RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 SEC62Q99442 399 aaKnown RBP12.05□□□□□ -0.48
SPARC-209ENST00000539687 NDUFB9Q9Y6M9 179 aa12.05□□□□□ -0.48
SPARC-209ENST00000539687 MYH7P12883 1935 aa12.04□□□□□ -0.48
SPARC-209ENST00000539687 C4BP0C0L5 1744 aa12.04□□□□□ -0.48
SPARC-209ENST00000539687 FAM177BA6PVY3 158 aa12.04□□□□□ -0.48
SPARC-209ENST00000539687 RFC4P35249 363 aa12.04□□□□□ -0.48
SPARC-209ENST00000539687 HMGN5P82970 282 aaKnown RBP12.04□□□□□ -0.48
SPARC-209ENST00000539687 CHRNDQ07001 517 aa12.04□□□□□ -0.48
SPARC-209ENST00000539687 ME3Q16798 604 aa12.04□□□□□ -0.48
SPARC-209ENST00000539687 ERFEQ4G0M1 354 aa12.04□□□□□ -0.48
SPARC-209ENST00000539687 SLC9C2Q5TAH2 1124 aa12.04□□□□□ -0.48
SPARC-209ENST00000539687 CCDC83Q8IWF9 413 aa12.04□□□□□ -0.48
SPARC-209ENST00000539687 OSBP2Q969R2 916 aa12.04□□□□□ -0.48
SPARC-209ENST00000539687 TPCN1Q9ULQ1 816 aa12.04□□□□□ -0.48
SPARC-209ENST00000539687 ZDHHC9Q9Y397 364 aa12.04□□□□□ -0.48
SPARC-209ENST00000539687 PDS5AQ29RF7 1337 aaKnown RBP12.04□□□□□ -0.48
SPARC-209ENST00000539687 M0R2C6 588 aa12.03□□□□□ -0.48
SPARC-209ENST00000539687 ZNF213O14771 459 aa12.03□□□□□ -0.48
SPARC-209ENST00000539687 GPAA1O43292 621 aa12.03□□□□□ -0.48
SPARC-209ENST00000539687 DHX16O60231 1041 aaKnown RBP12.03□□□□□ -0.48
SPARC-209ENST00000539687 GJB2P29033 226 aa12.03□□□□□ -0.48
SPARC-209ENST00000539687 PHKA1P46020 1223 aa12.03□□□□□ -0.48
SPARC-209ENST00000539687 MRE11P49959 708 aa12.03□□□□□ -0.48
SPARC-209ENST00000539687 TRDNQ13061 729 aa12.03□□□□□ -0.48
SPARC-209ENST00000539687 SCARF1Q14162 830 aa12.03□□□□□ -0.48
SPARC-209ENST00000539687 ALX1Q15699 326 aa12.03□□□□□ -0.48
SPARC-209ENST00000539687 TBC1D9BQ66K14 1250 aa12.03□□□□□ -0.48
SPARC-209ENST00000539687 RALYLQ86SE5 291 aaKnown RBP12.03□□□□□ -0.48
SPARC-209ENST00000539687 TMEM87AQ8NBN3 555 aa12.03□□□□□ -0.48
SPARC-209ENST00000539687 RGS22Q8NE09 1264 aa12.03□□□□□ -0.48
SPARC-209ENST00000539687 NCOA7Q8NI08 942 aa12.03□□□□□ -0.48
SPARC-209ENST00000539687 AIDAQ96BJ3 306 aa12.03□□□□□ -0.48
SPARC-209ENST00000539687 AGXT2Q9BYV1 514 aa12.03□□□□□ -0.48
SPARC-209ENST00000539687 NACAP1Q9BZK3 213 aa12.03□□□□□ -0.48
SPARC-209ENST00000539687 SBF2Q86WG5 1849 aa12.02□□□□□ -0.48
SPARC-209ENST00000539687 TAF1LQ8IZX4 1826 aa12.02□□□□□ -0.48
SPARC-209ENST00000539687 PSDA5PKW4 1024 aaPredicted RBP12.02□□□□□ -0.49
SPARC-209ENST00000539687 E7EWF7 191 aa12.02□□□□□ -0.49
SPARC-209ENST00000539687 NPHP1O15259 732 aa12.02□□□□□ -0.49
SPARC-209ENST00000539687 IDH1O75874 414 aaKnown RBP12.02□□□□□ -0.49
SPARC-209ENST00000539687 PHF14O94880 888 aa12.02□□□□□ -0.49
SPARC-209ENST00000539687 F13A1P00488 732 aa12.02□□□□□ -0.49
SPARC-209ENST00000539687 PDE6AP16499 860 aa12.02□□□□□ -0.49
SPARC-209ENST00000539687 SYT1P21579 422 aa12.02□□□□□ -0.49
SPARC-209ENST00000539687 MCM5P33992 734 aa12.02□□□□□ -0.49
SPARC-209ENST00000539687 PKP1Q13835 747 aa12.02□□□□□ -0.49
SPARC-209ENST00000539687 TOB2Q14106 344 aaPredicted RBP12.02□□□□□ -0.49
SPARC-209ENST00000539687 Q6ZUG5 572 aa12.02□□□□□ -0.49
SPARC-209ENST00000539687 GTF3C6Q969F1 213 aa12.02□□□□□ -0.49
SPARC-209ENST00000539687 ZNF274Q96GC6 653 aaPredicted RBP12.02□□□□□ -0.49
SPARC-209ENST00000539687 SEC31BQ9NQW1 1179 aa12.02□□□□□ -0.49
SPARC-209ENST00000539687 LMBRD1Q9NUN5 540 aa12.02□□□□□ -0.49
SPARC-209ENST00000539687 DENND2AQ9ULE3 1009 aa12.02□□□□□ -0.49
SPARC-209ENST00000539687 ZNF804BA4D1E1 1349 aa12.02□□□□□ -0.49
SPARC-209ENST00000539687 PFKFB2O60825 505 aa12.01□□□□□ -0.49
SPARC-209ENST00000539687 CPA1P15085 419 aa12.01□□□□□ -0.49
SPARC-209ENST00000539687 RPS8P62241 208 aaKnown RBP12.01□□□□□ -0.49
SPARC-209ENST00000539687 EXOSC10Q01780 885 aaKnown RBP12.01□□□□□ -0.49
SPARC-209ENST00000539687 LARP1BQ659C4 914 aaKnown RBP12.01□□□□□ -0.49
SPARC-209ENST00000539687 VPS37DQ86XT2 251 aa12.01□□□□□ -0.49
SPARC-209ENST00000539687 ARHGEF1Q92888 912 aaKnown RBP12.01□□□□□ -0.49
SPARC-209ENST00000539687 BCL2L12Q9HB09 334 aa12.01□□□□□ -0.49
SPARC-209ENST00000539687 PNPLA7Q6ZV29 1317 aa12.01□□□□□ -0.49
SPARC-209ENST00000539687 ZNF532Q9HCE3 1301 aa12.01□□□□□ -0.49
SPARC-209ENST00000539687 AKAP11Q9UKA4 1901 aa12.01□□□□□ -0.49
SPARC-209ENST00000539687 DOCK2Q92608 1830 aa12□□□□□ -0.49
SPARC-209ENST00000539687 FSD2A1L4K1 749 aa12□□□□□ -0.49
SPARC-209ENST00000539687 PRPF40AO75400 957 aaKnown RBP12□□□□□ -0.49
SPARC-209ENST00000539687 FGAP02671 866 aa12□□□□□ -0.49
SPARC-209ENST00000539687 NT5C2P49902 561 aa12□□□□□ -0.49
SPARC-209ENST00000539687 EVCP57679 992 aa12□□□□□ -0.49
SPARC-209ENST00000539687 RASGRF1Q13972 1273 aa12□□□□□ -0.49
SPARC-209ENST00000539687 KRT27Q7Z3Y8 459 aa12□□□□□ -0.49
SPARC-209ENST00000539687 FAM184AQ8NB25 1140 aa12□□□□□ -0.49
SPARC-209ENST00000539687 MTA3Q9BTC8 594 aa12□□□□□ -0.49
SPARC-209ENST00000539687 PUS7LQ9H0K6 701 aaKnown RBP12□□□□□ -0.49
SPARC-209ENST00000539687 CNNM2Q9H8M5 875 aa12□□□□□ -0.49
SPARC-209ENST00000539687 PIH1D3Q9NQM4 214 aaKnown RBP12□□□□□ -0.49
SPARC-209ENST00000539687 TCRBV5S4A2TA0A5A2 114 aa11.99□□□□□ -0.49
SPARC-209ENST00000539687 PATL2C9JE40 543 aaKnown RBP11.99□□□□□ -0.49
SPARC-209ENST00000539687 LARGE1O95461 756 aa11.99□□□□□ -0.49
SPARC-209ENST00000539687 ZNF445P59923 1031 aa11.99□□□□□ -0.49
SPARC-209ENST00000539687 BICDL1Q6ZP65 573 aa11.99□□□□□ -0.49
SPARC-209ENST00000539687 HELBQ8NG08 1087 aaPredicted RBP11.99□□□□□ -0.49
SPARC-209ENST00000539687 BRF1Q92994 677 aa11.99□□□□□ -0.49
SPARC-209ENST00000539687 TMEM87BQ96K49 555 aa11.99□□□□□ -0.49
SPARC-209ENST00000539687 RNF41Q9H4P4 317 aaPredicted RBP11.99□□□□□ -0.49
SPARC-209ENST00000539687 ZSCAN16Q9H4T2 348 aaPredicted RBP11.99□□□□□ -0.49
SPARC-209ENST00000539687 LRP2BPQ9P2M1 347 aa11.99□□□□□ -0.49
SPARC-209ENST00000539687 MTMR6Q9Y217 621 aa11.99□□□□□ -0.49
SPARC-209ENST00000539687 C4AP0C0L4 1744 aa11.98□□□□□ -0.49
SPARC-209ENST00000539687 LETM1O95202 739 aaPredicted RBP11.98□□□□□ -0.49
SPARC-209ENST00000539687 APPP05067 770 aa11.98□□□□□ -0.49
SPARC-209ENST00000539687 PCP11498 1178 aaKnown RBP11.98□□□□□ -0.49
SPARC-209ENST00000539687 ST5P78524 1137 aa11.98□□□□□ -0.49
SPARC-209ENST00000539687 STOX1Q6ZVD7 989 aa11.98□□□□□ -0.49
SPARC-209ENST00000539687 MAGEB6Q8N7X4 407 aa11.98□□□□□ -0.49
SPARC-209ENST00000539687 CNBD1Q8NA66 436 aa11.98□□□□□ -0.49
SPARC-209ENST00000539687 ANP32BQ92688 251 aaKnown RBP11.98□□□□□ -0.49
SPARC-209ENST00000539687 STRBPQ96SI9 672 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms