RNA–Protein interactions for RNA: ENST00000529006.6

KDM2A-210, Transcript of lysine demethylase 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM2A, Length 6,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-210ENST00000529006 GINS2Q9Y248 185 aa13.8□□□□□ -0.2
KDM2A-210ENST00000529006 SYNJ1O43426 1573 aa13.8□□□□□ -0.2
KDM2A-210ENST00000529006 SLC9C2Q5TAH2 1124 aa13.8□□□□□ -0.2
KDM2A-210ENST00000529006 TMTC2Q8N394 836 aa13.8□□□□□ -0.2
KDM2A-210ENST00000529006 GPHNQ9NQX3 736 aaPredicted RBP13.8□□□□□ -0.2
KDM2A-210ENST00000529006 HS2ST1Q7LGA3 356 aa13.79□□□□□ -0.2
KDM2A-210ENST00000529006 FNBP1Q96RU3 617 aa13.79□□□□□ -0.2
KDM2A-210ENST00000529006 HSPA1LP34931 641 aa13.79□□□□□ -0.2
KDM2A-210ENST00000529006 SEPT6Q14141 434 aa13.79□□□□□ -0.2
KDM2A-210ENST00000529006 PAXBP1Q9Y5B6 917 aa13.79□□□□□ -0.2
KDM2A-210ENST00000529006 RTL9Q8NET4 1388 aa13.79□□□□□ -0.2
KDM2A-210ENST00000529006 CCDC171Q6TFL3 1326 aa13.79□□□□□ -0.2
KDM2A-210ENST00000529006 SMARCA4P51532 1647 aa13.79□□□□□ -0.2
KDM2A-210ENST00000529006 UBAP1LF5GYI3 381 aa13.79□□□□□ -0.2
KDM2A-210ENST00000529006 LPXNO60711 386 aa13.79□□□□□ -0.2
KDM2A-210ENST00000529006 ZC3H12CQ9C0D7 883 aaKnown RBP13.79□□□□□ -0.2
KDM2A-210ENST00000529006 NYXQ9GZU5 481 aa13.79□□□□□ -0.2
KDM2A-210ENST00000529006 CCDC169A6NNP5 214 aa13.79□□□□□ -0.2
KDM2A-210ENST00000529006 CIB2O75838 187 aa13.79□□□□□ -0.2
KDM2A-210ENST00000529006 NKTRP30414 1462 aaKnown RBP13.79□□□□□ -0.2
KDM2A-210ENST00000529006 ARAP1Q96P48 1450 aa13.79□□□□□ -0.2
KDM2A-210ENST00000529006 SLC8A3P57103 927 aa13.79□□□□□ -0.2
KDM2A-210ENST00000529006 TMOD4Q9NZQ9 345 aa13.79□□□□□ -0.2
KDM2A-210ENST00000529006 ZEB2O60315 1214 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 ZSCAN22P10073 491 aaPredicted RBP13.78□□□□□ -0.2
KDM2A-210ENST00000529006 SYT1P21579 422 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 INF2Q27J81 1249 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 ZSCAN23Q3MJ62 389 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 ZNF710Q8N1W2 664 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 ZCRB1Q8TBF4 217 aaKnown RBP13.78□□□□□ -0.2
KDM2A-210ENST00000529006 KCNG4Q8TDN1 519 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 FRMD4BQ9Y2L6 1034 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 HCLS1P14317 486 aaPredicted RBP13.78□□□□□ -0.2
KDM2A-210ENST00000529006 CEP57Q86XR8 500 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 MICALL1Q8N3F8 863 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 PICK1Q9NRD5 415 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 GTPBP4Q9BZE4 634 aaKnown RBP13.78□□□□□ -0.2
KDM2A-210ENST00000529006 BICDL2A1A5D9 508 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 FAM160A1Q05DH4 1040 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 XAGE3Q8WTP9 111 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 LEO1Q8WVC0 666 aaPredicted RBP13.78□□□□□ -0.2
KDM2A-210ENST00000529006 TRIM6Q9C030 488 aaPredicted RBP13.78□□□□□ -0.2
KDM2A-210ENST00000529006 KRT83P78385 493 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 SLC39A6Q13433 755 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 NBPF14Q5TI25 921 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 GPCPD1Q9NPB8 672 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 AFG3L2Q9Y4W6 797 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 RTL1A6NKG5 1358 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 CPLX4Q7Z7G2 160 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 CCDC42Q96M95 316 aa13.78□□□□□ -0.2
KDM2A-210ENST00000529006 NSFL1CQ9UNZ2 370 aaKnown RBP13.78□□□□□ -0.2
KDM2A-210ENST00000529006 RXRAP19793 462 aa13.77□□□□□ -0.2
KDM2A-210ENST00000529006 TTC22Q5TAA0 569 aa13.77□□□□□ -0.2
KDM2A-210ENST00000529006 STX10O60499 249 aa13.77□□□□□ -0.2
KDM2A-210ENST00000529006 PRKG1Q13976 671 aa13.77□□□□□ -0.2
KDM2A-210ENST00000529006 PSMD6Q15008 389 aa13.77□□□□□ -0.2
KDM2A-210ENST00000529006 MCMDC2Q4G0Z9 681 aa13.77□□□□□ -0.2
KDM2A-210ENST00000529006 MRPS27Q92552 414 aaKnown RBP13.77□□□□□ -0.2
KDM2A-210ENST00000529006 TACC3Q9Y6A5 838 aa13.77□□□□□ -0.2
KDM2A-210ENST00000529006 WASLO00401 505 aaPredicted RBP13.77□□□□□ -0.21
KDM2A-210ENST00000529006 TBC1D2Q9BYX2 928 aa13.77□□□□□ -0.21
KDM2A-210ENST00000529006 CACYBPQ9HB71 228 aaKnown RBP13.77□□□□□ -0.21
KDM2A-210ENST00000529006 MTRF1LQ9UGC7 380 aaKnown RBP13.77□□□□□ -0.21
KDM2A-210ENST00000529006 SKILP12757 684 aa13.77□□□□□ -0.21
KDM2A-210ENST00000529006 MAEAQ7L5Y9 396 aa13.77□□□□□ -0.21
KDM2A-210ENST00000529006 HELBQ8NG08 1087 aaPredicted RBP13.77□□□□□ -0.21
KDM2A-210ENST00000529006 TBC1D31Q96DN5 1066 aa13.77□□□□□ -0.21
KDM2A-210ENST00000529006 RHOXF2BP0C7M4 288 aa13.77□□□□□ -0.21
KDM2A-210ENST00000529006 SETDB1Q15047 1291 aa13.77□□□□□ -0.21
KDM2A-210ENST00000529006 CEP85LQ5SZL2 805 aa13.77□□□□□ -0.21
KDM2A-210ENST00000529006 RHOXF2Q9BQY4 288 aa13.77□□□□□ -0.21
KDM2A-210ENST00000529006 LZTFL1Q9NQ48 299 aa13.77□□□□□ -0.21
KDM2A-210ENST00000529006 DDX39AO00148 427 aaKnown RBP13.76□□□□□ -0.21
KDM2A-210ENST00000529006 ERCC3P19447 782 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 RSPH3Q86UC2 560 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 GTF2A1P52655 376 aaPredicted RBP13.76□□□□□ -0.21
KDM2A-210ENST00000529006 TRPC3Q13507 836 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 ZYXQ15942 572 aaKnown RBP13.76□□□□□ -0.21
KDM2A-210ENST00000529006 DNAJC25Q9H1X3 360 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 ARFGAP3Q9NP61 516 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 DZIP3Q86Y13 1208 aaKnown RBP13.76□□□□□ -0.21
KDM2A-210ENST00000529006 SARNPP82979 210 aaKnown RBP13.76□□□□□ -0.21
KDM2A-210ENST00000529006 ITIH3Q06033 890 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 ZNF569Q5MCW4 686 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 ZKSCAN3Q9BRR0 538 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 BEGAINQ9BUH8 593 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 MBIPQ9NS73 344 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 RBM8AQ9Y5S9 174 aaKnown RBP13.76□□□□□ -0.21
KDM2A-210ENST00000529006 KRT86O43790 486 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 TRIM27P14373 513 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 GSDMBQ8TAX9 411 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 KIFAP3Q92845 792 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 VPS18Q9P253 973 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 MTUS1Q9ULD2 1270 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 GRIN2BQ13224 1484 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 TRIM75PA6NK02 468 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 ZFYP08048 801 aaPredicted RBP13.76□□□□□ -0.21
KDM2A-210ENST00000529006 MYCLP12524 364 aaPredicted RBP13.76□□□□□ -0.21
KDM2A-210ENST00000529006 CTNND2Q9UQB3 1225 aa13.76□□□□□ -0.21
KDM2A-210ENST00000529006 ABCC11Q96J66 1382 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms