RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 NARFQ9UHQ1 456 aa20.18■□□□□ 0.82
PTPRO-209ENST00000543886 NSFL1CQ9UNZ2 370 aaKnown RBP20.18■□□□□ 0.82
PTPRO-209ENST00000543886 ZNF532Q9HCE3 1301 aa20.18■□□□□ 0.82
PTPRO-209ENST00000543886 CASZ1Q86V15 1759 aa20.18■□□□□ 0.82
PTPRO-209ENST00000543886 HAND2P61296 217 aa20.18■□□□□ 0.82
PTPRO-209ENST00000543886 RASGRF1Q13972 1273 aa20.18■□□□□ 0.82
PTPRO-209ENST00000543886 FAM182BQ5T319 152 aa20.18■□□□□ 0.82
PTPRO-209ENST00000543886 TBC1D9BQ66K14 1250 aa20.18■□□□□ 0.82
PTPRO-209ENST00000543886 ANKRD18AQ8IVF6 992 aa20.18■□□□□ 0.82
PTPRO-209ENST00000543886 SYAP1Q96A49 352 aaPredicted RBP20.18■□□□□ 0.82
PTPRO-209ENST00000543886 GJD4Q96KN9 370 aaPredicted RBP20.18■□□□□ 0.82
PTPRO-209ENST00000543886 SNAP23O00161 211 aa20.17■□□□□ 0.82
PTPRO-209ENST00000543886 ZPR1O75312 459 aa20.17■□□□□ 0.82
PTPRO-209ENST00000543886 SF3B3Q15393 1217 aaKnown RBP20.17■□□□□ 0.82
PTPRO-209ENST00000543886 FAM43AQ8N2R8 423 aa20.17■□□□□ 0.82
PTPRO-209ENST00000543886 NYXQ9GZU5 481 aa20.17■□□□□ 0.82
PTPRO-209ENST00000543886 TMEM63CQ9P1W3 806 aa20.17■□□□□ 0.82
PTPRO-209ENST00000543886 DOCK2Q92608 1830 aa20.17■□□□□ 0.82
PTPRO-209ENST00000543886 PFKFB2O60825 505 aa20.17■□□□□ 0.82
PTPRO-209ENST00000543886 MAP3K12Q12852 859 aa20.17■□□□□ 0.82
PTPRO-209ENST00000543886 AGXT2Q9BYV1 514 aa20.17■□□□□ 0.82
PTPRO-209ENST00000543886 WWC3Q9ULE0 1092 aa20.17■□□□□ 0.82
PTPRO-209ENST00000543886 ZNF213O14771 459 aa20.16■□□□□ 0.82
PTPRO-209ENST00000543886 APOBRQ0VD83 1088 aa20.16■□□□□ 0.82
PTPRO-209ENST00000543886 SMIM5Q71RC9 77 aa20.16■□□□□ 0.82
PTPRO-209ENST00000543886 CERKQ8TCT0 537 aa20.16■□□□□ 0.82
PTPRO-209ENST00000543886 LLPHQ9BRT6 129 aaKnown RBP20.16■□□□□ 0.82
PTPRO-209ENST00000543886 BCL2L12Q9HB09 334 aa20.16■□□□□ 0.82
PTPRO-209ENST00000543886 RTCBQ9Y3I0 505 aaKnown RBP20.16■□□□□ 0.82
PTPRO-209ENST00000543886 FIBPO43427 364 aa20.15■□□□□ 0.82
PTPRO-209ENST00000543886 GADD45BO75293 160 aaPredicted RBP20.15■□□□□ 0.82
PTPRO-209ENST00000543886 SCRN1Q12765 414 aa20.15■□□□□ 0.82
PTPRO-209ENST00000543886 CDC37L1Q7L3B6 337 aa20.15■□□□□ 0.82
PTPRO-209ENST00000543886 SETDB2Q96T68 719 aa20.15■□□□□ 0.82
PTPRO-209ENST00000543886 AFF2P51816 1311 aa20.15■□□□□ 0.82
PTPRO-209ENST00000543886 JAK2O60674 1132 aa20.15■□□□□ 0.82
PTPRO-209ENST00000543886 BCAMP50895 628 aa20.15■□□□□ 0.82
PTPRO-209ENST00000543886 DNM1Q05193 864 aaKnown RBP20.15■□□□□ 0.82
PTPRO-209ENST00000543886 C3orf67Q6ZVT6 689 aa20.15■□□□□ 0.82
PTPRO-209ENST00000543886 RALYLQ86SE5 291 aaKnown RBP20.15■□□□□ 0.82
PTPRO-209ENST00000543886 AIDAQ96BJ3 306 aa20.15■□□□□ 0.82
PTPRO-209ENST00000543886 SRP68Q9UHB9 627 aaKnown RBP20.15■□□□□ 0.82
PTPRO-209ENST00000543886 NAP1L2Q9ULW6 460 aaPredicted RBP20.15■□□□□ 0.82
PTPRO-209ENST00000543886 LY75O60449 1722 aa20.15■□□□□ 0.82
PTPRO-209ENST00000543886 COL24A1Q17RW2 1714 aa20.15■□□□□ 0.82
PTPRO-209ENST00000543886 COL4A1P02462 1669 aa20.14■□□□□ 0.82
PTPRO-209ENST00000543886 TCRBV5S4A2TA0A5A2 114 aa20.14■□□□□ 0.81
PTPRO-209ENST00000543886 APPP05067 770 aa20.14■□□□□ 0.81
PTPRO-209ENST00000543886 SLC10A5Q5PT55 438 aa20.14■□□□□ 0.81
PTPRO-209ENST00000543886 CHST3Q7LGC8 479 aa20.14■□□□□ 0.81
PTPRO-209ENST00000543886 CHMP4CQ96CF2 233 aa20.14■□□□□ 0.81
PTPRO-209ENST00000543886 A0A1B0GUL6 1792 aa20.14■□□□□ 0.81
PTPRO-209ENST00000543886 NBPF5PQ86XG9 351 aaPredicted RBP20.14■□□□□ 0.81
PTPRO-209ENST00000543886 MAGEB6Q8N7X4 407 aa20.14■□□□□ 0.81
PTPRO-209ENST00000543886 FAM184AQ8NB25 1140 aa20.14■□□□□ 0.81
PTPRO-209ENST00000543886 NCOA7Q8NI08 942 aa20.14■□□□□ 0.81
PTPRO-209ENST00000543886 TAF1LQ8IZX4 1826 aa20.13■□□□□ 0.81
PTPRO-209ENST00000543886 MCM5P33992 734 aa20.13■□□□□ 0.81
PTPRO-209ENST00000543886 UBE2HP62256 183 aa20.13■□□□□ 0.81
PTPRO-209ENST00000543886 FBXL16Q8N461 479 aa20.13■□□□□ 0.81
PTPRO-209ENST00000543886 ZNF274Q96GC6 653 aaPredicted RBP20.13■□□□□ 0.81
PTPRO-209ENST00000543886 BSDC1Q9NW68 430 aaPredicted RBP20.13■□□□□ 0.81
PTPRO-209ENST00000543886 SBF2Q86WG5 1849 aa20.13■□□□□ 0.81
PTPRO-209ENST00000543886 FERMT3Q86UX7 667 aa20.12■□□□□ 0.81
PTPRO-209ENST00000543886 SYCE3A1L190 88 aa20.12■□□□□ 0.81
PTPRO-209ENST00000543886 PHF14O94880 888 aa20.12■□□□□ 0.81
PTPRO-209ENST00000543886 DDX11Q96FC9 970 aa20.12■□□□□ 0.81
PTPRO-209ENST00000543886 KIF3AQ9Y496 699 aa20.12■□□□□ 0.81
PTPRO-209ENST00000543886 PRC1O43663 620 aa20.11■□□□□ 0.81
PTPRO-209ENST00000543886 HSPA1LP34931 641 aa20.11■□□□□ 0.81
PTPRO-209ENST00000543886 NASPP49321 788 aaPredicted RBP20.11■□□□□ 0.81
PTPRO-209ENST00000543886 KRT85P78386 507 aa20.11■□□□□ 0.81
PTPRO-209ENST00000543886 HMGN5P82970 282 aaKnown RBP20.11■□□□□ 0.81
PTPRO-209ENST00000543886 TRDNQ13061 729 aa20.11■□□□□ 0.81
PTPRO-209ENST00000543886 MB21D2Q8IYB1 491 aaPredicted RBP20.11■□□□□ 0.81
PTPRO-209ENST00000543886 SMARCC2Q8TAQ2 1214 aa20.11■□□□□ 0.81
PTPRO-209ENST00000543886 STRBPQ96SI9 672 aaKnown RBP20.11■□□□□ 0.81
PTPRO-209ENST00000543886 GNL3LQ9NVN8 582 aaKnown RBP20.11■□□□□ 0.81
PTPRO-209ENST00000543886 TAF1P21675 1872 aa20.11■□□□□ 0.81
PTPRO-209ENST00000543886 C4BP0C0L5 1744 aa20.11■□□□□ 0.81
PTPRO-209ENST00000543886 H3BQV1 296 aa20.11■□□□□ 0.81
PTPRO-209ENST00000543886 PDIA3P30101 505 aaKnown RBP20.11■□□□□ 0.81
PTPRO-209ENST00000543886 CCT2P78371 535 aaKnown RBP20.11■□□□□ 0.81
PTPRO-209ENST00000543886 IFFO2Q5TF58 517 aa20.11■□□□□ 0.81
PTPRO-209ENST00000543886 LRSAM1Q6UWE0 723 aa20.11■□□□□ 0.81
PTPRO-209ENST00000543886 NSUN7Q8NE18 718 aaKnown RBP20.11■□□□□ 0.81
PTPRO-209ENST00000543886 NLRP3Q96P20 1036 aa20.11■□□□□ 0.81
PTPRO-209ENST00000543886 TRPC5Q9UL62 973 aaPredicted RBP20.11■□□□□ 0.81
PTPRO-209ENST00000543886 WDR19Q8NEZ3 1342 aa20.1■□□□□ 0.81
PTPRO-209ENST00000543886 UBE4AQ14139 1066 aa20.1■□□□□ 0.81
PTPRO-209ENST00000543886 TPTE2Q6XPS3 522 aa20.1■□□□□ 0.81
PTPRO-209ENST00000543886 PTPDC1A2A3K4 754 aa20.09■□□□□ 0.81
PTPRO-209ENST00000543886 MBD4O95243 580 aa20.09■□□□□ 0.81
PTPRO-209ENST00000543886 ARHGEF1Q92888 912 aaKnown RBP20.09■□□□□ 0.81
PTPRO-209ENST00000543886 LRP2BPQ9P2M1 347 aa20.09■□□□□ 0.81
PTPRO-209ENST00000543886 C4AP0C0L4 1744 aa20.09■□□□□ 0.81
PTPRO-209ENST00000543886 EVCP57679 992 aa20.09■□□□□ 0.81
PTPRO-209ENST00000543886 SEPT12Q8IYM1 358 aa20.09■□□□□ 0.81
PTPRO-209ENST00000543886 CELF1Q92879 486 aaKnown RBP20.09■□□□□ 0.81
PTPRO-209ENST00000543886 MINPP1Q9UNW1 487 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms