RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 WWC3Q9ULE0 1092 aa8.45□□□□□ -1.06
LDHC-209ENST00000545848 ANKRD36CQ5JPF3 1778 aa8.45□□□□□ -1.06
LDHC-209ENST00000545848 CCDC88AQ3V6T2 1871 aa8.45□□□□□ -1.06
LDHC-209ENST00000545848 ERVV-2B6SEH9 535 aa8.44□□□□□ -1.06
LDHC-209ENST00000545848 TPRNQ4KMQ1 711 aa8.44□□□□□ -1.06
LDHC-209ENST00000545848 CCDC146Q8IYE0 955 aa8.44□□□□□ -1.06
LDHC-209ENST00000545848 MTFR1LQ9H019 292 aa8.44□□□□□ -1.06
LDHC-209ENST00000545848 SPON1Q9HCB6 807 aa8.44□□□□□ -1.06
LDHC-209ENST00000545848 TMPRSS4Q9NRS4 437 aa8.44□□□□□ -1.06
LDHC-209ENST00000545848 MIS18AQ9NYP9 233 aa8.44□□□□□ -1.06
LDHC-209ENST00000545848 TFCP2L1Q9NZI6 479 aa8.44□□□□□ -1.06
LDHC-209ENST00000545848 ARFGEF1Q9Y6D6 1849 aa8.44□□□□□ -1.06
LDHC-209ENST00000545848 TAF1P21675 1872 aa8.44□□□□□ -1.06
LDHC-209ENST00000545848 CARMIL3Q8ND23 1372 aa8.44□□□□□ -1.06
LDHC-209ENST00000545848 SBF1O95248 1867 aa8.43□□□□□ -1.06
LDHC-209ENST00000545848 SPINT1O43278 529 aa8.43□□□□□ -1.06
LDHC-209ENST00000545848 U2AF1L5P0DN76 240 aaPredicted RBP8.43□□□□□ -1.06
LDHC-209ENST00000545848 CRKLP46109 303 aaKnown RBP8.43□□□□□ -1.06
LDHC-209ENST00000545848 CABP4P57796 275 aa8.43□□□□□ -1.06
LDHC-209ENST00000545848 U2AF1Q01081 240 aaKnown RBP eCLIP8.43□□□□□ -1.06
LDHC-209ENST00000545848 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.43□□□□□ -1.06
LDHC-209ENST00000545848 AMOTQ4VCS5 1084 aa8.43□□□□□ -1.06
LDHC-209ENST00000545848 SLC51AQ86UW1 340 aa8.43□□□□□ -1.06
LDHC-209ENST00000545848 ZNF784Q8NCA9 323 aaPredicted RBP8.43□□□□□ -1.06
LDHC-209ENST00000545848 ZNF496Q96IT1 587 aaPredicted RBP8.43□□□□□ -1.06
LDHC-209ENST00000545848 AGBL1Q96MI9 1066 aa8.43□□□□□ -1.06
LDHC-209ENST00000545848 ZBTB1Q9Y2K1 713 aa8.43□□□□□ -1.06
LDHC-209ENST00000545848 RRP7AQ9Y3A4 280 aaKnown RBP8.43□□□□□ -1.06
LDHC-209ENST00000545848 PXDNLA1KZ92 1463 aa8.43□□□□□ -1.06
LDHC-209ENST00000545848 ARFGEF2Q9Y6D5 1785 aa8.43□□□□□ -1.06
LDHC-209ENST00000545848 ERVH48-1M5A8F1 160 aa8.42□□□□□ -1.06
LDHC-209ENST00000545848 PPFIA3O75145 1194 aa8.42□□□□□ -1.06
LDHC-209ENST00000545848 VSIG8P0DPA2 414 aa8.42□□□□□ -1.06
LDHC-209ENST00000545848 YBX3P16989 372 aaKnown RBP eCLIP8.42□□□□□ -1.06
LDHC-209ENST00000545848 RELBQ01201 579 aa8.42□□□□□ -1.06
LDHC-209ENST00000545848 DDR1Q08345 913 aa8.42□□□□□ -1.06
LDHC-209ENST00000545848 C1orf141Q5JVX7 400 aa8.42□□□□□ -1.06
LDHC-209ENST00000545848 SYT17Q9BSW7 474 aa8.42□□□□□ -1.06
LDHC-209ENST00000545848 PRKRIP1Q9H875 184 aaPredicted RBP8.42□□□□□ -1.06
LDHC-209ENST00000545848 CNTNAP4Q9C0A0 1308 aa8.42□□□□□ -1.06
LDHC-209ENST00000545848 C10orf71Q711Q0 1435 aa8.42□□□□□ -1.06
LDHC-209ENST00000545848 HEG1Q9ULI3 1381 aa8.41□□□□□ -1.06
LDHC-209ENST00000545848 SOS1Q07889 1333 aaPredicted RBP8.41□□□□□ -1.06
LDHC-209ENST00000545848 MYBBP1AQ9BQG0 1328 aaKnown RBP8.41□□□□□ -1.06
LDHC-209ENST00000545848 FIGNL2A6NMB9 653 aa8.41□□□□□ -1.06
LDHC-209ENST00000545848 ZBBXA8MT70 800 aa8.41□□□□□ -1.06
LDHC-209ENST00000545848 CYP19A1P11511 503 aaPredicted RBP8.41□□□□□ -1.06
LDHC-209ENST00000545848 KRT24Q2M2I5 525 aa8.41□□□□□ -1.06
LDHC-209ENST00000545848 ESPNB1AK53 854 aa8.4□□□□□ -1.06
LDHC-209ENST00000545848 FBXO45P0C2W1 286 aa8.4□□□□□ -1.06
LDHC-209ENST00000545848 GYS1P13807 737 aa8.4□□□□□ -1.06
LDHC-209ENST00000545848 ZSCAN1Q8NBB4 408 aa8.4□□□□□ -1.06
LDHC-209ENST00000545848 SMARCC1Q92922 1105 aaPredicted RBP8.4□□□□□ -1.06
LDHC-209ENST00000545848 ARXQ96QS3 562 aa8.4□□□□□ -1.06
LDHC-209ENST00000545848 DDX60Q8IY21 1712 aaKnown RBP8.4□□□□□ -1.07
LDHC-209ENST00000545848 COL15A1P39059 1388 aa8.39□□□□□ -1.07
LDHC-209ENST00000545848 SLX4Q8IY92 1834 aa8.39□□□□□ -1.07
LDHC-209ENST00000545848 GNAT3A8MTJ3 354 aa8.39□□□□□ -1.07
LDHC-209ENST00000545848 LILRA1O75019 489 aa8.39□□□□□ -1.07
LDHC-209ENST00000545848 LORP23490 312 aaPredicted RBP8.39□□□□□ -1.07
LDHC-209ENST00000545848 CTSOP43234 321 aaPredicted RBP8.39□□□□□ -1.07
LDHC-209ENST00000545848 PTSQ03393 145 aa8.39□□□□□ -1.07
LDHC-209ENST00000545848 NBPF10Q6P3W6 841 aaKnown RBP8.39□□□□□ -1.07
LDHC-209ENST00000545848 NBPF15Q8N660 670 aa8.39□□□□□ -1.07
LDHC-209ENST00000545848 INSM2Q96T92 566 aaPredicted RBP8.39□□□□□ -1.07
LDHC-209ENST00000545848 ZNF395Q9H8N7 513 aaPredicted RBP8.39□□□□□ -1.07
LDHC-209ENST00000545848 TIAM2Q8IVF5 1701 aa8.39□□□□□ -1.07
LDHC-209ENST00000545848 USP42Q9H9J4 1324 aaKnown RBP8.38□□□□□ -1.07
LDHC-209ENST00000545848 A1BGP04217 495 aa8.38□□□□□ -1.07
LDHC-209ENST00000545848 ADH1AP07327 375 aa8.38□□□□□ -1.07
LDHC-209ENST00000545848 HSP90AB1P08238 724 aaKnown RBP8.38□□□□□ -1.07
LDHC-209ENST00000545848 SSFA2P28290 1259 aa8.38□□□□□ -1.07
LDHC-209ENST00000545848 ADD1P35611 737 aaKnown RBP8.38□□□□□ -1.07
LDHC-209ENST00000545848 ZNF790Q6PG37 636 aa8.38□□□□□ -1.07
LDHC-209ENST00000545848 BANK1Q8NDB2 785 aa8.38□□□□□ -1.07
LDHC-209ENST00000545848 ADAMTS8Q9UP79 889 aa8.38□□□□□ -1.07
LDHC-209ENST00000545848 PCDHB9Q9Y5E1 797 aa8.38□□□□□ -1.07
LDHC-209ENST00000545848 USP16Q9Y5T5 823 aa8.38□□□□□ -1.07
LDHC-209ENST00000545848 FER1L6Q2WGJ9 1857 aa8.37□□□□□ -1.07
LDHC-209ENST00000545848 GIGYF1O75420 1035 aaPredicted RBP8.37□□□□□ -1.07
LDHC-209ENST00000545848 RPS6KA4O75676 772 aa8.37□□□□□ -1.07
LDHC-209ENST00000545848 MMP10P09238 476 aa8.37□□□□□ -1.07
LDHC-209ENST00000545848 NFE2L2Q16236 605 aa8.37□□□□□ -1.07
LDHC-209ENST00000545848 MTMR14Q8NCE2 650 aa8.37□□□□□ -1.07
LDHC-209ENST00000545848 GAS2L2Q8NHY3 880 aa8.37□□□□□ -1.07
LDHC-209ENST00000545848 CFAP53Q96M91 514 aa8.37□□□□□ -1.07
LDHC-209ENST00000545848 POLMQ9NP87 494 aaPredicted RBP8.37□□□□□ -1.07
LDHC-209ENST00000545848 SPEF2Q9C093 1822 aa8.36□□□□□ -1.07
LDHC-209ENST00000545848 FAM181BA6NEQ2 426 aa8.36□□□□□ -1.07
LDHC-209ENST00000545848 ANXA1P04083 346 aa8.36□□□□□ -1.07
LDHC-209ENST00000545848 CANXP27824 592 aaKnown RBP8.36□□□□□ -1.07
LDHC-209ENST00000545848 RALBP1Q15311 655 aa8.36□□□□□ -1.07
LDHC-209ENST00000545848 PROSER3Q2NL68 480 aa8.36□□□□□ -1.07
LDHC-209ENST00000545848 USPL1Q5W0Q7 1092 aa8.36□□□□□ -1.07
LDHC-209ENST00000545848 LRP10Q7Z4F1 713 aa8.36□□□□□ -1.07
LDHC-209ENST00000545848 CYLDQ9NQC7 956 aa8.36□□□□□ -1.07
LDHC-209ENST00000545848 CCDC87Q9NVE4 849 aa8.36□□□□□ -1.07
LDHC-209ENST00000545848 PPP1R1BQ9UD71 204 aaPredicted RBP8.36□□□□□ -1.07
LDHC-209ENST00000545848 POLRMTO00411 1230 aaKnown RBP8.35□□□□□ -1.07
LDHC-209ENST00000545848 KCNA3P22001 575 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms