RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 TRAK1Q9UPV9 953 aa7.09□□□□□ -1.27
MDM2-229ENST00000543046 C1QTNF9BB2RNN3 333 aa7.08□□□□□ -1.28
MDM2-229ENST00000543046 C9orf172C9J069 976 aa7.08□□□□□ -1.28
MDM2-229ENST00000543046 ITGB2P05107 769 aa7.08□□□□□ -1.28
MDM2-229ENST00000543046 ERCC3P19447 782 aa7.08□□□□□ -1.28
MDM2-229ENST00000543046 PIP4K2BP78356 416 aa7.08□□□□□ -1.28
MDM2-229ENST00000543046 IKBKEQ14164 716 aa7.08□□□□□ -1.28
MDM2-229ENST00000543046 CD163Q86VB7 1156 aa7.08□□□□□ -1.28
MDM2-229ENST00000543046 KLHL23Q8NBE8 558 aa7.08□□□□□ -1.28
MDM2-229ENST00000543046 DCAF11Q8TEB1 546 aa7.08□□□□□ -1.28
MDM2-229ENST00000543046 SLC7A3Q8WY07 619 aa7.08□□□□□ -1.28
MDM2-229ENST00000543046 WNT8BQ93098 351 aa7.08□□□□□ -1.28
MDM2-229ENST00000543046 BCO2Q9BYV7 579 aa7.08□□□□□ -1.28
MDM2-229ENST00000543046 SEC31BQ9NQW1 1179 aa7.08□□□□□ -1.28
MDM2-229ENST00000543046 TMEM238LA0A1B0GVL6 79 aa7.07□□□□□ -1.28
MDM2-229ENST00000543046 TM4SF5O14894 197 aa7.07□□□□□ -1.28
MDM2-229ENST00000543046 ITPKAP23677 461 aa7.07□□□□□ -1.28
MDM2-229ENST00000543046 IGF2-ASQ6U949 168 aa7.07□□□□□ -1.28
MDM2-229ENST00000543046 LENG1Q96BZ8 264 aaPredicted RBP7.07□□□□□ -1.28
MDM2-229ENST00000543046 CLEC4MQ9H2X3 399 aaPredicted RBP7.07□□□□□ -1.28
MDM2-229ENST00000543046 OSGEPQ9NPF4 335 aa7.07□□□□□ -1.28
MDM2-229ENST00000543046 SOX1O00570 391 aaPredicted RBP7.06□□□□□ -1.28
MDM2-229ENST00000543046 PRPF40AO75400 957 aaKnown RBP7.06□□□□□ -1.28
MDM2-229ENST00000543046 ESRRAP11474 423 aaPredicted RBP7.06□□□□□ -1.28
MDM2-229ENST00000543046 CD68P34810 354 aaPredicted RBP7.06□□□□□ -1.28
MDM2-229ENST00000543046 ARL4DP49703 201 aa7.06□□□□□ -1.28
MDM2-229ENST00000543046 PTPN12Q05209 780 aaKnown RBP7.06□□□□□ -1.28
MDM2-229ENST00000543046 FOXD4L6Q3SYB3 417 aaPredicted RBP7.06□□□□□ -1.28
MDM2-229ENST00000543046 HGSNATQ68CP4 663 aa7.06□□□□□ -1.28
MDM2-229ENST00000543046 NXPE4Q6UWF7 544 aa7.06□□□□□ -1.28
MDM2-229ENST00000543046 FOXD4L3Q6VB84 417 aaPredicted RBP7.06□□□□□ -1.28
MDM2-229ENST00000543046 KLHDC7BQ96G42 594 aa7.06□□□□□ -1.28
MDM2-229ENST00000543046 ZNF576Q9H609 170 aa7.06□□□□□ -1.28
MDM2-229ENST00000543046 PPP4R2Q9NY27 417 aa7.06□□□□□ -1.28
MDM2-229ENST00000543046 USP21Q9UK80 565 aa7.06□□□□□ -1.28
MDM2-229ENST00000543046 MFAP1P55081 439 aaKnown RBP7.05□□□□□ -1.28
MDM2-229ENST00000543046 FCGRTP55899 365 aa7.05□□□□□ -1.28
MDM2-229ENST00000543046 FGD1P98174 961 aa7.05□□□□□ -1.28
MDM2-229ENST00000543046 NRG1Q02297 640 aaPredicted RBP7.05□□□□□ -1.28
MDM2-229ENST00000543046 PCDH1Q08174 1060 aa7.05□□□□□ -1.28
MDM2-229ENST00000543046 C19orf57Q0VDD7 668 aa7.05□□□□□ -1.28
MDM2-229ENST00000543046 SUZ12Q15022 739 aaKnown RBP7.05□□□□□ -1.28
MDM2-229ENST00000543046 FBXO33Q7Z6M2 555 aa7.05□□□□□ -1.28
MDM2-229ENST00000543046 KCNK4Q9NYG8 393 aa7.05□□□□□ -1.28
MDM2-229ENST00000543046 SPG7Q9UQ90 795 aa7.05□□□□□ -1.28
MDM2-229ENST00000543046 DDX3YO15523 660 aaKnown RBP7.04□□□□□ -1.28
MDM2-229ENST00000543046 ADAM11O75078 769 aa7.04□□□□□ -1.28
MDM2-229ENST00000543046 ADGRE1Q14246 886 aa7.04□□□□□ -1.28
MDM2-229ENST00000543046 MBTPS1Q14703 1052 aa7.04□□□□□ -1.28
MDM2-229ENST00000543046 ZNF423Q2M1K9 1284 aa7.04□□□□□ -1.28
MDM2-229ENST00000543046 GPAT2Q6NUI2 795 aa7.04□□□□□ -1.28
MDM2-229ENST00000543046 DTHD1Q6ZMT9 781 aa7.04□□□□□ -1.28
MDM2-229ENST00000543046 DUSP9Q99956 384 aaKnown RBP7.04□□□□□ -1.28
MDM2-229ENST00000543046 OSBPL7Q9BZF2 842 aa7.04□□□□□ -1.28
MDM2-229ENST00000543046 SRCIN1Q9C0H9 1055 aa7.04□□□□□ -1.28
MDM2-229ENST00000543046 MRPL18Q9H0U6 180 aaKnown RBP7.04□□□□□ -1.28
MDM2-229ENST00000543046 SOX17Q9H6I2 414 aaPredicted RBP7.04□□□□□ -1.28
MDM2-229ENST00000543046 GIPC1O14908 333 aa7.03□□□□□ -1.28
MDM2-229ENST00000543046 XRCC5P13010 732 aaKnown RBP7.03□□□□□ -1.28
MDM2-229ENST00000543046 NLRP12P59046 1061 aa7.03□□□□□ -1.28
MDM2-229ENST00000543046 FOXD4L4Q8WXT5 416 aaPredicted RBP7.03□□□□□ -1.28
MDM2-229ENST00000543046 RNF19AQ9NV58 838 aa7.03□□□□□ -1.28
MDM2-229ENST00000543046 WISP1O95388 367 aa7.02□□□□□ -1.29
MDM2-229ENST00000543046 B3GALT4O96024 378 aa7.02□□□□□ -1.29
MDM2-229ENST00000543046 GNA15P30679 374 aa7.02□□□□□ -1.29
MDM2-229ENST00000543046 GATA4P43694 442 aa7.02□□□□□ -1.29
MDM2-229ENST00000543046 GSTM4Q03013 218 aa7.02□□□□□ -1.29
MDM2-229ENST00000543046 RPS26P11Q5JNZ5 115 aaPredicted RBP7.02□□□□□ -1.29
MDM2-229ENST00000543046 FRMD6Q96NE9 622 aa7.02□□□□□ -1.29
MDM2-229ENST00000543046 SPOCK3Q9BQ16 436 aa7.02□□□□□ -1.29
MDM2-229ENST00000543046 C12orf49Q9H741 205 aa7.02□□□□□ -1.29
MDM2-229ENST00000543046 ZFYVE1Q9HBF4 777 aa7.02□□□□□ -1.29
MDM2-229ENST00000543046 F8W735 103 aaPredicted RBP7.01□□□□□ -1.29
MDM2-229ENST00000543046 MSTNO14793 375 aa7.01□□□□□ -1.29
MDM2-229ENST00000543046 IGHA1P01876 353 aa7.01□□□□□ -1.29
MDM2-229ENST00000543046 PROCP04070 461 aa7.01□□□□□ -1.29
MDM2-229ENST00000543046 GSTT1P30711 240 aa7.01□□□□□ -1.29
MDM2-229ENST00000543046 TAGLNQ01995 201 aaKnown RBP7.01□□□□□ -1.29
MDM2-229ENST00000543046 FAAP100Q0VG06 881 aa7.01□□□□□ -1.29
MDM2-229ENST00000543046 DUOXA2Q1HG44 320 aa7.01□□□□□ -1.29
MDM2-229ENST00000543046 ACAD11Q709F0 780 aa7.01□□□□□ -1.29
MDM2-229ENST00000543046 TXNRD3Q86VQ6 643 aa7.01□□□□□ -1.29
MDM2-229ENST00000543046 TMEM130Q8N3G9 435 aa7.01□□□□□ -1.29
MDM2-229ENST00000543046 UBASH3BQ8TF42 649 aa7.01□□□□□ -1.29
MDM2-229ENST00000543046 WFDC12Q8WWY7 111 aa7.01□□□□□ -1.29
MDM2-229ENST00000543046 FAM8A1Q9UBU6 413 aa7.01□□□□□ -1.29
MDM2-229ENST00000543046 PARP2Q9UGN5 583 aa7.01□□□□□ -1.29
MDM2-229ENST00000543046 AKAP2Q9Y2D5 859 aa7.01□□□□□ -1.29
MDM2-229ENST00000543046 ALX3O95076 343 aa7□□□□□ -1.29
MDM2-229ENST00000543046 NOS3P29474 1203 aa7□□□□□ -1.29
MDM2-229ENST00000543046 IREB2P48200 963 aaKnown RBP7□□□□□ -1.29
MDM2-229ENST00000543046 ZC3HAV1Q7Z2W4 902 aaKnown RBP7□□□□□ -1.29
MDM2-229ENST00000543046 AGGF1Q8N302 714 aaeCLIP7□□□□□ -1.29
MDM2-229ENST00000543046 C3orf58Q8NDZ4 430 aa7□□□□□ -1.29
MDM2-229ENST00000543046 BCL2L13Q9BXK5 485 aa7□□□□□ -1.29
MDM2-229ENST00000543046 AKTIPQ9H8T0 292 aa7□□□□□ -1.29
MDM2-229ENST00000543046 EIF4EBP3O60516 100 aaPredicted RBP6.99□□□□□ -1.29
MDM2-229ENST00000543046 USP17L7P0C7H9 530 aa6.99□□□□□ -1.29
MDM2-229ENST00000543046 EIF4BP23588 611 aaKnown RBP6.99□□□□□ -1.29
MDM2-229ENST00000543046 ZNF157P51786 506 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms