RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 ADALQ6DHV7 355 aa18.75■□□□□ 0.59
CHMP1A-202ENST00000535997 SARM1Q6SZW1 724 aa18.75■□□□□ 0.59
CHMP1A-202ENST00000535997 NCOA7Q8NI08 942 aa18.75■□□□□ 0.59
CHMP1A-202ENST00000535997 ZNF330Q9Y3S2 320 aaPredicted RBP18.75■□□□□ 0.59
CHMP1A-202ENST00000535997 RIPOR2Q9Y4F9 1068 aa18.75■□□□□ 0.59
CHMP1A-202ENST00000535997 WDR19Q8NEZ3 1342 aa18.75■□□□□ 0.59
CHMP1A-202ENST00000535997 SCARF1Q14162 830 aa18.74■□□□□ 0.59
CHMP1A-202ENST00000535997 PUS7LQ9H0K6 701 aaKnown RBP18.74■□□□□ 0.59
CHMP1A-202ENST00000535997 GOLPH3LQ9H4A5 285 aa18.74■□□□□ 0.59
CHMP1A-202ENST00000535997 SLAIN2Q9P270 581 aa18.74■□□□□ 0.59
CHMP1A-202ENST00000535997 ZNF213O14771 459 aa18.74■□□□□ 0.59
CHMP1A-202ENST00000535997 PRC1O43663 620 aa18.74■□□□□ 0.59
CHMP1A-202ENST00000535997 CHAF1AQ13111 956 aaPredicted RBP18.74■□□□□ 0.59
CHMP1A-202ENST00000535997 GIGYF2Q6Y7W6 1299 aaKnown RBP18.74■□□□□ 0.59
CHMP1A-202ENST00000535997 MB21D2Q8IYB1 491 aaPredicted RBP18.74■□□□□ 0.59
CHMP1A-202ENST00000535997 RGS22Q8NE09 1264 aa18.74■□□□□ 0.59
CHMP1A-202ENST00000535997 ZNF512BQ96KM6 892 aaPredicted RBP18.74■□□□□ 0.59
CHMP1A-202ENST00000535997 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.74■□□□□ 0.59
CHMP1A-202ENST00000535997 STRN4Q9NRL3 753 aa18.74■□□□□ 0.59
CHMP1A-202ENST00000535997 CDHR2Q9BYE9 1310 aa18.74■□□□□ 0.59
CHMP1A-202ENST00000535997 HAND2P61296 217 aa18.73■□□□□ 0.59
CHMP1A-202ENST00000535997 GUCY1B3Q02153 619 aa18.73■□□□□ 0.59
CHMP1A-202ENST00000535997 ZSCAN25Q6NSZ9 544 aa18.73■□□□□ 0.59
CHMP1A-202ENST00000535997 A0A1W2PQ27 194 aa18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 A0A1W2PQ64 194 aa18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 A0A1W2PQD8 194 aa18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 ATP2B3Q16720 1220 aa18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 LDHAL6AQ6ZMR3 332 aa18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 DNAJC10Q8IXB1 793 aa18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 FBXO18Q8NFZ0 1043 aa18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 CCDC85AQ96PX6 553 aaPredicted RBP18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 GPHNQ9NQX3 736 aaPredicted RBP18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 ANO10Q9NW15 660 aa18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 PCDHA7Q9UN72 937 aa18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 MAP3K15Q6ZN16 1313 aa18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 SHANK3Q9BYB0 1731 aa18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 GPAA1O43292 621 aa18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 RALYLQ86SE5 291 aaKnown RBP18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 FSIP1Q8NA03 581 aa18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 PIGBQ92521 554 aa18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 C8orf76Q96K31 380 aa18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 CLIP2Q9UDT6 1046 aa18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 NRBP1Q9UHY1 535 aa18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 ASAP1Q9ULH1 1129 aa18.72■□□□□ 0.59
CHMP1A-202ENST00000535997 KLF18A0A0U1RQI7 1052 aa18.71■□□□□ 0.59
CHMP1A-202ENST00000535997 PPFIA3O75145 1194 aa18.71■□□□□ 0.59
CHMP1A-202ENST00000535997 HSP90AB3PQ58FF7 597 aa18.71■□□□□ 0.59
CHMP1A-202ENST00000535997 METTL24Q5JXM2 366 aa18.71■□□□□ 0.59
CHMP1A-202ENST00000535997 TTLL11Q8NHH1 800 aa18.71■□□□□ 0.59
CHMP1A-202ENST00000535997 MRFAP1L1Q96HT8 127 aa18.71■□□□□ 0.59
CHMP1A-202ENST00000535997 HPS5Q9UPZ3 1129 aa18.71■□□□□ 0.59
CHMP1A-202ENST00000535997 TTF1Q15361 905 aaPredicted RBP18.71■□□□□ 0.59
CHMP1A-202ENST00000535997 BRAPQ7Z569 592 aa18.71■□□□□ 0.59
CHMP1A-202ENST00000535997 FMR1NBQ8N0W7 255 aaPredicted RBP18.71■□□□□ 0.59
CHMP1A-202ENST00000535997 LINC00301Q8NCQ3 95 aa18.71■□□□□ 0.59
CHMP1A-202ENST00000535997 MRPS27Q92552 414 aaKnown RBP18.71■□□□□ 0.59
CHMP1A-202ENST00000535997 POLR3EQ9NVU0 708 aa18.71■□□□□ 0.59
CHMP1A-202ENST00000535997 NWD2Q9ULI1 1742 aa18.71■□□□□ 0.59
CHMP1A-202ENST00000535997 BECN2A8MW95 431 aa18.7■□□□□ 0.58
CHMP1A-202ENST00000535997 CPLX1O14810 134 aa18.7■□□□□ 0.58
CHMP1A-202ENST00000535997 ITGA6P23229 1130 aa18.7■□□□□ 0.58
CHMP1A-202ENST00000535997 C11orf57Q6ZUT1 292 aaPredicted RBP18.7■□□□□ 0.58
CHMP1A-202ENST00000535997 NLRP10Q86W26 655 aa18.7■□□□□ 0.58
CHMP1A-202ENST00000535997 KCNG4Q8TDN1 519 aa18.7■□□□□ 0.58
CHMP1A-202ENST00000535997 ORC3Q9UBD5 711 aaPredicted RBP18.7■□□□□ 0.58
CHMP1A-202ENST00000535997 XIRP1Q702N8 1843 aaKnown RBP18.7■□□□□ 0.58
CHMP1A-202ENST00000535997 YEATS4O95619 227 aa18.7■□□□□ 0.58
CHMP1A-202ENST00000535997 MCAMP43121 646 aa18.7■□□□□ 0.58
CHMP1A-202ENST00000535997 ANTXR2P58335 489 aa18.7■□□□□ 0.58
CHMP1A-202ENST00000535997 NAT10Q9H0A0 1025 aaKnown RBP18.7■□□□□ 0.58
CHMP1A-202ENST00000535997 ANKRD18BA2A2Z9 1011 aa18.69■□□□□ 0.58
CHMP1A-202ENST00000535997 GOLGA8BA8MQT2 603 aa18.69■□□□□ 0.58
CHMP1A-202ENST00000535997 ADD2P35612 726 aa18.69■□□□□ 0.58
CHMP1A-202ENST00000535997 TRDNQ13061 729 aa18.69■□□□□ 0.58
CHMP1A-202ENST00000535997 PI16Q6UXB8 463 aa18.69■□□□□ 0.58
CHMP1A-202ENST00000535997 LRMPQ12912 555 aa18.69■□□□□ 0.58
CHMP1A-202ENST00000535997 SF3A1Q15459 793 aaKnown RBP18.69■□□□□ 0.58
CHMP1A-202ENST00000535997 SDF4Q9BRK5 362 aa18.69■□□□□ 0.58
CHMP1A-202ENST00000535997 NEMFO60524 1076 aa18.68■□□□□ 0.58
CHMP1A-202ENST00000535997 STK38Q15208 465 aa18.68■□□□□ 0.58
CHMP1A-202ENST00000535997 UBE3CQ15386 1083 aa18.68■□□□□ 0.58
CHMP1A-202ENST00000535997 HLFQ16534 295 aa18.68■□□□□ 0.58
CHMP1A-202ENST00000535997 SLC9C2Q5TAH2 1124 aa18.68■□□□□ 0.58
CHMP1A-202ENST00000535997 CEP57L1Q8IYX8 460 aa18.68■□□□□ 0.58
CHMP1A-202ENST00000535997 SYNE4Q8N205 404 aa18.68■□□□□ 0.58
CHMP1A-202ENST00000535997 GREM2Q9H772 168 aa18.68■□□□□ 0.58
CHMP1A-202ENST00000535997 CNNM1Q9NRU3 951 aa18.68■□□□□ 0.58
CHMP1A-202ENST00000535997 HSPA2P54652 639 aa18.67■□□□□ 0.58
CHMP1A-202ENST00000535997 CTSWP56202 376 aa18.67■□□□□ 0.58
CHMP1A-202ENST00000535997 RIC1Q4ADV7 1423 aa18.67■□□□□ 0.58
CHMP1A-202ENST00000535997 SYNE3Q6ZMZ3 975 aa18.67■□□□□ 0.58
CHMP1A-202ENST00000535997 DHX40Q8IX18 779 aaKnown RBP18.67■□□□□ 0.58
CHMP1A-202ENST00000535997 CACTINQ8WUQ7 758 aaKnown RBP18.67■□□□□ 0.58
CHMP1A-202ENST00000535997 MYH7P12883 1935 aa18.67■□□□□ 0.58
CHMP1A-202ENST00000535997 PDE8BO95263 885 aa18.67■□□□□ 0.58
CHMP1A-202ENST00000535997 POLR3DP05423 398 aaPredicted RBP18.67■□□□□ 0.58
CHMP1A-202ENST00000535997 MYSM1Q5VVJ2 828 aa18.67■□□□□ 0.58
CHMP1A-202ENST00000535997 OTUD7BQ6GQQ9 843 aa18.67■□□□□ 0.58
CHMP1A-202ENST00000535997 VGLL2Q8N8G2 317 aa18.67■□□□□ 0.58
CHMP1A-202ENST00000535997 CLIC4Q9Y696 253 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms