RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 ZNF316A6NFI3 1004 aaPredicted RBP11.23□□□□□ -0.61
AC055716.1-201ENST00000550077 HOXB7P09629 217 aa11.23□□□□□ -0.61
AC055716.1-201ENST00000550077 MTFR1Q15390 333 aa11.23□□□□□ -0.61
AC055716.1-201ENST00000550077 SLC4A8Q2Y0W8 1093 aa11.23□□□□□ -0.61
AC055716.1-201ENST00000550077 FAM43AQ8N2R8 423 aa11.23□□□□□ -0.61
AC055716.1-201ENST00000550077 BRI3BPQ8WY22 251 aa11.23□□□□□ -0.61
AC055716.1-201ENST00000550077 OPTNQ96CV9 577 aa11.23□□□□□ -0.61
AC055716.1-201ENST00000550077 METTL22Q9BUU2 404 aaPredicted RBP11.23□□□□□ -0.61
AC055716.1-201ENST00000550077 MYO3BQ8WXR4 1341 aa11.23□□□□□ -0.61
AC055716.1-201ENST00000550077 ZNF804BA4D1E1 1349 aa11.22□□□□□ -0.61
AC055716.1-201ENST00000550077 SOX1O00570 391 aaPredicted RBP11.22□□□□□ -0.61
AC055716.1-201ENST00000550077 CTGFP29279 349 aa11.22□□□□□ -0.61
AC055716.1-201ENST00000550077 GOLGA2Q08379 1002 aa11.22□□□□□ -0.61
AC055716.1-201ENST00000550077 DLGAP5Q15398 846 aa11.22□□□□□ -0.61
AC055716.1-201ENST00000550077 CWF19L2Q2TBE0 894 aaKnown RBP11.22□□□□□ -0.61
AC055716.1-201ENST00000550077 CFAP100Q494V2 611 aa11.22□□□□□ -0.61
AC055716.1-201ENST00000550077 SLC9C1Q4G0N8 1177 aa11.22□□□□□ -0.61
AC055716.1-201ENST00000550077 C8orf58Q8NAV2 365 aa11.22□□□□□ -0.61
AC055716.1-201ENST00000550077 TRIOBPQ9H2D6 2365 aa11.22□□□□□ -0.61
AC055716.1-201ENST00000550077 CD209Q9NNX6 404 aa11.22□□□□□ -0.61
AC055716.1-201ENST00000550077 MAP3K2Q9Y2U5 619 aa11.22□□□□□ -0.61
AC055716.1-201ENST00000550077 COL1A1P02452 1464 aaPredicted RBP11.21□□□□□ -0.61
AC055716.1-201ENST00000550077 PPP1R12BO60237 982 aaPredicted RBP11.21□□□□□ -0.61
AC055716.1-201ENST00000550077 TAF5LO75529 589 aa11.21□□□□□ -0.61
AC055716.1-201ENST00000550077 ZNF853P0CG23 659 aa11.21□□□□□ -0.61
AC055716.1-201ENST00000550077 LMOD3Q0VAK6 560 aa11.21□□□□□ -0.61
AC055716.1-201ENST00000550077 RASA3Q14644 834 aa11.21□□□□□ -0.61
AC055716.1-201ENST00000550077 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.21□□□□□ -0.61
AC055716.1-201ENST00000550077 MTMR14Q8NCE2 650 aa11.21□□□□□ -0.61
AC055716.1-201ENST00000550077 SLC17A8Q8NDX2 589 aa11.21□□□□□ -0.61
AC055716.1-201ENST00000550077 HELBQ8NG08 1087 aaPredicted RBP11.21□□□□□ -0.61
AC055716.1-201ENST00000550077 CDC5LQ99459 802 aaKnown RBP11.21□□□□□ -0.61
AC055716.1-201ENST00000550077 PRO3102Q9H379 93 aa11.21□□□□□ -0.61
AC055716.1-201ENST00000550077 VEZTQ9HBM0 779 aa11.21□□□□□ -0.61
AC055716.1-201ENST00000550077 SPDYE2BA6NHP3 402 aa11.2□□□□□ -0.62
AC055716.1-201ENST00000550077 SPDYE6P0CI01 402 aa11.2□□□□□ -0.62
AC055716.1-201ENST00000550077 TEPSINQ96N21 525 aa11.2□□□□□ -0.62
AC055716.1-201ENST00000550077 LEMD3Q9Y2U8 911 aa11.2□□□□□ -0.62
AC055716.1-201ENST00000550077 ARAP2Q8WZ64 1704 aa11.2□□□□□ -0.62
AC055716.1-201ENST00000550077 ALPK3Q96L96 1907 aa11.19□□□□□ -0.62
AC055716.1-201ENST00000550077 CCL15-CCL14A0A0B4J2E2 113 aa11.19□□□□□ -0.62
AC055716.1-201ENST00000550077 IREB2P48200 963 aaKnown RBP11.19□□□□□ -0.62
AC055716.1-201ENST00000550077 CHRNDQ07001 517 aa11.19□□□□□ -0.62
AC055716.1-201ENST00000550077 TAF1CQ15572 869 aaPredicted RBP11.19□□□□□ -0.62
AC055716.1-201ENST00000550077 CCL15Q16663 113 aa11.19□□□□□ -0.62
AC055716.1-201ENST00000550077 G2E3Q7L622 706 aa11.19□□□□□ -0.62
AC055716.1-201ENST00000550077 ANKRD13AQ8IZ07 590 aa11.19□□□□□ -0.62
AC055716.1-201ENST00000550077 TSPYL6Q8N831 410 aa11.19□□□□□ -0.62
AC055716.1-201ENST00000550077 PI4KAP2A4QPH2 592 aa11.18□□□□□ -0.62
AC055716.1-201ENST00000550077 ITGA6P23229 1130 aa11.18□□□□□ -0.62
AC055716.1-201ENST00000550077 CASP7P55210 303 aa11.18□□□□□ -0.62
AC055716.1-201ENST00000550077 VGLL4Q14135 290 aa11.18□□□□□ -0.62
AC055716.1-201ENST00000550077 GRIK5Q16478 980 aa11.18□□□□□ -0.62
AC055716.1-201ENST00000550077 SUPT20HL1Q3ZLR7 823 aa11.18□□□□□ -0.62
AC055716.1-201ENST00000550077 OTUD7BQ6GQQ9 843 aa11.18□□□□□ -0.62
AC055716.1-201ENST00000550077 UBE3BQ7Z3V4 1068 aa11.18□□□□□ -0.62
AC055716.1-201ENST00000550077 UBE2Q1Q7Z7E8 422 aa11.18□□□□□ -0.62
AC055716.1-201ENST00000550077 NBPF11Q86T75 865 aa11.18□□□□□ -0.62
AC055716.1-201ENST00000550077 PI4KAP1Q8N8J0 262 aa11.18□□□□□ -0.62
AC055716.1-201ENST00000550077 DPF3Q92784 378 aa11.18□□□□□ -0.62
AC055716.1-201ENST00000550077 RUNDC1Q96C34 613 aa11.18□□□□□ -0.62
AC055716.1-201ENST00000550077 LRCH3Q96II8 777 aa11.18□□□□□ -0.62
AC055716.1-201ENST00000550077 TDRD3Q9H7E2 651 aaKnown RBP11.18□□□□□ -0.62
AC055716.1-201ENST00000550077 COL6A3P12111 3177 aa11.17□□□□□ -0.62
AC055716.1-201ENST00000550077 NEURL1BA8MQ27 555 aa11.17□□□□□ -0.62
AC055716.1-201ENST00000550077 H7C1W4 665 aa11.17□□□□□ -0.62
AC055716.1-201ENST00000550077 HSP90B1P14625 803 aaKnown RBP11.17□□□□□ -0.62
AC055716.1-201ENST00000550077 TMEM39BQ9GZU3 492 aa11.17□□□□□ -0.62
AC055716.1-201ENST00000550077 ZFYVE28Q9HCC9 887 aa11.17□□□□□ -0.62
AC055716.1-201ENST00000550077 ZNF70Q9UC06 446 aaPredicted RBP11.17□□□□□ -0.62
AC055716.1-201ENST00000550077 ADAMTS8Q9UP79 889 aa11.17□□□□□ -0.62
AC055716.1-201ENST00000550077 PPP2R3BQ9Y5P8 575 aa11.17□□□□□ -0.62
AC055716.1-201ENST00000550077 UNCXA6NJT0 531 aa11.16□□□□□ -0.62
AC055716.1-201ENST00000550077 TCP10L2B9ZVM9 353 aa11.16□□□□□ -0.62
AC055716.1-201ENST00000550077 IGHMBP2P38935 993 aaKnown RBP11.16□□□□□ -0.62
AC055716.1-201ENST00000550077 MMP14P50281 582 aa11.16□□□□□ -0.62
AC055716.1-201ENST00000550077 RBM5P52756 815 aaKnown RBP eCLIP11.16□□□□□ -0.62
AC055716.1-201ENST00000550077 LACTBP83111 547 aaPredicted RBP11.16□□□□□ -0.62
AC055716.1-201ENST00000550077 KSR2Q6VAB6 950 aa11.16□□□□□ -0.62
AC055716.1-201ENST00000550077 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.16□□□□□ -0.62
AC055716.1-201ENST00000550077 MGAMO43451 1857 aa11.16□□□□□ -0.62
AC055716.1-201ENST00000550077 CEP290O15078 2479 aa11.16□□□□□ -0.62
AC055716.1-201ENST00000550077 RANBP2P49792 3224 aaKnown RBP11.15□□□□□ -0.62
AC055716.1-201ENST00000550077 BTBD19C9JJ37 291 aa11.15□□□□□ -0.62
AC055716.1-201ENST00000550077 CSF1RP07333 972 aa11.15□□□□□ -0.62
AC055716.1-201ENST00000550077 IL1R1P14778 569 aa11.15□□□□□ -0.62
AC055716.1-201ENST00000550077 CACNB3P54284 484 aa11.15□□□□□ -0.62
AC055716.1-201ENST00000550077 SPDYE2Q495Y8 402 aa11.15□□□□□ -0.62
AC055716.1-201ENST00000550077 TRIM47Q96LD4 638 aa11.15□□□□□ -0.62
AC055716.1-201ENST00000550077 ANKRD2Q9GZV1 360 aa11.15□□□□□ -0.62
AC055716.1-201ENST00000550077 TLR2O60603 784 aa11.14□□□□□ -0.63
AC055716.1-201ENST00000550077 KCNJ4P48050 445 aa11.14□□□□□ -0.63
AC055716.1-201ENST00000550077 MAP3K9P80192 1104 aa11.14□□□□□ -0.63
AC055716.1-201ENST00000550077 DIEXFQ68CQ4 756 aaKnown RBP11.14□□□□□ -0.63
AC055716.1-201ENST00000550077 ZKSCAN4Q969J2 545 aaPredicted RBP11.14□□□□□ -0.63
AC055716.1-201ENST00000550077 ZNF594Q96JF6 807 aaPredicted RBP11.14□□□□□ -0.63
AC055716.1-201ENST00000550077 MPHOSPH8Q99549 860 aa11.14□□□□□ -0.63
AC055716.1-201ENST00000550077 CPA4Q9UI42 421 aa11.14□□□□□ -0.63
AC055716.1-201ENST00000550077 SNCAIPQ9Y6H5 919 aa11.14□□□□□ -0.63
AC055716.1-201ENST00000550077 IRF6O14896 467 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms