RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 BRF1Q92994 677 aa13.06□□□□□ -0.32
LINC00661-204ENST00000549354 MAP7D2Q96T17 732 aa13.06□□□□□ -0.32
LINC00661-204ENST00000549354 BCL2L12Q9HB09 334 aa13.06□□□□□ -0.32
LINC00661-204ENST00000549354 ATP6V1DQ9Y5K8 247 aa13.06□□□□□ -0.32
LINC00661-204ENST00000549354 BTAF1O14981 1849 aa13.06□□□□□ -0.32
LINC00661-204ENST00000549354 ATP2B3Q16720 1220 aa13.06□□□□□ -0.32
LINC00661-204ENST00000549354 PARP10Q53GL7 1025 aa13.06□□□□□ -0.32
LINC00661-204ENST00000549354 CCDC186Q7Z3E2 898 aa13.06□□□□□ -0.32
LINC00661-204ENST00000549354 PUS3Q9BZE2 481 aaKnown RBP13.06□□□□□ -0.32
LINC00661-204ENST00000549354 DNAJC25Q9H1X3 360 aa13.06□□□□□ -0.32
LINC00661-204ENST00000549354 GPHNQ9NQX3 736 aaPredicted RBP13.06□□□□□ -0.32
LINC00661-204ENST00000549354 RIPOR2Q9Y4F9 1068 aa13.06□□□□□ -0.32
LINC00661-204ENST00000549354 IRS4O14654 1257 aaPredicted RBP13.05□□□□□ -0.32
LINC00661-204ENST00000549354 RXRAP19793 462 aa13.05□□□□□ -0.32
LINC00661-204ENST00000549354 GPTP24298 496 aa13.05□□□□□ -0.32
LINC00661-204ENST00000549354 IFIT5Q13325 482 aaKnown RBP13.05□□□□□ -0.32
LINC00661-204ENST00000549354 RC3H1Q5TC82 1133 aaKnown RBP13.05□□□□□ -0.32
LINC00661-204ENST00000549354 SYNE4Q8N205 404 aa13.05□□□□□ -0.32
LINC00661-204ENST00000549354 SPATA32Q96LK8 384 aa13.05□□□□□ -0.32
LINC00661-204ENST00000549354 GOLIM4O00461 696 aa13.05□□□□□ -0.32
LINC00661-204ENST00000549354 U2AF2P26368 475 aaKnown RBP eCLIP13.05□□□□□ -0.32
LINC00661-204ENST00000549354 ST3GAL1Q11201 340 aa13.05□□□□□ -0.32
LINC00661-204ENST00000549354 ARID5BQ14865 1188 aa13.05□□□□□ -0.32
LINC00661-204ENST00000549354 CLEC4GQ6UXB4 293 aa13.05□□□□□ -0.32
LINC00661-204ENST00000549354 GJD4Q96KN9 370 aaPredicted RBP13.05□□□□□ -0.32
LINC00661-204ENST00000549354 TRMT112Q9UI30 125 aaKnown RBP13.05□□□□□ -0.32
LINC00661-204ENST00000549354 DDX60Q8IY21 1712 aaKnown RBP13.05□□□□□ -0.32
LINC00661-204ENST00000549354 RTL9Q8NET4 1388 aa13.05□□□□□ -0.32
LINC00661-204ENST00000549354 CCDC192P0DO97 292 aa13.05□□□□□ -0.32
LINC00661-204ENST00000549354 CCDC144CPQ8IYA2 1237 aa13.05□□□□□ -0.32
LINC00661-204ENST00000549354 CCDC82Q8N4S0 544 aa13.05□□□□□ -0.32
LINC00661-204ENST00000549354 AKAP2Q9Y2D5 859 aa13.05□□□□□ -0.32
LINC00661-204ENST00000549354 RIC1Q4ADV7 1423 aa13.04□□□□□ -0.32
LINC00661-204ENST00000549354 LY75O60449 1722 aa13.04□□□□□ -0.32
LINC00661-204ENST00000549354 ABCC12Q96J65 1359 aa13.04□□□□□ -0.32
LINC00661-204ENST00000549354 ANO6Q4KMQ2 910 aa13.04□□□□□ -0.32
LINC00661-204ENST00000549354 LINC00116Q8NCU8 138 aa13.04□□□□□ -0.32
LINC00661-204ENST00000549354 MAP4K1Q92918 833 aa13.04□□□□□ -0.32
LINC00661-204ENST00000549354 TNMDQ9H2S6 317 aa13.04□□□□□ -0.32
LINC00661-204ENST00000549354 CEP126Q9P2H0 1117 aa13.04□□□□□ -0.32
LINC00661-204ENST00000549354 POLR3DP05423 398 aaPredicted RBP13.04□□□□□ -0.32
LINC00661-204ENST00000549354 HSPA1LP34931 641 aa13.04□□□□□ -0.32
LINC00661-204ENST00000549354 CHAF1AQ13111 956 aaPredicted RBP13.04□□□□□ -0.32
LINC00661-204ENST00000549354 NECTIN1Q15223 517 aa13.04□□□□□ -0.32
LINC00661-204ENST00000549354 VPS53Q5VIR6 699 aa13.04□□□□□ -0.32
LINC00661-204ENST00000549354 SUSD4Q5VX71 490 aa13.04□□□□□ -0.32
LINC00661-204ENST00000549354 NUP62CLQ9H1M0 184 aa13.04□□□□□ -0.32
LINC00661-204ENST00000549354 TMX1Q9H3N1 280 aa13.04□□□□□ -0.32
LINC00661-204ENST00000549354 SBF2Q86WG5 1849 aa13.04□□□□□ -0.32
LINC00661-204ENST00000549354 ATP2B1P20020 1258 aa13.03□□□□□ -0.32
LINC00661-204ENST00000549354 SCN7AQ01118 1682 aa13.03□□□□□ -0.32
LINC00661-204ENST00000549354 CCDC171Q6TFL3 1326 aa13.03□□□□□ -0.32
LINC00661-204ENST00000549354 A0A1B0GUL7 405 aa13.03□□□□□ -0.32
LINC00661-204ENST00000549354 ITGA6P23229 1130 aa13.03□□□□□ -0.32
LINC00661-204ENST00000549354 GORABQ5T7V8 394 aa13.03□□□□□ -0.32
LINC00661-204ENST00000549354 TTLL5Q6EMB2 1281 aa13.03□□□□□ -0.32
LINC00661-204ENST00000549354 CCDC94Q9BW85 323 aaPredicted RBP13.03□□□□□ -0.32
LINC00661-204ENST00000549354 TM6SF1Q9BZW5 370 aa13.03□□□□□ -0.32
LINC00661-204ENST00000549354 GREM2Q9H772 168 aa13.03□□□□□ -0.32
LINC00661-204ENST00000549354 PRDM4Q9UKN5 801 aa13.03□□□□□ -0.32
LINC00661-204ENST00000549354 KRT85P78386 507 aa13.03□□□□□ -0.32
LINC00661-204ENST00000549354 TYRO3Q06418 890 aa13.03□□□□□ -0.32
LINC00661-204ENST00000549354 WASHC4Q2M389 1173 aa13.03□□□□□ -0.32
LINC00661-204ENST00000549354 UVSSAQ2YD98 709 aa13.03□□□□□ -0.32
LINC00661-204ENST00000549354 VGLL2Q8N8G2 317 aa13.03□□□□□ -0.32
LINC00661-204ENST00000549354 ANKRD18BA2A2Z9 1011 aa13.02□□□□□ -0.32
LINC00661-204ENST00000549354 APOBRQ0VD83 1088 aa13.02□□□□□ -0.32
LINC00661-204ENST00000549354 MAP3K11Q16584 847 aa13.02□□□□□ -0.32
LINC00661-204ENST00000549354 AEBP2Q6ZN18 517 aaPredicted RBP13.02□□□□□ -0.32
LINC00661-204ENST00000549354 KBTBD3Q8NAB2 608 aa13.02□□□□□ -0.32
LINC00661-204ENST00000549354 ZNF512BQ96KM6 892 aaPredicted RBP13.02□□□□□ -0.32
LINC00661-204ENST00000549354 UTP14AQ9BVJ6 771 aaKnown RBP13.02□□□□□ -0.32
LINC00661-204ENST00000549354 SH3TC1Q8TE82 1336 aa13.02□□□□□ -0.32
LINC00661-204ENST00000549354 NR1I2O75469 434 aa13.02□□□□□ -0.33
LINC00661-204ENST00000549354 NTSR2O95665 410 aa13.02□□□□□ -0.33
LINC00661-204ENST00000549354 USPL1Q5W0Q7 1092 aa13.02□□□□□ -0.33
LINC00661-204ENST00000549354 PDCL2Q8N4E4 241 aa13.02□□□□□ -0.33
LINC00661-204ENST00000549354 SLC27A2O14975 620 aa13.01□□□□□ -0.33
LINC00661-204ENST00000549354 TSGA10IPQ3SY00 556 aa13.01□□□□□ -0.33
LINC00661-204ENST00000549354 KIAA1524Q8TCG1 905 aa13.01□□□□□ -0.33
LINC00661-204ENST00000549354 ARAP2Q8WZ64 1704 aa13.01□□□□□ -0.33
LINC00661-204ENST00000549354 HMGN5P82970 282 aaKnown RBP13.01□□□□□ -0.33
LINC00661-204ENST00000549354 Q6ZUG5 572 aa13.01□□□□□ -0.33
LINC00661-204ENST00000549354 AFF2P51816 1311 aa13.01□□□□□ -0.33
LINC00661-204ENST00000549354 PTF1AQ7RTS3 328 aa13.01□□□□□ -0.33
LINC00661-204ENST00000549354 ZNF652Q9Y2D9 606 aa13.01□□□□□ -0.33
LINC00661-204ENST00000549354 LETM1O95202 739 aaPredicted RBP13□□□□□ -0.33
LINC00661-204ENST00000549354 MAPK8IP2Q13387 824 aaPredicted RBP13□□□□□ -0.33
LINC00661-204ENST00000549354 PI16Q6UXB8 463 aa13□□□□□ -0.33
LINC00661-204ENST00000549354 FAM177A1Q8N128 213 aaPredicted RBP13□□□□□ -0.33
LINC00661-204ENST00000549354 CBX8Q9HC52 389 aa13□□□□□ -0.33
LINC00661-204ENST00000549354 MRVI1Q9Y6F6 885 aa13□□□□□ -0.33
LINC00661-204ENST00000549354 TAF1LQ8IZX4 1826 aa13□□□□□ -0.33
LINC00661-204ENST00000549354 PRIMPOLQ96LW4 560 aa13□□□□□ -0.33
LINC00661-204ENST00000549354 FUCA2Q9BTY2 467 aa13□□□□□ -0.33
LINC00661-204ENST00000549354 PAG1Q9NWQ8 432 aa13□□□□□ -0.33
LINC00661-204ENST00000549354 TRPC5Q9UL62 973 aaPredicted RBP13□□□□□ -0.33
LINC00661-204ENST00000549354 TAF5LO75529 589 aa13□□□□□ -0.33
LINC00661-204ENST00000549354 RPS6KA4O75676 772 aa13□□□□□ -0.33
LINC00661-204ENST00000549354 APPP05067 770 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms