RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 DPCR1Q3MIW9 517 aa13.91□□□□□ -0.18
RAPGEF3-219ENST00000549151 SYNE3Q6ZMZ3 975 aa13.91□□□□□ -0.18
RAPGEF3-219ENST00000549151 TOM1L2Q6ZVM7 507 aa13.91□□□□□ -0.18
RAPGEF3-219ENST00000549151 FAM89AQ96GI7 184 aa13.91□□□□□ -0.18
RAPGEF3-219ENST00000549151 FGAP02671 866 aa13.9□□□□□ -0.18
RAPGEF3-219ENST00000549151 KLHL34Q8N239 644 aa13.9□□□□□ -0.18
RAPGEF3-219ENST00000549151 ENGASEQ8NFI3 743 aa13.9□□□□□ -0.18
RAPGEF3-219ENST00000549151 DENND2AQ9ULE3 1009 aa13.9□□□□□ -0.18
RAPGEF3-219ENST00000549151 SLIT3O75094 1523 aa13.9□□□□□ -0.18
RAPGEF3-219ENST00000549151 CAVIN2O95810 425 aa13.9□□□□□ -0.18
RAPGEF3-219ENST00000549151 ZAP70P43403 619 aa13.9□□□□□ -0.18
RAPGEF3-219ENST00000549151 XAGE2Q96GT9 111 aa13.9□□□□□ -0.18
RAPGEF3-219ENST00000549151 AIFM3Q96NN9 605 aa13.9□□□□□ -0.18
RAPGEF3-219ENST00000549151 KAT6BQ8WYB5 2073 aa13.9□□□□□ -0.18
RAPGEF3-219ENST00000549151 STK11IPQ8N1F8 1099 aa13.89□□□□□ -0.19
RAPGEF3-219ENST00000549151 SYNE4Q8N205 404 aa13.89□□□□□ -0.19
RAPGEF3-219ENST00000549151 NAT10Q9H0A0 1025 aaKnown RBP13.89□□□□□ -0.19
RAPGEF3-219ENST00000549151 PUS7LQ9H0K6 701 aaKnown RBP13.89□□□□□ -0.19
RAPGEF3-219ENST00000549151 PRDM4Q9UKN5 801 aa13.89□□□□□ -0.19
RAPGEF3-219ENST00000549151 PALLDQ8WX93 1383 aa13.89□□□□□ -0.19
RAPGEF3-219ENST00000549151 CTIFO43310 598 aaKnown RBP13.89□□□□□ -0.19
RAPGEF3-219ENST00000549151 GNL2Q13823 731 aaKnown RBP13.89□□□□□ -0.19
RAPGEF3-219ENST00000549151 PTPN21Q16825 1174 aa13.89□□□□□ -0.19
RAPGEF3-219ENST00000549151 TMC6Q7Z403 805 aa13.89□□□□□ -0.19
RAPGEF3-219ENST00000549151 ZNF274Q96GC6 653 aaPredicted RBP13.89□□□□□ -0.19
RAPGEF3-219ENST00000549151 MRFAP1L1Q96HT8 127 aa13.89□□□□□ -0.19
RAPGEF3-219ENST00000549151 MRC1P22897 1456 aa13.89□□□□□ -0.19
RAPGEF3-219ENST00000549151 GPTP24298 496 aa13.89□□□□□ -0.19
RAPGEF3-219ENST00000549151 ANKRD7Q92527 254 aa13.89□□□□□ -0.19
RAPGEF3-219ENST00000549151 IFNKQ9P0W0 207 aa13.89□□□□□ -0.19
RAPGEF3-219ENST00000549151 SIPA1L3O60292 1781 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF3-219ENST00000549151 SPTLC2O15270 562 aa13.88□□□□□ -0.19
RAPGEF3-219ENST00000549151 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.88□□□□□ -0.19
RAPGEF3-219ENST00000549151 C1orf167Q5SNV9 1468 aa13.88□□□□□ -0.19
RAPGEF3-219ENST00000549151 ZSCAN20P17040 1043 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF3-219ENST00000549151 LMOD1P29536 600 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF3-219ENST00000549151 FMR1NBQ8N0W7 255 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF3-219ENST00000549151 LINC00301Q8NCQ3 95 aa13.88□□□□□ -0.19
RAPGEF3-219ENST00000549151 RFX7Q2KHR2 1363 aa13.88□□□□□ -0.19
RAPGEF3-219ENST00000549151 A0A0U1RQG5 324 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF3-219ENST00000549151 SLC3A2P08195 630 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-219ENST00000549151 SARM1Q6SZW1 724 aa13.88□□□□□ -0.19
RAPGEF3-219ENST00000549151 XPO4Q9C0E2 1151 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-219ENST00000549151 STRN4Q9NRL3 753 aa13.88□□□□□ -0.19
RAPGEF3-219ENST00000549151 ZNF215Q9UL58 517 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF3-219ENST00000549151 PAXBP1Q9Y5B6 917 aa13.88□□□□□ -0.19
RAPGEF3-219ENST00000549151 SALL1Q9NSC2 1324 aa13.87□□□□□ -0.19
RAPGEF3-219ENST00000549151 KIF28PB7ZC32 967 aa13.87□□□□□ -0.19
RAPGEF3-219ENST00000549151 ZNF213O14771 459 aa13.87□□□□□ -0.19
RAPGEF3-219ENST00000549151 HSP90AA4PQ58FG1 418 aa13.87□□□□□ -0.19
RAPGEF3-219ENST00000549151 ADALQ6DHV7 355 aa13.87□□□□□ -0.19
RAPGEF3-219ENST00000549151 AGXT2Q9BYV1 514 aa13.87□□□□□ -0.19
RAPGEF3-219ENST00000549151 CTNNA3Q9UI47 895 aa13.87□□□□□ -0.19
RAPGEF3-219ENST00000549151 IDH1O75874 414 aaKnown RBP13.87□□□□□ -0.19
RAPGEF3-219ENST00000549151 CDC25BP30305 580 aa13.87□□□□□ -0.19
RAPGEF3-219ENST00000549151 MYSM1Q5VVJ2 828 aa13.87□□□□□ -0.19
RAPGEF3-219ENST00000549151 PRDM11Q9NQV5 511 aa13.87□□□□□ -0.19
RAPGEF3-219ENST00000549151 KIAA1468Q9P260 1216 aa13.87□□□□□ -0.19
RAPGEF3-219ENST00000549151 GPAA1O43292 621 aa13.86□□□□□ -0.19
RAPGEF3-219ENST00000549151 CCZ1BP86790 482 aa13.86□□□□□ -0.19
RAPGEF3-219ENST00000549151 CCZ1P86791 482 aaPredicted RBP13.86□□□□□ -0.19
RAPGEF3-219ENST00000549151 MICU3Q86XE3 530 aa13.86□□□□□ -0.19
RAPGEF3-219ENST00000549151 CCDC191Q8NCU4 936 aa13.86□□□□□ -0.19
RAPGEF3-219ENST00000549151 ZCRB1Q8TBF4 217 aaKnown RBP13.86□□□□□ -0.19
RAPGEF3-219ENST00000549151 PHKBQ93100 1093 aa13.86□□□□□ -0.19
RAPGEF3-219ENST00000549151 RTEL1Q9NZ71 1219 aa13.86□□□□□ -0.19
RAPGEF3-219ENST00000549151 ZNF202O95125 648 aa13.86□□□□□ -0.19
RAPGEF3-219ENST00000549151 FBXO18Q8NFZ0 1043 aa13.86□□□□□ -0.19
RAPGEF3-219ENST00000549151 NCOA7Q8NI08 942 aa13.86□□□□□ -0.19
RAPGEF3-219ENST00000549151 LAMA4Q16363 1823 aa13.86□□□□□ -0.19
RAPGEF3-219ENST00000549151 SCN11AQ9UI33 1791 aa13.86□□□□□ -0.19
RAPGEF3-219ENST00000549151 DHX16O60231 1041 aaKnown RBP13.86□□□□□ -0.19
RAPGEF3-219ENST00000549151 TRDNQ13061 729 aa13.86□□□□□ -0.19
RAPGEF3-219ENST00000549151 METTL24Q5JXM2 366 aa13.86□□□□□ -0.19
RAPGEF3-219ENST00000549151 MYL10Q9BUA6 226 aa13.86□□□□□ -0.19
RAPGEF3-219ENST00000549151 PHRF1Q9P1Y6 1649 aaKnown RBP13.85□□□□□ -0.19
RAPGEF3-219ENST00000549151 FOXP2O15409 715 aa13.85□□□□□ -0.19
RAPGEF3-219ENST00000549151 ANTXR2P58335 489 aa13.85□□□□□ -0.19
RAPGEF3-219ENST00000549151 GPR108Q9NPR9 543 aa13.85□□□□□ -0.19
RAPGEF3-219ENST00000549151 KCNG4Q8TDN1 519 aa13.85□□□□□ -0.19
RAPGEF3-219ENST00000549151 INCENPQ9NQS7 918 aa13.85□□□□□ -0.19
RAPGEF3-219ENST00000549151 HPS5Q9UPZ3 1129 aa13.85□□□□□ -0.19
RAPGEF3-219ENST00000549151 PFKFB1P16118 471 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 IFIT5Q13325 482 aaKnown RBP13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 NFXL1Q6ZNB6 911 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 CCAR2Q8N163 923 aaKnown RBP13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 NKX2-3Q8TAU0 364 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 NEMFO60524 1076 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 ATP1A3P13637 1013 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 LRRFIP1Q32MZ4 808 aaKnown RBP13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 SLC9C2Q5TAH2 1124 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 ANO1Q5XXA6 986 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 ATL3Q6DD88 541 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 NBPF11Q86T75 865 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 CCDC82Q8N4S0 544 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 ARFGEF2Q9Y6D5 1785 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 SFPQP23246 707 aaKnown RBP eCLIP13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 DMTNQ08495 405 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 GOLGA8FQ08AF8 430 aa13.84□□□□□ -0.19
RAPGEF3-219ENST00000549151 GOLGA8DPQ0D2H9 430 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms