RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 B4E1Z4 1266 aa13.07□□□□□ -0.32
TNC-211ENST00000537320 NAPAP54920 295 aa13.07□□□□□ -0.32
TNC-211ENST00000537320 RBM17Q96I25 401 aaKnown RBP13.07□□□□□ -0.32
TNC-211ENST00000537320 USP21Q9UK80 565 aa13.07□□□□□ -0.32
TNC-211ENST00000537320 NUP88Q99567 741 aaPredicted RBP13.06□□□□□ -0.32
TNC-211ENST00000537320 UFL1O94874 794 aa13.06□□□□□ -0.32
TNC-211ENST00000537320 MTIF2P46199 727 aaKnown RBP13.06□□□□□ -0.32
TNC-211ENST00000537320 ANO6Q4KMQ2 910 aa13.06□□□□□ -0.32
TNC-211ENST00000537320 CLTCL1P53675 1640 aa13.06□□□□□ -0.32
TNC-211ENST00000537320 SPA17Q15506 151 aa13.06□□□□□ -0.32
TNC-211ENST00000537320 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.06□□□□□ -0.32
TNC-211ENST00000537320 TRIM75PA6NK02 468 aa13.06□□□□□ -0.32
TNC-211ENST00000537320 DESP17661 470 aa13.06□□□□□ -0.32
TNC-211ENST00000537320 EDC3Q96F86 508 aaKnown RBP13.06□□□□□ -0.32
TNC-211ENST00000537320 TRMT1Q9NXH9 659 aaKnown RBP13.06□□□□□ -0.32
TNC-211ENST00000537320 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.06□□□□□ -0.32
TNC-211ENST00000537320 GSPT1P15170 499 aaKnown RBP13.05□□□□□ -0.32
TNC-211ENST00000537320 PROSER3Q2NL68 480 aa13.05□□□□□ -0.32
TNC-211ENST00000537320 EYA3Q99504 573 aa13.05□□□□□ -0.32
TNC-211ENST00000537320 DNAI2Q9GZS0 605 aa13.05□□□□□ -0.32
TNC-211ENST00000537320 ZAP70P43403 619 aa13.05□□□□□ -0.32
TNC-211ENST00000537320 ENOX2Q16206 610 aaKnown RBP13.05□□□□□ -0.32
TNC-211ENST00000537320 GSDMDP57764 484 aa13.05□□□□□ -0.32
TNC-211ENST00000537320 EAF2Q96CJ1 260 aaPredicted RBP13.05□□□□□ -0.32
TNC-211ENST00000537320 ERLIN1O75477 346 aa13.04□□□□□ -0.32
TNC-211ENST00000537320 ATP5JP18859 108 aa13.04□□□□□ -0.32
TNC-211ENST00000537320 FAM200AQ8TCP9 573 aa13.04□□□□□ -0.32
TNC-211ENST00000537320 VEZTQ9HBM0 779 aa13.04□□□□□ -0.32
TNC-211ENST00000537320 MAP3K4Q9Y6R4 1608 aa13.04□□□□□ -0.32
TNC-211ENST00000537320 CHMP4BP1P59074 171 aa13.04□□□□□ -0.32
TNC-211ENST00000537320 UBXN4Q92575 508 aa13.04□□□□□ -0.32
TNC-211ENST00000537320 TRIM21P19474 475 aaKnown RBP13.04□□□□□ -0.32
TNC-211ENST00000537320 SAMM50Q9Y512 469 aa13.04□□□□□ -0.32
TNC-211ENST00000537320 A2ML1A8K2U0 1454 aa13.04□□□□□ -0.32
TNC-211ENST00000537320 NEMFO60524 1076 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 CALML3P27482 149 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 STAT6P42226 847 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 KIF18AQ8NI77 898 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 DNAJC25Q9H1X3 360 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 XRCC6P12956 609 aaKnown RBP eCLIP13.03□□□□□ -0.32
TNC-211ENST00000537320 AXDND1Q5T1B0 1012 aaPredicted RBP13.03□□□□□ -0.32
TNC-211ENST00000537320 TEX11Q8IYF3 940 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 ERBB3P21860 1342 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 MROH5Q6ZUA9 1318 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 YEATS4O95619 227 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 POTEJP0CG39 1038 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 CCDC40Q4G0X9 1142 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 TAF4BQ92750 862 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 C16orf45Q96MC5 204 aaPredicted RBP13.03□□□□□ -0.32
TNC-211ENST00000537320 CARD10Q9BWT7 1032 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 C6orf50Q9HD87 102 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 KIF5CO60282 957 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 ZNF853P0CG23 659 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 HSP90AA4PQ58FG1 418 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 PPP4R3AQ6IN85 833 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 BRAPQ7Z569 592 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 LRRC27Q9C0I9 530 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 NCOA5Q9HCD5 579 aaKnown RBP13.03□□□□□ -0.32
TNC-211ENST00000537320 ERBB4Q15303 1308 aa13.03□□□□□ -0.32
TNC-211ENST00000537320 URI1O94763 535 aaPredicted RBP13.02□□□□□ -0.32
TNC-211ENST00000537320 CTSWP56202 376 aa13.02□□□□□ -0.32
TNC-211ENST00000537320 TCERG1LQ5VWI1 586 aa13.02□□□□□ -0.32
TNC-211ENST00000537320 RRAGBQ5VZM2 374 aa13.02□□□□□ -0.32
TNC-211ENST00000537320 SPATA5Q8NB90 893 aa13.02□□□□□ -0.32
TNC-211ENST00000537320 SAP30BPQ9UHR5 308 aaKnown RBP13.02□□□□□ -0.32
TNC-211ENST00000537320 PRDM1O75626 825 aa13.02□□□□□ -0.32
TNC-211ENST00000537320 HSPA4P34932 840 aa13.02□□□□□ -0.32
TNC-211ENST00000537320 KRT2P35908 639 aa13.02□□□□□ -0.32
TNC-211ENST00000537320 TDRD12Q587J7 1177 aaKnown RBP13.02□□□□□ -0.32
TNC-211ENST00000537320 RRP36Q96EU6 259 aaKnown RBP13.02□□□□□ -0.32
TNC-211ENST00000537320 TMEM87BQ96K49 555 aa13.02□□□□□ -0.32
TNC-211ENST00000537320 TRIM47Q96LD4 638 aa13.02□□□□□ -0.32
TNC-211ENST00000537320 EXOC1Q9NV70 894 aa13.02□□□□□ -0.32
TNC-211ENST00000537320 GGA1Q9UJY5 639 aa13.02□□□□□ -0.32
TNC-211ENST00000537320 DHX58Q96C10 678 aa13.02□□□□□ -0.33
TNC-211ENST00000537320 SCLT1Q96NL6 688 aa13.02□□□□□ -0.33
TNC-211ENST00000537320 RMND1Q9NWS8 449 aa13.02□□□□□ -0.33
TNC-211ENST00000537320 ASAP1Q9ULH1 1129 aa13.02□□□□□ -0.33
TNC-211ENST00000537320 PRAMEF22A3QJZ6 481 aa13.02□□□□□ -0.33
TNC-211ENST00000537320 DTNBO60941 627 aa13.02□□□□□ -0.33
TNC-211ENST00000537320 TNNT1P13805 278 aa13.02□□□□□ -0.33
TNC-211ENST00000537320 KIF4BQ2VIQ3 1234 aa13.02□□□□□ -0.33
TNC-211ENST00000537320 TTC6Q86TZ1 520 aa13.02□□□□□ -0.33
TNC-211ENST00000537320 UNC13BO14795 1591 aa13.02□□□□□ -0.33
TNC-211ENST00000537320 CDK12Q9NYV4 1490 aaPredicted RBP13.02□□□□□ -0.33
TNC-211ENST00000537320 N4BP3O15049 544 aa13.01□□□□□ -0.33
TNC-211ENST00000537320 ANGEL1Q9UNK9 670 aaKnown RBP13.01□□□□□ -0.33
TNC-211ENST00000537320 ZNF532Q9HCE3 1301 aa13.01□□□□□ -0.33
TNC-211ENST00000537320 IBTKQ9P2D0 1353 aaPredicted RBP13.01□□□□□ -0.33
TNC-211ENST00000537320 RBM26Q5T8P6 1007 aaKnown RBP13.01□□□□□ -0.33
TNC-211ENST00000537320 RNF17Q9BXT8 1623 aaKnown RBP13.01□□□□□ -0.33
TNC-211ENST00000537320 LIG1P18858 919 aa13.01□□□□□ -0.33
TNC-211ENST00000537320 JDP2Q8WYK2 163 aa13.01□□□□□ -0.33
TNC-211ENST00000537320 UBASH3AP57075 661 aa13.01□□□□□ -0.33
TNC-211ENST00000537320 TYRO3Q06418 890 aa13.01□□□□□ -0.33
TNC-211ENST00000537320 VPS36Q86VN1 386 aa13.01□□□□□ -0.33
TNC-211ENST00000537320 AOPEPQ8N6M6 819 aa13.01□□□□□ -0.33
TNC-211ENST00000537320 ZBTB38Q8NAP3 1195 aaPredicted RBP13.01□□□□□ -0.33
TNC-211ENST00000537320 ERMNQ8TAM6 284 aa13.01□□□□□ -0.33
TNC-211ENST00000537320 AATFQ9NY61 560 aaKnown RBP eCLIP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms