RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	DKC1	O60832	514 aa	Known RBP eCLIP	10.16	□□□□□ -0.78
ECHDC2-222	ENST00000539680	POLD1	P28340	1107 aa		10.16	□□□□□ -0.78
ECHDC2-222	ENST00000539680	USP48	Q86UV5	1035 aa		10.16	□□□□□ -0.78
ECHDC2-222	ENST00000539680	MAST3	O60307	1309 aa		10.16	□□□□□ -0.78
ECHDC2-222	ENST00000539680	SKIL	P12757	684 aa		10.16	□□□□□ -0.78
ECHDC2-222	ENST00000539680	VAV2	P52735	878 aa		10.16	□□□□□ -0.78
ECHDC2-222	ENST00000539680	NMI	Q13287	307 aa	Predicted RBP	10.16	□□□□□ -0.78
ECHDC2-222	ENST00000539680	CCDC6	Q16204	474 aa		10.16	□□□□□ -0.78
ECHDC2-222	ENST00000539680	MAP7D1	Q3KQU3	841 aa		10.16	□□□□□ -0.78
ECHDC2-222	ENST00000539680	SYT1	P21579	422 aa		10.16	□□□□□ -0.78
ECHDC2-222	ENST00000539680	CCDC50	Q8IVM0	306 aa		10.16	□□□□□ -0.78
ECHDC2-222	ENST00000539680	CCDC65	Q8IXS2	484 aa		10.16	□□□□□ -0.78
ECHDC2-222	ENST00000539680	GABPB2	Q8TAK5	448 aa	Predicted RBP	10.16	□□□□□ -0.78
ECHDC2-222	ENST00000539680	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.16	□□□□□ -0.78
ECHDC2-222	ENST00000539680	MAK16	Q9BXY0	300 aa	Known RBP	10.16	□□□□□ -0.78
ECHDC2-222	ENST00000539680	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	10.16	□□□□□ -0.78
ECHDC2-222	ENST00000539680	CALU	O43852	315 aa	Predicted RBP	10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	NOL3	O60936	208 aa	Known RBP	10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	EEF2	P13639	858 aa	Known RBP	10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	PLCD1	P51178	756 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	HS1BP3	Q53T59	392 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	SLC9C2	Q5TAH2	1124 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	TPTE2	Q6XPS3	522 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	PANK2	Q9BZ23	570 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	CNPY2	Q9Y2B0	182 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	PARP1	P09874	1014 aa	Known RBP	10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	IL2RB	P14784	551 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	ARFGAP2	Q8N6H7	521 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	ODF2L	Q9ULJ1	636 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	EXOC7	Q9UPT5	735 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	PLCH2	O75038	1416 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	TOM1	O60784	492 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	UBXN1	Q04323	297 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	AOPEP	Q8N6M6	819 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	HOOK2	Q96ED9	719 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	FRMD4B	Q9Y2L6	1034 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	A2M	P01023	1474 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	AOX1	Q06278	1338 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	EPB41	P11171	864 aa	Known RBP	10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	PICALM	Q13492	652 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	DTHD1	Q6ZMT9	781 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	RUFY3	Q7L099	469 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	CNGA4	Q8IV77	575 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	INTS4	Q96HW7	963 aa	Known RBP	10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	CCDC42	Q96M95	316 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	HAUS2	Q9NVX0	235 aa		10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.15	□□□□□ -0.78
ECHDC2-222	ENST00000539680	UGGT2	Q9NYU1	1516 aa		10.15	□□□□□ -0.79
ECHDC2-222	ENST00000539680	ELP1	O95163	1332 aa		10.15	□□□□□ -0.79
ECHDC2-222	ENST00000539680	ERCC6L	Q2NKX8	1250 aa		10.15	□□□□□ -0.79
ECHDC2-222	ENST00000539680	DZIP3	Q86Y13	1208 aa	Known RBP	10.15	□□□□□ -0.79
ECHDC2-222	ENST00000539680	CCDC63	Q8NA47	563 aa		10.15	□□□□□ -0.79
ECHDC2-222	ENST00000539680	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	10.15	□□□□□ -0.79
ECHDC2-222	ENST00000539680	DHX58	Q96C10	678 aa		10.15	□□□□□ -0.79
ECHDC2-222	ENST00000539680	CTTNBP2	Q8WZ74	1663 aa		10.15	□□□□□ -0.79
ECHDC2-222	ENST00000539680	EIF4G3	O43432	1585 aa	Known RBP	10.14	□□□□□ -0.79
ECHDC2-222	ENST00000539680	CCDC121	Q6ZUS5	278 aa		10.14	□□□□□ -0.79
ECHDC2-222	ENST00000539680	TTC6	Q86TZ1	520 aa		10.14	□□□□□ -0.79
ECHDC2-222	ENST00000539680	TXNDC16	Q9P2K2	825 aa		10.14	□□□□□ -0.79
ECHDC2-222	ENST00000539680	LDHB	P07195	334 aa	Known RBP	10.14	□□□□□ -0.79
ECHDC2-222	ENST00000539680	CA8	P35219	290 aa		10.14	□□□□□ -0.79
ECHDC2-222	ENST00000539680	WDR44	Q5JSH3	913 aa		10.14	□□□□□ -0.79
ECHDC2-222	ENST00000539680	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.14	□□□□□ -0.79
ECHDC2-222	ENST00000539680	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	10.14	□□□□□ -0.79
ECHDC2-222	ENST00000539680	CCDC110	Q8TBZ0	833 aa		10.14	□□□□□ -0.79
ECHDC2-222	ENST00000539680	GIMAP6	Q6P9H5	292 aa		10.14	□□□□□ -0.79
ECHDC2-222	ENST00000539680	SV2B	Q7L1I2	683 aa		10.14	□□□□□ -0.79
ECHDC2-222	ENST00000539680	GPR161	Q8N6U8	529 aa	Known RBP	10.14	□□□□□ -0.79
ECHDC2-222	ENST00000539680	CCDC26	Q8TAB7	109 aa		10.14	□□□□□ -0.79
ECHDC2-222	ENST00000539680	COPS6	Q7L5N1	327 aa		10.14	□□□□□ -0.79
ECHDC2-222	ENST00000539680	FAM169A	Q9Y6X4	670 aa		10.14	□□□□□ -0.79
ECHDC2-222	ENST00000539680	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	ISM2	Q6H9L7	571 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	CROCCP2	Q86T23	111 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	NBPF11	Q86T75	865 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	CDAN1	Q8IWY9	1227 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	IQUB	Q8NA54	791 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	LINS1	Q8NG48	757 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	VTI1A	Q96AJ9	217 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	PAIP2	Q9BPZ3	127 aa	Known RBP	10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	CCDC94	Q9BW85	323 aa	Predicted RBP	10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	GDPD2	Q9HCC8	539 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	RTCB	Q9Y3I0	505 aa	Known RBP	10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	TIGD1	Q96MW7	591 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	PIK3C2G	O75747	1445 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	LMOD1	P29536	600 aa	Predicted RBP	10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	SLC8A3	P57103	927 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	SETDB1	Q15047	1291 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	DCAF5	Q96JK2	942 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	TMEM110-MUSTN1	A8MSY1	372 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	PPP1R7	Q15435	360 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	DDB1	Q16531	1140 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	CNNM4	Q6P4Q7	775 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	MAGEB6	Q8N7X4	407 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	RGS22	Q8NE09	1264 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	ZWINT	O95229	277 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	NBPF14	Q5TI25	921 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	LMBR1L	Q6UX01	489 aa		10.13	□□□□□ -0.79
ECHDC2-222	ENST00000539680	DHX32	Q7L7V1	743 aa	Known RBP	10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms