RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 RIMBP3CA6NJZ7 1639 aa10.59□□□□□ -0.71
PPFIA2-216ENST00000549396 RIMBP3BA6NNM3 1639 aa10.59□□□□□ -0.71
PPFIA2-216ENST00000549396 RIMBP3Q9UFD9 1639 aa10.59□□□□□ -0.71
PPFIA2-216ENST00000549396 SPDYE3A6NKU9 549 aa10.59□□□□□ -0.71
PPFIA2-216ENST00000549396 POTEB2H3BUK9 544 aa10.59□□□□□ -0.71
PPFIA2-216ENST00000549396 PRC1O43663 620 aa10.59□□□□□ -0.71
PPFIA2-216ENST00000549396 KRT2P35908 639 aa10.59□□□□□ -0.71
PPFIA2-216ENST00000549396 TMOD4Q9NZQ9 345 aa10.59□□□□□ -0.71
PPFIA2-216ENST00000549396 NMIQ13287 307 aaPredicted RBP10.59□□□□□ -0.71
PPFIA2-216ENST00000549396 ALG1Q9BT22 464 aa10.59□□□□□ -0.71
PPFIA2-216ENST00000549396 ARPP21Q9UBL0 812 aaPredicted RBP10.59□□□□□ -0.71
PPFIA2-216ENST00000549396 NIM1KQ8IY84 436 aa10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 PDCL2Q8N4E4 241 aa10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 FSIP1Q8NA03 581 aa10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 AS3MTQ9HBK9 375 aa10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 SFPQP23246 707 aaKnown RBP eCLIP10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 PRPHP41219 470 aa10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 BRDTQ58F21 947 aaPredicted RBP10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 ZBTB38Q8NAP3 1195 aaPredicted RBP10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 SNRKQ9NRH2 765 aa10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 EXOC1Q9NV70 894 aa10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 MAP3K15Q6ZN16 1313 aa10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 BICDL2A1A5D9 508 aa10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 PRIM1P49642 420 aaKnown RBP10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 CACNA2D4Q7Z3S7 1137 aa10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 KIAA1328Q86T90 577 aa10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 LRRC45Q96CN5 670 aa10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 GIGYF1O75420 1035 aaPredicted RBP10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 PARP1P09874 1014 aaKnown RBP10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 HOXA7P31268 230 aaPredicted RBP10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 DSCC1Q9BVC3 393 aa10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 PICK1Q9NRD5 415 aa10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 STX8Q9UNK0 236 aa10.58□□□□□ -0.72
PPFIA2-216ENST00000549396 TRIM75PA6NK02 468 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 NAPAP54920 295 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 TUBB4BP68371 445 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 FAM98CQ17RN3 349 aaKnown RBP10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 MICU3Q86XE3 530 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 TEX11Q8IYF3 940 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 MAGEB6Q8N7X4 407 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 CFAP100Q494V2 611 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 MCM9Q9NXL9 1143 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 LEMD3Q9Y2U8 911 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 SPATA31A3Q5VYP0 1347 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 ANKRD62A6NC57 917 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 NEBLO76041 1014 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 ATP5JP18859 108 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 TNNT3P45378 269 aaPredicted RBP10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 PABPC4Q13310 644 aaKnown RBP eCLIP10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 ARHGAP29Q52LW3 1261 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 CCDC174Q6PII3 467 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 UNC5CLQ8IV45 518 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 PLVAPQ9BX97 442 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 CWC15Q9P013 229 aaKnown RBP10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 A0A1B0GUL7 405 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 ADRA2BP18089 450 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 CTSWP56202 376 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 RUFY3Q7L099 469 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 KBTBD3Q8NAB2 608 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 KDM4AO75164 1064 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 BRF1Q92994 677 aa10.57□□□□□ -0.72
PPFIA2-216ENST00000549396 RPAP1Q9BWH6 1393 aaPredicted RBP10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 KIAA1210Q9ULL0 1709 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 TOP1P11387 765 aaKnown RBP10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 DCAF15Q66K64 600 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 HOOK3Q86VS8 718 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 CCDC112Q8NEF3 446 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 ANXA1P04083 346 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 CHMLP26374 656 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 PDE4CQ08493 712 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 MAP9Q49MG5 647 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 KRT79Q5XKE5 535 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 CREB3L3Q68CJ9 461 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 ALS2CR12Q96Q35 445 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 TM6SF1Q9BZW5 370 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 SLC5A4Q9NY91 659 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 DEXIO95424 95 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 APBA3O96018 575 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 RXRBP28702 533 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 PLEKHM2Q8IWE5 1019 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 MPNDQ8N594 471 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 PAF1Q8N7H5 531 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 RNF214Q8ND24 703 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 MRPS27Q92552 414 aaKnown RBP10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 GOPCQ9HD26 462 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 RTN4Q9NQC3 1192 aaKnown RBP10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 USP19O94966 1318 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 NEURL1BA8MQ27 555 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 IGHDP01880 384 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 KRT13P13646 458 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 UBE4AQ14139 1066 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 KLHL40Q2TBA0 621 aa10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 CWF19L2Q2TBE0 894 aaKnown RBP10.56□□□□□ -0.72
PPFIA2-216ENST00000549396 DNAJC10Q8IXB1 793 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 MSANTD4Q8NCY6 345 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 TMX3Q96JJ7 454 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 PCDHB15Q9Y5E8 787 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 MADDQ8WXG6 1647 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 PLCD1P51178 756 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms