RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ANKRD30BQ9BXX2 1392 aa7.71□□□□□ -1.17
CPSF7-220ENST00000541963 SLC35F4A4IF30 521 aa7.71□□□□□ -1.18
CPSF7-220ENST00000541963 GPR182O15218 404 aa7.71□□□□□ -1.18
CPSF7-220ENST00000541963 LDHBP07195 334 aaKnown RBP7.71□□□□□ -1.18
CPSF7-220ENST00000541963 ATF3P18847 181 aa7.71□□□□□ -1.18
CPSF7-220ENST00000541963 TYRO3Q06418 890 aa7.71□□□□□ -1.18
CPSF7-220ENST00000541963 FMR1Q06787 632 aaKnown RBP eCLIP7.71□□□□□ -1.18
CPSF7-220ENST00000541963 ALG1LQ6GMV1 187 aa7.71□□□□□ -1.18
CPSF7-220ENST00000541963 PDE12Q6L8Q7 609 aaKnown RBP7.71□□□□□ -1.18
CPSF7-220ENST00000541963 FOXR1Q6PIV2 292 aa7.71□□□□□ -1.18
CPSF7-220ENST00000541963 FBXO33Q7Z6M2 555 aa7.71□□□□□ -1.18
CPSF7-220ENST00000541963 TRIM47Q96LD4 638 aa7.71□□□□□ -1.18
CPSF7-220ENST00000541963 ZCCHC2Q9C0B9 1178 aaKnown RBP7.71□□□□□ -1.18
CPSF7-220ENST00000541963 GGNBP2Q9H3C7 697 aa7.71□□□□□ -1.18
CPSF7-220ENST00000541963 C19orf44Q9H6X5 657 aa7.71□□□□□ -1.18
CPSF7-220ENST00000541963 DACH1Q9UI36 760 aa7.71□□□□□ -1.18
CPSF7-220ENST00000541963 KCNH4Q9UQ05 1017 aa7.71□□□□□ -1.18
CPSF7-220ENST00000541963 NEXMIFQ5QGS0 1516 aa7.71□□□□□ -1.18
CPSF7-220ENST00000541963 SENP3-EIF4A1A0A087X0R7 540 aa7.7□□□□□ -1.18
CPSF7-220ENST00000541963 KHNYNO15037 678 aaKnown RBP7.7□□□□□ -1.18
CPSF7-220ENST00000541963 XYLBO75191 536 aa7.7□□□□□ -1.18
CPSF7-220ENST00000541963 CCDC155Q8N6L0 562 aa7.7□□□□□ -1.18
CPSF7-220ENST00000541963 MRRFQ96E11 262 aaKnown RBP7.7□□□□□ -1.18
CPSF7-220ENST00000541963 KLRG1Q96E93 195 aa7.7□□□□□ -1.18
CPSF7-220ENST00000541963 USP20Q9Y2K6 914 aa7.7□□□□□ -1.18
CPSF7-220ENST00000541963 NWD1Q149M9 1564 aa7.7□□□□□ -1.18
CPSF7-220ENST00000541963 SETBP1Q9Y6X0 1596 aa7.7□□□□□ -1.18
CPSF7-220ENST00000541963 PNMA6FA0A0J9YX94 578 aa7.69□□□□□ -1.18
CPSF7-220ENST00000541963 PRPF40AO75400 957 aaKnown RBP7.69□□□□□ -1.18
CPSF7-220ENST00000541963 HSPA1LP34931 641 aa7.69□□□□□ -1.18
CPSF7-220ENST00000541963 TTC39BQ5VTQ0 682 aaPredicted RBP7.69□□□□□ -1.18
CPSF7-220ENST00000541963 XKR5Q6UX68 686 aa7.69□□□□□ -1.18
CPSF7-220ENST00000541963 Q6ZNB5 142 aa7.69□□□□□ -1.18
CPSF7-220ENST00000541963 TRIM22Q8IYM9 498 aa7.69□□□□□ -1.18
CPSF7-220ENST00000541963 PNMA5Q96PV4 448 aa7.69□□□□□ -1.18
CPSF7-220ENST00000541963 CSRNP1Q96S65 589 aa7.69□□□□□ -1.18
CPSF7-220ENST00000541963 DNAJC25Q9H1X3 360 aa7.69□□□□□ -1.18
CPSF7-220ENST00000541963 ELP3Q9H9T3 547 aa7.69□□□□□ -1.18
CPSF7-220ENST00000541963 MRS2Q9HD23 443 aa7.69□□□□□ -1.18
CPSF7-220ENST00000541963 PHF24Q9UPV7 400 aa7.69□□□□□ -1.18
CPSF7-220ENST00000541963 METP08581 1390 aa7.69□□□□□ -1.18
CPSF7-220ENST00000541963 SPATA31E1Q6ZUB1 1445 aa7.69□□□□□ -1.18
CPSF7-220ENST00000541963 CPNE3O75131 537 aaKnown RBP7.68□□□□□ -1.18
CPSF7-220ENST00000541963 FAM157BP0CG42 384 aa7.68□□□□□ -1.18
CPSF7-220ENST00000541963 LAMC2Q13753 1193 aa7.68□□□□□ -1.18
CPSF7-220ENST00000541963 ENOX2Q16206 610 aaKnown RBP7.68□□□□□ -1.18
CPSF7-220ENST00000541963 SNX29Q8TEQ0 813 aa7.68□□□□□ -1.18
CPSF7-220ENST00000541963 PMEPA1Q969W9 287 aa7.68□□□□□ -1.18
CPSF7-220ENST00000541963 GMPR2Q9P2T1 348 aaKnown RBP7.68□□□□□ -1.18
CPSF7-220ENST00000541963 ADGRF5Q8IZF2 1346 aa7.68□□□□□ -1.18
CPSF7-220ENST00000541963 FAM135BQ49AJ0 1406 aa7.68□□□□□ -1.18
CPSF7-220ENST00000541963 PPLO60437 1756 aa7.67□□□□□ -1.18
CPSF7-220ENST00000541963 XIRP1Q702N8 1843 aaKnown RBP7.67□□□□□ -1.18
CPSF7-220ENST00000541963 A6NHS1 94 aa7.67□□□□□ -1.18
CPSF7-220ENST00000541963 C11orf95C9JLR9 678 aaPredicted RBP7.67□□□□□ -1.18
CPSF7-220ENST00000541963 PHACTR2O75167 634 aa7.67□□□□□ -1.18
CPSF7-220ENST00000541963 KCNQ4P56696 695 aa7.67□□□□□ -1.18
CPSF7-220ENST00000541963 NEUROD1Q13562 356 aa7.67□□□□□ -1.18
CPSF7-220ENST00000541963 NLRP13Q86W25 1043 aa7.67□□□□□ -1.18
CPSF7-220ENST00000541963 FBF1Q8TES7 1133 aa7.67□□□□□ -1.18
CPSF7-220ENST00000541963 TRERF1Q96PN7 1200 aa7.67□□□□□ -1.18
CPSF7-220ENST00000541963 KCNMB2Q9Y691 235 aa7.67□□□□□ -1.18
CPSF7-220ENST00000541963 PTPRUQ92729 1446 aa7.67□□□□□ -1.18
CPSF7-220ENST00000541963 ALKQ9UM73 1620 aa7.67□□□□□ -1.18
CPSF7-220ENST00000541963 DCDC2BA2VCK2 349 aa7.66□□□□□ -1.18
CPSF7-220ENST00000541963 UNCXA6NJT0 531 aa7.66□□□□□ -1.18
CPSF7-220ENST00000541963 EIF1AYO14602 144 aaKnown RBP7.66□□□□□ -1.18
CPSF7-220ENST00000541963 TNFRSF21O75509 655 aa7.66□□□□□ -1.18
CPSF7-220ENST00000541963 EGFRP00533 1210 aa7.66□□□□□ -1.18
CPSF7-220ENST00000541963 IGHA2P01877 340 aa7.66□□□□□ -1.18
CPSF7-220ENST00000541963 ITGA6P23229 1130 aa7.66□□□□□ -1.18
CPSF7-220ENST00000541963 PSMD2Q13200 908 aa7.66□□□□□ -1.18
CPSF7-220ENST00000541963 CCINQ13939 588 aa7.66□□□□□ -1.18
CPSF7-220ENST00000541963 DBN1Q16643 649 aa7.66□□□□□ -1.18
CPSF7-220ENST00000541963 DCAF11Q8TEB1 546 aa7.66□□□□□ -1.18
CPSF7-220ENST00000541963 FRMD6Q96NE9 622 aa7.66□□□□□ -1.18
CPSF7-220ENST00000541963 C14orf93Q9H972 538 aaKnown RBP7.66□□□□□ -1.18
CPSF7-220ENST00000541963 EFCC1Q9HA90 598 aa7.66□□□□□ -1.18
CPSF7-220ENST00000541963 MARK1Q9P0L2 795 aa7.66□□□□□ -1.18
CPSF7-220ENST00000541963 NRXN3Q9Y4C0 1643 aa7.66□□□□□ -1.18
CPSF7-220ENST00000541963 MAPTP10636 758 aaKnown RBP7.65□□□□□ -1.18
CPSF7-220ENST00000541963 TAGLNQ01995 201 aaKnown RBP7.65□□□□□ -1.18
CPSF7-220ENST00000541963 TNP2Q05952 138 aa7.65□□□□□ -1.18
CPSF7-220ENST00000541963 SFSWAPQ12872 951 aaKnown RBP7.65□□□□□ -1.18
CPSF7-220ENST00000541963 ORC1Q13415 861 aa7.65□□□□□ -1.18
CPSF7-220ENST00000541963 DHX57Q6P158 1386 aaKnown RBP7.65□□□□□ -1.18
CPSF7-220ENST00000541963 DUSP9Q99956 384 aaKnown RBP7.65□□□□□ -1.18
CPSF7-220ENST00000541963 NLRP2Q9NX02 1062 aa7.65□□□□□ -1.18
CPSF7-220ENST00000541963 ABI2Q9NYB9 513 aaPredicted RBP7.65□□□□□ -1.18
CPSF7-220ENST00000541963 STK26Q9P289 416 aa7.65□□□□□ -1.18
CPSF7-220ENST00000541963 ATXN7L1Q9ULK2 861 aaPredicted RBP7.65□□□□□ -1.18
CPSF7-220ENST00000541963 DISP3Q9P2K9 1392 aa7.64□□□□□ -1.19
CPSF7-220ENST00000541963 TRIP4Q15650 581 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-220ENST00000541963 TMEM132EQ6IEE7 984 aa7.64□□□□□ -1.19
CPSF7-220ENST00000541963 GTPBP3Q969Y2 492 aaKnown RBP7.64□□□□□ -1.19
CPSF7-220ENST00000541963 ZFYVE28Q9HCC9 887 aa7.64□□□□□ -1.19
CPSF7-220ENST00000541963 PARP2Q9UGN5 583 aa7.64□□□□□ -1.19
CPSF7-220ENST00000541963 SPG7Q9UQ90 795 aa7.64□□□□□ -1.19
CPSF7-220ENST00000541963 PIK3C2GO75747 1445 aa7.63□□□□□ -1.19
CPSF7-220ENST00000541963 DCCP43146 1447 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms