q96JK9 1138 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 FAM81BQ96LP2 452 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 ZMAT2Q96NC0 199 aaKnown RBP5.93□□□□□ -1.46
TMEM116-212ENST00000550800 SCLT1Q96NL6 688 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 CRBNQ96SW2 442 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 SH3GL1Q99961 368 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 LRRCC1Q9C099 1032 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 CENPHQ9H3R5 247 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 ARFGAP3Q9NP61 516 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 ZNHIT6Q9NWK9 470 aaKnown RBP5.93□□□□□ -1.46
TMEM116-212ENST00000550800 SLAIN2Q9P270 581 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 HDAC6Q9UBN7 1215 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 PAIP2BQ9ULR5 123 aaKnown RBP5.93□□□□□ -1.46
TMEM116-212ENST00000550800 ZNF148Q9UQR1 794 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 SSX2IPQ9Y2D8 614 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 TCOF1Q13428 1488 aaKnown RBP5.93□□□□□ -1.46
TMEM116-212ENST00000550800 SNAPC4Q5SXM2 1469 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 KDM5DQ9BY66 1539 aa5.93□□□□□ -1.46
TMEM116-212ENST00000550800 AQRO60306 1485 aaKnown RBP eCLIP5.92□□□□□ -1.468e-7■■■■■ 28.7
TMEM116-212ENST00000550800 NKTRP30414 1462 aaKnown RBP5.92□□□□□ -1.46
TMEM116-212ENST00000550800 PLB1Q6P1J6 1458 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms