RNA–Protein interactions for RNA: ENST00000550136.1

PTCH1-220, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 2,388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-220ENST00000550136 GPRASP1Q5JY77 1395 aa10.82□□□□□ -0.68
PTCH1-220ENST00000550136 H7C1W4 665 aa10.81□□□□□ -0.68
PTCH1-220ENST00000550136 PLSCR1O15162 318 aa10.81□□□□□ -0.68
PTCH1-220ENST00000550136 PYGBP11216 843 aa10.81□□□□□ -0.68
PTCH1-220ENST00000550136 ERCC6LQ2NKX8 1250 aa10.81□□□□□ -0.68
PTCH1-220ENST00000550136 NYAP1Q6ZVC0 841 aa10.81□□□□□ -0.68
PTCH1-220ENST00000550136 C17orf50Q8WW18 174 aa10.81□□□□□ -0.68
PTCH1-220ENST00000550136 TCP11Q8WWU5 503 aa10.81□□□□□ -0.68
PTCH1-220ENST00000550136 TBC1D5Q92609 795 aa10.81□□□□□ -0.68
PTCH1-220ENST00000550136 HOMER3Q9NSC5 361 aa10.81□□□□□ -0.68
PTCH1-220ENST00000550136 RIPOR2Q9Y4F9 1068 aa10.81□□□□□ -0.68
PTCH1-220ENST00000550136 CHUKO15111 745 aa10.81□□□□□ -0.68
PTCH1-220ENST00000550136 CASTP20810 708 aaKnown RBP10.81□□□□□ -0.68
PTCH1-220ENST00000550136 CCDC15Q0P6D6 951 aa10.81□□□□□ -0.68
PTCH1-220ENST00000550136 NEXNQ0ZGT2 675 aa10.81□□□□□ -0.68
PTCH1-220ENST00000550136 WLSQ5T9L3 541 aa10.81□□□□□ -0.68
PTCH1-220ENST00000550136 SPATA21Q7Z572 469 aa10.81□□□□□ -0.68
PTCH1-220ENST00000550136 FMNL2Q96PY5 1086 aa10.81□□□□□ -0.68
PTCH1-220ENST00000550136 YIPF2Q9BWQ6 316 aa10.81□□□□□ -0.68
PTCH1-220ENST00000550136 FHDC1Q9C0D6 1143 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-220ENST00000550136 SYNPO2Q9UMS6 1093 aa10.81□□□□□ -0.68
PTCH1-220ENST00000550136 FCHSD2O94868 740 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 FMNL1O95466 1100 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-220ENST00000550136 CDCA2Q69YH5 1023 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-220ENST00000550136 TRIM42Q8IWZ5 723 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 SPC24Q8NBT2 197 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 ZKSCAN4Q969J2 545 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-220ENST00000550136 MTA3Q9BTC8 594 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 UTP14AQ9BVJ6 771 aaKnown RBP10.8□□□□□ -0.68
PTCH1-220ENST00000550136 L2HGDHQ9H9P8 463 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 CWC25Q9NXE8 425 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-220ENST00000550136 BIN2Q9UBW5 565 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-220ENST00000550136 MAP3K5Q99683 1374 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 ANKRD30BQ9BXX2 1392 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 ANKRD65E5RJM6 399 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 PPFIA4O75335 1185 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 RTN3O95197 1032 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-220ENST00000550136 ZBTB7AO95365 584 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 TBC1D8O95759 1140 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 ARHGAP29Q52LW3 1261 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 TMEM132EQ6IEE7 984 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 IQCA1Q86XH1 822 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 TDRD7Q8NHU6 1098 aaKnown RBP10.8□□□□□ -0.68
PTCH1-220ENST00000550136 L3MBTL2Q969R5 705 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 ZBTB10Q96DT7 871 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 BICD1Q96G01 975 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 CABS1Q96KC9 395 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 AKAP2Q9Y2D5 859 aa10.8□□□□□ -0.68
PTCH1-220ENST00000550136 KIAA0232Q92628 1395 aa10.79□□□□□ -0.68
PTCH1-220ENST00000550136 ZNF521Q96K83 1311 aa10.79□□□□□ -0.68
PTCH1-220ENST00000550136 SMAPO00193 183 aa10.79□□□□□ -0.68
PTCH1-220ENST00000550136 HCLS1P14317 486 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-220ENST00000550136 TPP2P29144 1249 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-220ENST00000550136 PKP1Q13835 747 aa10.79□□□□□ -0.68
PTCH1-220ENST00000550136 PTPN14Q15678 1187 aa10.79□□□□□ -0.68
PTCH1-220ENST00000550136 HSP90B2PQ58FF3 399 aa10.79□□□□□ -0.68
PTCH1-220ENST00000550136 KIAA1328Q86T90 577 aa10.79□□□□□ -0.68
PTCH1-220ENST00000550136 RWDD1Q9H446 243 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-220ENST00000550136 PARP4Q9UKK3 1724 aaKnown RBP10.79□□□□□ -0.68
PTCH1-220ENST00000550136 SSH2Q76I76 1423 aa10.79□□□□□ -0.68
PTCH1-220ENST00000550136 SYNRGQ9UMZ2 1314 aa10.79□□□□□ -0.68
PTCH1-220ENST00000550136 FBXW10Q5XX13 1052 aa10.79□□□□□ -0.68
PTCH1-220ENST00000550136 TRMT2AQ8IZ69 625 aaKnown RBP10.79□□□□□ -0.68
PTCH1-220ENST00000550136 EZH1Q92800 747 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-220ENST00000550136 TSPYL2Q9H2G4 693 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-220ENST00000550136 STRN4Q9NRL3 753 aa10.79□□□□□ -0.68
PTCH1-220ENST00000550136 PEAK1Q9H792 1746 aa10.78□□□□□ -0.68
PTCH1-220ENST00000550136 PIK3C2GO75747 1445 aa10.78□□□□□ -0.68
PTCH1-220ENST00000550136 AP5Z1O43299 807 aa10.78□□□□□ -0.68
PTCH1-220ENST00000550136 SASH3O75995 380 aa10.78□□□□□ -0.68
PTCH1-220ENST00000550136 CLNS1AP54105 237 aaKnown RBP10.78□□□□□ -0.68
PTCH1-220ENST00000550136 SAAL1Q96ER3 474 aa10.78□□□□□ -0.68
PTCH1-220ENST00000550136 TMX3Q96JJ7 454 aa10.78□□□□□ -0.68
PTCH1-220ENST00000550136 ORC3Q9UBD5 711 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-220ENST00000550136 PHRF1Q9P1Y6 1649 aaKnown RBP10.77□□□□□ -0.68
PTCH1-220ENST00000550136 NPHP1O15259 732 aa10.77□□□□□ -0.68
PTCH1-220ENST00000550136 MYL1P05976 194 aa10.77□□□□□ -0.68
PTCH1-220ENST00000550136 ZSCAN25Q6NSZ9 544 aa10.77□□□□□ -0.68
PTCH1-220ENST00000550136 TCP11L2Q8N4U5 519 aa10.77□□□□□ -0.68
PTCH1-220ENST00000550136 HELBQ8NG08 1087 aaPredicted RBP10.77□□□□□ -0.68
PTCH1-220ENST00000550136 PDGFDQ9GZP0 370 aaPredicted RBP10.77□□□□□ -0.68
PTCH1-220ENST00000550136 THRAP3Q9Y2W1 955 aaKnown RBP10.77□□□□□ -0.68
PTCH1-220ENST00000550136 KDRP35968 1356 aa10.77□□□□□ -0.68
PTCH1-220ENST00000550136 OVOS2A0A0G2JMS6 1433 aa10.77□□□□□ -0.69
PTCH1-220ENST00000550136 OVOS2A0A0J9YW53 1432 aa10.77□□□□□ -0.69
PTCH1-220ENST00000550136 OVOS2Q6IE36 1432 aa10.77□□□□□ -0.69
PTCH1-220ENST00000550136 OGFOD1Q8N543 542 aa10.77□□□□□ -0.69
PTCH1-220ENST00000550136 PHC3Q8NDX5 983 aa10.77□□□□□ -0.69
PTCH1-220ENST00000550136 BICD2Q8TD16 824 aa10.77□□□□□ -0.69
PTCH1-220ENST00000550136 SGIP1Q9BQI5 828 aa10.77□□□□□ -0.69
PTCH1-220ENST00000550136 UBA5Q9GZZ9 404 aa10.77□□□□□ -0.69
PTCH1-220ENST00000550136 ZDHHC9Q9Y397 364 aa10.77□□□□□ -0.69
PTCH1-220ENST00000550136 ERC2O15083 957 aa10.76□□□□□ -0.69
PTCH1-220ENST00000550136 LIG3P49916 1009 aa10.76□□□□□ -0.69
PTCH1-220ENST00000550136 SLC8A3P57103 927 aa10.76□□□□□ -0.69
PTCH1-220ENST00000550136 RHBDL3P58872 404 aa10.76□□□□□ -0.69
PTCH1-220ENST00000550136 LRMPQ12912 555 aa10.76□□□□□ -0.69
PTCH1-220ENST00000550136 LAMB3Q13751 1172 aa10.76□□□□□ -0.69
PTCH1-220ENST00000550136 IQCB1Q15051 598 aa10.76□□□□□ -0.69
PTCH1-220ENST00000550136 FILIP1LQ4L180 1135 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms