RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	AMOTL2	Q9Y2J4	779 aa		5.77	□□□□□ -1.49
LMO7-223	ENST00000533299	GHRH	P01286	108 aa		5.76	□□□□□ -1.49
LMO7-223	ENST00000533299	EDN3	P14138	238 aa		5.76	□□□□□ -1.49
LMO7-223	ENST00000533299	GPLD1	P80108	840 aa		5.76	□□□□□ -1.49
LMO7-223	ENST00000533299	FMR1	Q06787	632 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
LMO7-223	ENST00000533299	MSL1	Q68DK7	614 aa		5.76	□□□□□ -1.49
LMO7-223	ENST00000533299	NCAPG2	Q86XI2	1143 aa		5.76	□□□□□ -1.49
LMO7-223	ENST00000533299	ABI1	Q8IZP0	508 aa		5.76	□□□□□ -1.49
LMO7-223	ENST00000533299	TRPM4	Q8TD43	1214 aa		5.76	□□□□□ -1.49
LMO7-223	ENST00000533299	CSRNP1	Q96S65	589 aa		5.76	□□□□□ -1.49
LMO7-223	ENST00000533299	ZFYVE28	Q9HCC9	887 aa		5.76	□□□□□ -1.49
LMO7-223	ENST00000533299	FOXD3	Q9UJU5	478 aa	Predicted RBP	5.76	□□□□□ -1.49
LMO7-223	ENST00000533299	HOXD8	P13378	290 aa	Predicted RBP	5.76	□□□□□ -1.49
LMO7-223	ENST00000533299	ZNF326	Q5BKZ1	582 aa	Known RBP	5.76	□□□□□ -1.49
LMO7-223	ENST00000533299	ALG1L	Q6GMV1	187 aa		5.76	□□□□□ -1.49
LMO7-223	ENST00000533299	C1orf127	Q8N9H9	656 aa		5.76	□□□□□ -1.49
LMO7-223	ENST00000533299	DNAJB12	Q9NXW2	375 aa	Known RBP	5.76	□□□□□ -1.49
LMO7-223	ENST00000533299	STOML1	Q9UBI4	398 aa		5.76	□□□□□ -1.49
LMO7-223	ENST00000533299	SLC6A14	Q9UN76	642 aa		5.76	□□□□□ -1.49
LMO7-223	ENST00000533299	LOC102724428	A0A0B4J2F2	783 aa		5.75	□□□□□ -1.49
LMO7-223	ENST00000533299	EIF1AY	O14602	144 aa	Known RBP	5.75	□□□□□ -1.49
LMO7-223	ENST00000533299	IGHA2	P01877	340 aa		5.75	□□□□□ -1.49
LMO7-223	ENST00000533299	SIK1	P57059	783 aa		5.75	□□□□□ -1.49
LMO7-223	ENST00000533299	FBF1	Q8TES7	1133 aa		5.75	□□□□□ -1.49
LMO7-223	ENST00000533299	CNTN3	Q9P232	1028 aa		5.75	□□□□□ -1.49
LMO7-223	ENST00000533299	PNMA6F	A0A0J9YX94	578 aa		5.74	□□□□□ -1.49
LMO7-223	ENST00000533299	ORC1	Q13415	861 aa		5.74	□□□□□ -1.49
LMO7-223	ENST00000533299	ENOX2	Q16206	610 aa	Known RBP	5.74	□□□□□ -1.49
LMO7-223	ENST00000533299		Q6ZS46	218 aa		5.74	□□□□□ -1.49
LMO7-223	ENST00000533299	FAM35A	Q86V20	835 aa		5.74	□□□□□ -1.49
LMO7-223	ENST00000533299	NPAS4	Q8IUM7	802 aa		5.74	□□□□□ -1.49
LMO7-223	ENST00000533299	NUDT8	Q8WV74	236 aa		5.74	□□□□□ -1.49
LMO7-223	ENST00000533299	BCL2L13	Q9BXK5	485 aa		5.74	□□□□□ -1.49
LMO7-223	ENST00000533299	NLRP2	Q9NX02	1062 aa		5.74	□□□□□ -1.49
LMO7-223	ENST00000533299	PRR19	A6NJB7	356 aa		5.74	□□□□□ -1.49
LMO7-223	ENST00000533299	LDHB	P07195	334 aa	Known RBP	5.74	□□□□□ -1.49
LMO7-223	ENST00000533299	NSUN5	Q96P11	429 aa	Known RBP	5.74	□□□□□ -1.49
LMO7-223	ENST00000533299	PPP4R2	Q9NY27	417 aa		5.74	□□□□□ -1.49
LMO7-223	ENST00000533299	FAM177B	A6PVY3	158 aa		5.73	□□□□□ -1.49
LMO7-223	ENST00000533299	EREG	O14944	169 aa		5.73	□□□□□ -1.49
LMO7-223	ENST00000533299	RGS9	O75916	674 aa	Predicted RBP	5.73	□□□□□ -1.49
LMO7-223	ENST00000533299	KIF4A	O95239	1232 aa		5.73	□□□□□ -1.49
LMO7-223	ENST00000533299	P4HB	P07237	508 aa	Known RBP	5.73	□□□□□ -1.49
LMO7-223	ENST00000533299	EIF2AK2	P19525	551 aa	Known RBP	5.73	□□□□□ -1.49
LMO7-223	ENST00000533299	ELMSAN1	Q6PJG2	1045 aa		5.73	□□□□□ -1.49
LMO7-223	ENST00000533299	GALNT12	Q8IXK2	581 aa		5.73	□□□□□ -1.49
LMO7-223	ENST00000533299	FRMD6	Q96NE9	622 aa		5.73	□□□□□ -1.49
LMO7-223	ENST00000533299	CHRD	Q9H2X0	955 aa		5.73	□□□□□ -1.49
LMO7-223	ENST00000533299	KANSL3	Q9P2N6	904 aa		5.73	□□□□□ -1.49
LMO7-223	ENST00000533299	SALL4	Q9UJQ4	1053 aa		5.73	□□□□□ -1.49
LMO7-223	ENST00000533299		B8ZZF3	427 aa		5.72	□□□□□ -1.49
LMO7-223	ENST00000533299	PRPF40A	O75400	957 aa	Known RBP	5.72	□□□□□ -1.49
LMO7-223	ENST00000533299	SMNDC1	O75940	238 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
LMO7-223	ENST00000533299	CYP2E1	P05181	493 aa	Predicted RBP	5.72	□□□□□ -1.49
LMO7-223	ENST00000533299	CPB1	P15086	417 aa		5.72	□□□□□ -1.49
LMO7-223	ENST00000533299	MLLT1	Q03111	559 aa	Predicted RBP	5.72	□□□□□ -1.49
LMO7-223	ENST00000533299	NFIA	Q12857	509 aa		5.72	□□□□□ -1.49
LMO7-223	ENST00000533299	PSAPL1	Q6NUJ1	521 aa		5.72	□□□□□ -1.49
LMO7-223	ENST00000533299	RGS22	Q8NE09	1264 aa		5.72	□□□□□ -1.49
LMO7-223	ENST00000533299	CCDC74A	Q96AQ1	378 aa		5.72	□□□□□ -1.49
LMO7-223	ENST00000533299	MRPL18	Q9H0U6	180 aa	Known RBP	5.72	□□□□□ -1.49
LMO7-223	ENST00000533299	FRRS1L	Q9P0K9	344 aa		5.72	□□□□□ -1.49
LMO7-223	ENST00000533299	GIPC1	O14908	333 aa		5.71	□□□□□ -1.49
LMO7-223	ENST00000533299	ZNF865	P0CJ78	1059 aa	Predicted RBP	5.71	□□□□□ -1.49
LMO7-223	ENST00000533299	XPC	Q01831	940 aa	Predicted RBP	5.71	□□□□□ -1.49
LMO7-223	ENST00000533299	LILRA6	Q6PI73	481 aa		5.71	□□□□□ -1.49
LMO7-223	ENST00000533299	HFE2	Q6ZVN8	426 aa		5.71	□□□□□ -1.49
LMO7-223	ENST00000533299	CACTIN-AS1	Q8N1I8	211 aa		5.71	□□□□□ -1.49
LMO7-223	ENST00000533299	SPG7	Q9UQ90	795 aa		5.71	□□□□□ -1.49
LMO7-223	ENST00000533299	ZBTB42	B2RXF5	422 aa		5.71	□□□□□ -1.5
LMO7-223	ENST00000533299		F8W735	103 aa	Predicted RBP	5.71	□□□□□ -1.5
LMO7-223	ENST00000533299	DLL1	O00548	723 aa		5.71	□□□□□ -1.5
LMO7-223	ENST00000533299	GADD45B	O75293	160 aa	Predicted RBP	5.71	□□□□□ -1.5
LMO7-223	ENST00000533299	TRAK1	Q9UPV9	953 aa		5.71	□□□□□ -1.5
LMO7-223	ENST00000533299		J3QW42	95 aa		5.7	□□□□□ -1.5
LMO7-223	ENST00000533299	ZNF648	Q5T619	568 aa	Predicted RBP	5.7	□□□□□ -1.5
LMO7-223	ENST00000533299	CEP120	Q8N960	986 aa		5.7	□□□□□ -1.5
LMO7-223	ENST00000533299	GIPC2	Q8TF65	315 aa		5.7	□□□□□ -1.5
LMO7-223	ENST00000533299	TTC9	Q92623	222 aa		5.7	□□□□□ -1.5
LMO7-223	ENST00000533299	PLD4	Q96BZ4	506 aa		5.7	□□□□□ -1.5
LMO7-223	ENST00000533299	DBNDD2	Q9BQY9	259 aa		5.7	□□□□□ -1.5
LMO7-223	ENST00000533299	DHX15	O43143	795 aa	Known RBP	5.69	□□□□□ -1.5
LMO7-223	ENST00000533299	POLR3D	P05423	398 aa	Predicted RBP	5.69	□□□□□ -1.5
LMO7-223	ENST00000533299	USPL1	Q5W0Q7	1092 aa		5.69	□□□□□ -1.5
LMO7-223	ENST00000533299	OSMR	Q99650	979 aa		5.69	□□□□□ -1.5
LMO7-223	ENST00000533299	SRCIN1	Q9C0H9	1055 aa		5.69	□□□□□ -1.5
LMO7-223	ENST00000533299	SMG9	Q9H0W8	520 aa	Known RBP	5.69	□□□□□ -1.5
LMO7-223	ENST00000533299	EHD4	Q9H223	541 aa		5.69	□□□□□ -1.5
LMO7-223	ENST00000533299	MRS2	Q9HD23	443 aa		5.69	□□□□□ -1.5
LMO7-223	ENST00000533299	NPHS2	Q9NP85	383 aa		5.69	□□□□□ -1.5
LMO7-223	ENST00000533299	RBM47	A0AV96	593 aa	Known RBP	5.69	□□□□□ -1.5
LMO7-223	ENST00000533299	ZNF124	Q15973	351 aa		5.69	□□□□□ -1.5
LMO7-223	ENST00000533299	PERM1	Q5SV97	790 aa		5.69	□□□□□ -1.5
LMO7-223	ENST00000533299	COL13A1	Q5TAT6	717 aa	Predicted RBP	5.69	□□□□□ -1.5
LMO7-223	ENST00000533299	KIAA0319	Q5VV43	1072 aa		5.69	□□□□□ -1.5
LMO7-223	ENST00000533299	RNF43	Q68DV7	783 aa		5.69	□□□□□ -1.5
LMO7-223	ENST00000533299	FBXO33	Q7Z6M2	555 aa		5.69	□□□□□ -1.5
LMO7-223	ENST00000533299	PBX4	Q9BYU1	374 aa		5.69	□□□□□ -1.5
LMO7-223	ENST00000533299	ZFYVE1	Q9HBF4	777 aa		5.69	□□□□□ -1.5
LMO7-223	ENST00000533299	PKN1	Q16512	942 aa		5.68	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 13 ms