RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 GUCY1B3Q02153 619 aa21.5■■□□□ 1.03
SFSWAP-207ENST00000538548 MCMDC2Q4G0Z9 681 aa21.5■■□□□ 1.03
SFSWAP-207ENST00000538548 UTP14AQ9BVJ6 771 aaKnown RBP21.5■■□□□ 1.03
SFSWAP-207ENST00000538548 BIN1O00499 593 aa21.5■■□□□ 1.03
SFSWAP-207ENST00000538548 NLRP6P59044 892 aa21.5■■□□□ 1.03
SFSWAP-207ENST00000538548 CCT2P78371 535 aaKnown RBP21.5■■□□□ 1.03
SFSWAP-207ENST00000538548 STK38Q15208 465 aa21.5■■□□□ 1.03
SFSWAP-207ENST00000538548 CCDC129Q6ZRS4 1044 aa21.5■■□□□ 1.03
SFSWAP-207ENST00000538548 EXOC4Q96A65 974 aa21.5■■□□□ 1.03
SFSWAP-207ENST00000538548 CHMP4CQ96CF2 233 aa21.5■■□□□ 1.03
SFSWAP-207ENST00000538548 LTV1Q96GA3 475 aaPredicted RBP21.5■■□□□ 1.03
SFSWAP-207ENST00000538548 SEC62Q99442 399 aaKnown RBP21.5■■□□□ 1.03
SFSWAP-207ENST00000538548 YEATS4O95619 227 aa21.49■■□□□ 1.03
SFSWAP-207ENST00000538548 CCDC191Q8NCU4 936 aa21.49■■□□□ 1.03
SFSWAP-207ENST00000538548 GOLGA5Q8TBA6 731 aa21.49■■□□□ 1.03
SFSWAP-207ENST00000538548 CARMIL3Q8ND23 1372 aa21.49■■□□□ 1.03
SFSWAP-207ENST00000538548 MAP3K9P80192 1104 aa21.49■■□□□ 1.03
SFSWAP-207ENST00000538548 HSD3B7Q9H2F3 369 aa21.49■■□□□ 1.03
SFSWAP-207ENST00000538548 EFCC1Q9HA90 598 aa21.49■■□□□ 1.03
SFSWAP-207ENST00000538548 POLR3EQ9NVU0 708 aa21.49■■□□□ 1.03
SFSWAP-207ENST00000538548 LAMA4Q16363 1823 aa21.49■■□□□ 1.03
SFSWAP-207ENST00000538548 VWA3AA6NCI4 1184 aa21.48■■□□□ 1.03
SFSWAP-207ENST00000538548 BTBD11A6QL63 1104 aa21.48■■□□□ 1.03
SFSWAP-207ENST00000538548 ATP1A3P13637 1013 aa21.48■■□□□ 1.03
SFSWAP-207ENST00000538548 RSRC2Q7L4I2 434 aaKnown RBP21.48■■□□□ 1.03
SFSWAP-207ENST00000538548 CCDC34Q96HJ3 373 aa21.48■■□□□ 1.03
SFSWAP-207ENST00000538548 GOLGA6L9A6NEM1 432 aa21.48■■□□□ 1.03
SFSWAP-207ENST00000538548 MYO1CO00159 1063 aa21.48■■□□□ 1.03
SFSWAP-207ENST00000538548 ARHGAP6O43182 974 aa21.48■■□□□ 1.03
SFSWAP-207ENST00000538548 ZNF202O95125 648 aa21.48■■□□□ 1.03
SFSWAP-207ENST00000538548 UBASH3AP57075 661 aa21.48■■□□□ 1.03
SFSWAP-207ENST00000538548 EXOSC10Q01780 885 aaKnown RBP21.48■■□□□ 1.03
SFSWAP-207ENST00000538548 FUT8Q9BYC5 575 aa21.48■■□□□ 1.03
SFSWAP-207ENST00000538548 EPC1Q9H2F5 836 aa21.48■■□□□ 1.03
SFSWAP-207ENST00000538548 NCOA5Q9HCD5 579 aaKnown RBP21.48■■□□□ 1.03
SFSWAP-207ENST00000538548 TNNT3P45378 269 aaPredicted RBP21.47■■□□□ 1.03
SFSWAP-207ENST00000538548 TEFQ10587 303 aa21.47■■□□□ 1.03
SFSWAP-207ENST00000538548 PROSER3Q2NL68 480 aa21.47■■□□□ 1.03
SFSWAP-207ENST00000538548 USHBP1Q8N6Y0 703 aa21.47■■□□□ 1.03
SFSWAP-207ENST00000538548 RABGGTAQ92696 567 aa21.47■■□□□ 1.03
SFSWAP-207ENST00000538548 PPP2R2CQ9Y2T4 447 aa21.47■■□□□ 1.03
SFSWAP-207ENST00000538548 SETD1BQ9UPS6 1966 aaKnown RBP21.47■■□□□ 1.03
SFSWAP-207ENST00000538548 VSTM4Q8IW00 320 aa21.47■■□□□ 1.03
SFSWAP-207ENST00000538548 FBXO18Q8NFZ0 1043 aa21.47■■□□□ 1.03
SFSWAP-207ENST00000538548 ZNF274Q96GC6 653 aaPredicted RBP21.47■■□□□ 1.03
SFSWAP-207ENST00000538548 MRFAP1Q9Y605 127 aa21.47■■□□□ 1.03
SFSWAP-207ENST00000538548 SPTLC2O15270 562 aa21.46■■□□□ 1.03
SFSWAP-207ENST00000538548 CASQ1P31415 396 aa21.46■■□□□ 1.03
SFSWAP-207ENST00000538548 PPP2R3AQ06190 1150 aa21.46■■□□□ 1.03
SFSWAP-207ENST00000538548 JAKMIP3Q5VZ66 844 aa21.46■■□□□ 1.03
SFSWAP-207ENST00000538548 RSPH14Q9UHP6 348 aa21.46■■□□□ 1.03
SFSWAP-207ENST00000538548 ADAM21Q9UKJ8 722 aa21.46■■□□□ 1.03
SFSWAP-207ENST00000538548 CLIC4Q9Y696 253 aa21.46■■□□□ 1.03
SFSWAP-207ENST00000538548 PARD6BQ9BYG5 372 aa21.46■■□□□ 1.03
SFSWAP-207ENST00000538548 DBNLQ9UJU6 430 aaKnown RBP21.46■■□□□ 1.03
SFSWAP-207ENST00000538548 SERPINC1P01008 464 aa21.45■■□□□ 1.02
SFSWAP-207ENST00000538548 PDIA3P30101 505 aaKnown RBP21.45■■□□□ 1.02
SFSWAP-207ENST00000538548 GNL2Q13823 731 aaKnown RBP21.45■■□□□ 1.02
SFSWAP-207ENST00000538548 ESCO1Q5FWF5 840 aa21.45■■□□□ 1.02
SFSWAP-207ENST00000538548 KLHDC4Q8TBB5 520 aa21.45■■□□□ 1.02
SFSWAP-207ENST00000538548 CFAP100Q494V2 611 aa21.45■■□□□ 1.02
SFSWAP-207ENST00000538548 IQUBQ8NA54 791 aa21.45■■□□□ 1.02
SFSWAP-207ENST00000538548 MYO1BO43795 1136 aa21.44■■□□□ 1.02
SFSWAP-207ENST00000538548 TOP1P11387 765 aaKnown RBP21.44■■□□□ 1.02
SFSWAP-207ENST00000538548 FDPSP14324 419 aaKnown RBP21.44■■□□□ 1.02
SFSWAP-207ENST00000538548 MYL5Q02045 173 aa21.44■■□□□ 1.02
SFSWAP-207ENST00000538548 TMEM139Q8IV31 216 aa21.44■■□□□ 1.02
SFSWAP-207ENST00000538548 DPF2Q92785 391 aa21.44■■□□□ 1.02
SFSWAP-207ENST00000538548 GNG11P61952 73 aa21.44■■□□□ 1.02
SFSWAP-207ENST00000538548 SH3TC1Q8TE82 1336 aa21.44■■□□□ 1.02
SFSWAP-207ENST00000538548 CCDC151A5D8V7 595 aa21.43■■□□□ 1.02
SFSWAP-207ENST00000538548 PPFIA3O75145 1194 aa21.43■■□□□ 1.02
SFSWAP-207ENST00000538548 CHGBP05060 677 aa21.43■■□□□ 1.02
SFSWAP-207ENST00000538548 CMA1P23946 247 aa21.43■■□□□ 1.02
SFSWAP-207ENST00000538548 SRLQ86TD4 932 aa21.43■■□□□ 1.02
SFSWAP-207ENST00000538548 GOLGA1Q92805 767 aa21.43■■□□□ 1.02
SFSWAP-207ENST00000538548 WDR24Q96S15 920 aa21.43■■□□□ 1.02
SFSWAP-207ENST00000538548 DDX58O95786 925 aaKnown RBP21.43■■□□□ 1.02
SFSWAP-207ENST00000538548 LMAN1P49257 510 aa21.43■■□□□ 1.02
SFSWAP-207ENST00000538548 C10orf67Q8IYJ2 551 aa21.43■■□□□ 1.02
SFSWAP-207ENST00000538548 FAM177A1Q8N128 213 aaPredicted RBP21.43■■□□□ 1.02
SFSWAP-207ENST00000538548 ORAI2Q96SN7 254 aa21.43■■□□□ 1.02
SFSWAP-207ENST00000538548 LCMT1Q9UIC8 334 aa21.43■■□□□ 1.02
SFSWAP-207ENST00000538548 TUBE1Q9UJT0 475 aa21.43■■□□□ 1.02
SFSWAP-207ENST00000538548 ANKARQ7Z5J8 1434 aa21.43■■□□□ 1.02
SFSWAP-207ENST00000538548 PFKFB1P16118 471 aa21.42■■□□□ 1.02
SFSWAP-207ENST00000538548 TNNI3KQ59H18 835 aa21.42■■□□□ 1.02
SFSWAP-207ENST00000538548 BRAPQ7Z569 592 aa21.42■■□□□ 1.02
SFSWAP-207ENST00000538548 ATG3Q9NT62 314 aa21.42■■□□□ 1.02
SFSWAP-207ENST00000538548 FPGT-TNNI3KV9GXZ4 949 aa21.42■■□□□ 1.02
SFSWAP-207ENST00000538548 TRIM66O15016 1216 aa21.42■■□□□ 1.02
SFSWAP-207ENST00000538548 ACTN2P35609 894 aa21.42■■□□□ 1.02
SFSWAP-207ENST00000538548 LONRF2Q1L5Z9 754 aa21.42■■□□□ 1.02
SFSWAP-207ENST00000538548 AXDND1Q5T1B0 1012 aaPredicted RBP21.42■■□□□ 1.02
SFSWAP-207ENST00000538548 MYSM1Q5VVJ2 828 aa21.42■■□□□ 1.02
SFSWAP-207ENST00000538548 HAUS7Q99871 368 aa21.42■■□□□ 1.02
SFSWAP-207ENST00000538548 NDUFB9Q9Y6M9 179 aa21.42■■□□□ 1.02
SFSWAP-207ENST00000538548 MAP2K7O14733 419 aa21.42■■□□□ 1.02
SFSWAP-207ENST00000538548 TXLNAP40222 546 aa21.42■■□□□ 1.02
SFSWAP-207ENST00000538548 BRD3Q15059 726 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms