RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 ANKRD36CQ5JPF3 1778 aa11.52□□□□□ -0.57
TRAPPC1-202ENST00000540486 KDM3BQ7LBC6 1761 aa11.52□□□□□ -0.57
TRAPPC1-202ENST00000540486 USP17L3A6NCW0 530 aa11.52□□□□□ -0.57
TRAPPC1-202ENST00000540486 USP17L4A6NCW7 530 aa11.52□□□□□ -0.57
TRAPPC1-202ENST00000540486 WNT10BO00744 389 aa11.52□□□□□ -0.57
TRAPPC1-202ENST00000540486 MYCP01106 439 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC1-202ENST00000540486 GNRH1P01148 92 aa11.52□□□□□ -0.57
TRAPPC1-202ENST00000540486 NEFMP07197 916 aa11.52□□□□□ -0.57
TRAPPC1-202ENST00000540486 TMPOP42166 694 aaKnown RBP11.52□□□□□ -0.57
TRAPPC1-202ENST00000540486 SF3B3Q15393 1217 aaKnown RBP11.52□□□□□ -0.57
TRAPPC1-202ENST00000540486 IER5LQ5T953 404 aa11.52□□□□□ -0.57
TRAPPC1-202ENST00000540486 USP17L1Q7RTZ2 530 aa11.52□□□□□ -0.57
TRAPPC1-202ENST00000540486 PODNQ7Z5L7 613 aa11.52□□□□□ -0.57
TRAPPC1-202ENST00000540486 UBE2Q1Q7Z7E8 422 aa11.52□□□□□ -0.57
TRAPPC1-202ENST00000540486 APOBEC3FQ8IUX4 373 aaKnown RBP11.52□□□□□ -0.57
TRAPPC1-202ENST00000540486 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRAPPC1-202ENST00000540486 CELF1Q92879 486 aaKnown RBP11.52□□□□□ -0.57
TRAPPC1-202ENST00000540486 RUNDC1Q96C34 613 aa11.52□□□□□ -0.57
TRAPPC1-202ENST00000540486 PPP1R12BO60237 982 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC1-202ENST00000540486 PRMT2P55345 433 aa11.51□□□□□ -0.57
TRAPPC1-202ENST00000540486 RIPK4P57078 832 aa11.51□□□□□ -0.57
TRAPPC1-202ENST00000540486 SH3TC2Q8TF17 1288 aa11.51□□□□□ -0.57
TRAPPC1-202ENST00000540486 SHISA4Q96DD7 197 aa11.51□□□□□ -0.57
TRAPPC1-202ENST00000540486 THUMPD2Q9BTF0 503 aaKnown RBP11.51□□□□□ -0.57
TRAPPC1-202ENST00000540486 MTMR10Q9NXD2 777 aa11.51□□□□□ -0.57
TRAPPC1-202ENST00000540486 MIS18AQ9NYP9 233 aa11.51□□□□□ -0.57
TRAPPC1-202ENST00000540486 LRRC37AA6NMS7 1700 aa11.51□□□□□ -0.57
TRAPPC1-202ENST00000540486 DDX60Q8IY21 1712 aaKnown RBP11.5□□□□□ -0.57
TRAPPC1-202ENST00000540486 BMP8BP34820 402 aa11.5□□□□□ -0.57
TRAPPC1-202ENST00000540486 GJA8P48165 433 aa11.5□□□□□ -0.57
TRAPPC1-202ENST00000540486 EIF4A1P60842 406 aaKnown RBP11.5□□□□□ -0.57
TRAPPC1-202ENST00000540486 RPS8P62241 208 aaKnown RBP11.5□□□□□ -0.57
TRAPPC1-202ENST00000540486 PTPN18Q99952 460 aa11.5□□□□□ -0.57
TRAPPC1-202ENST00000540486 ZFYVE28Q9HCC9 887 aa11.5□□□□□ -0.57
TRAPPC1-202ENST00000540486 MRS2Q9HD23 443 aa11.5□□□□□ -0.57
TRAPPC1-202ENST00000540486 GGA1Q9UJY5 639 aa11.5□□□□□ -0.57
TRAPPC1-202ENST00000540486 MAPK8IP3Q9UPT6 1336 aa11.5□□□□□ -0.57
TRAPPC1-202ENST00000540486 UFL1O94874 794 aa11.49□□□□□ -0.57
TRAPPC1-202ENST00000540486 CAPN2P17655 700 aa11.49□□□□□ -0.57
TRAPPC1-202ENST00000540486 GOLGA2Q08379 1002 aa11.49□□□□□ -0.57
TRAPPC1-202ENST00000540486 KIF22Q14807 665 aa11.49□□□□□ -0.57
TRAPPC1-202ENST00000540486 NEUROD2Q15784 382 aa11.49□□□□□ -0.57
TRAPPC1-202ENST00000540486 LRP10Q7Z4F1 713 aa11.49□□□□□ -0.57
TRAPPC1-202ENST00000540486 SLC39A7Q92504 469 aa11.49□□□□□ -0.57
TRAPPC1-202ENST00000540486 ANKIB1Q9P2G1 1089 aa11.49□□□□□ -0.57
TRAPPC1-202ENST00000540486 STAP2Q9UGK3 403 aa11.49□□□□□ -0.57
TRAPPC1-202ENST00000540486 SCN9AQ15858 1988 aa11.48□□□□□ -0.57
TRAPPC1-202ENST00000540486 APAF1O14727 1248 aa11.48□□□□□ -0.57
TRAPPC1-202ENST00000540486 EVI5O60447 810 aa11.48□□□□□ -0.57
TRAPPC1-202ENST00000540486 GJB1P08034 283 aa11.48□□□□□ -0.57
TRAPPC1-202ENST00000540486 C7P10643 843 aa11.48□□□□□ -0.57
TRAPPC1-202ENST00000540486 CLMNQ96JQ2 1002 aa11.48□□□□□ -0.57
TRAPPC1-202ENST00000540486 MYO3BQ8WXR4 1341 aa11.48□□□□□ -0.57
TRAPPC1-202ENST00000540486 DLG5Q8TDM6 1919 aa11.47□□□□□ -0.57
TRAPPC1-202ENST00000540486 LAMB4A4D0S4 1761 aa11.47□□□□□ -0.57
TRAPPC1-202ENST00000540486 WDHD1O75717 1129 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC1-202ENST00000540486 MTFR1Q15390 333 aa11.47□□□□□ -0.57
TRAPPC1-202ENST00000540486 LRIT3Q3SXY7 679 aa11.47□□□□□ -0.57
TRAPPC1-202ENST00000540486 Q7L0L9 218 aa11.47□□□□□ -0.57
TRAPPC1-202ENST00000540486 DEFB129Q9H1M3 183 aa11.47□□□□□ -0.57
TRAPPC1-202ENST00000540486 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC1-202ENST00000540486 VCANP13611 3396 aa11.47□□□□□ -0.57
TRAPPC1-202ENST00000540486 LAMB2P55268 1798 aa11.46□□□□□ -0.57
TRAPPC1-202ENST00000540486 COL1A1P02452 1464 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC1-202ENST00000540486 GJA5P36382 358 aa11.46□□□□□ -0.57
TRAPPC1-202ENST00000540486 IREB2P48200 963 aaKnown RBP11.46□□□□□ -0.57
TRAPPC1-202ENST00000540486 PDIA6Q15084 440 aa11.46□□□□□ -0.57
TRAPPC1-202ENST00000540486 TAF1CQ15572 869 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC1-202ENST00000540486 SUPT20HL1Q3ZLR7 823 aa11.46□□□□□ -0.57
TRAPPC1-202ENST00000540486 ANKRD13AQ8IZ07 590 aa11.46□□□□□ -0.57
TRAPPC1-202ENST00000540486 EFCAB3Q8N7B9 438 aa11.46□□□□□ -0.57
TRAPPC1-202ENST00000540486 FZD1Q9UP38 647 aa11.46□□□□□ -0.57
TRAPPC1-202ENST00000540486 PPP2R3BQ9Y5P8 575 aa11.46□□□□□ -0.57
TRAPPC1-202ENST00000540486 SASH1O94885 1247 aa11.45□□□□□ -0.58
TRAPPC1-202ENST00000540486 LACTBP83111 547 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC1-202ENST00000540486 DACT2Q5SW24 774 aa11.45□□□□□ -0.58
TRAPPC1-202ENST00000540486 STRIP1Q5VSL9 837 aa11.45□□□□□ -0.58
TRAPPC1-202ENST00000540486 MS4A4AQ96JQ5 239 aa11.45□□□□□ -0.58
TRAPPC1-202ENST00000540486 GDF15Q99988 308 aa11.45□□□□□ -0.58
TRAPPC1-202ENST00000540486 TAF1P21675 1872 aa11.44□□□□□ -0.58
TRAPPC1-202ENST00000540486 FARP2O94887 1054 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC1-202ENST00000540486 COL9A1P20849 921 aa11.44□□□□□ -0.58
TRAPPC1-202ENST00000540486 ATP2B4P23634 1241 aa11.44□□□□□ -0.58
TRAPPC1-202ENST00000540486 HOXD10P28358 340 aa11.44□□□□□ -0.58
TRAPPC1-202ENST00000540486 IRX5P78411 483 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC1-202ENST00000540486 DIEXFQ68CQ4 756 aaKnown RBP11.44□□□□□ -0.58
TRAPPC1-202ENST00000540486 COPS6Q7L5N1 327 aa11.44□□□□□ -0.58
TRAPPC1-202ENST00000540486 FAM9BQ8IZU0 186 aa11.44□□□□□ -0.58
TRAPPC1-202ENST00000540486 HELBQ8NG08 1087 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC1-202ENST00000540486 ZBED3Q96IU2 234 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC1-202ENST00000540486 RNF208Q9H0X6 261 aa11.44□□□□□ -0.58
TRAPPC1-202ENST00000540486 ZNF646O15015 1829 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC1-202ENST00000540486 XDHP47989 1333 aa11.43□□□□□ -0.58
TRAPPC1-202ENST00000540486 TLR2O60603 784 aa11.43□□□□□ -0.58
TRAPPC1-202ENST00000540486 USP2O75604 605 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC1-202ENST00000540486 CCL5P13501 91 aa11.43□□□□□ -0.58
TRAPPC1-202ENST00000540486 GRK4P32298 578 aa11.43□□□□□ -0.58
TRAPPC1-202ENST00000540486 GTF2A2P52657 109 aa11.43□□□□□ -0.58
TRAPPC1-202ENST00000540486 BBXQ8WY36 941 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC1-202ENST00000540486 FAM89AQ96GI7 184 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms