RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 IQCA1LA6NCM1 817 aa9.63□□□□□ -0.87
SSBP3-211ENST00000528787 NFKBIEO00221 500 aa9.63□□□□□ -0.87
SSBP3-211ENST00000528787 LDHCP07864 332 aa9.63□□□□□ -0.87
SSBP3-211ENST00000528787 ZFYP08048 801 aaPredicted RBP9.63□□□□□ -0.87
SSBP3-211ENST00000528787 YBX3P16989 372 aaKnown RBP eCLIP9.63□□□□□ -0.87
SSBP3-211ENST00000528787 GYG1P46976 350 aa9.63□□□□□ -0.87
SSBP3-211ENST00000528787 MAP3K12Q12852 859 aa9.63□□□□□ -0.87
SSBP3-211ENST00000528787 TTLL5Q6EMB2 1281 aa9.63□□□□□ -0.87
SSBP3-211ENST00000528787 CIAPIN1Q6FI81 312 aa9.63□□□□□ -0.87
SSBP3-211ENST00000528787 GPC2Q8N158 579 aa9.63□□□□□ -0.87
SSBP3-211ENST00000528787 AGBL3Q8NEM8 1001 aa9.63□□□□□ -0.87
SSBP3-211ENST00000528787 DBNDD2Q9BQY9 259 aa9.63□□□□□ -0.87
SSBP3-211ENST00000528787 NOL10Q9BSC4 688 aaKnown RBP9.63□□□□□ -0.87
SSBP3-211ENST00000528787 CCDC8Q9H0W5 538 aaPredicted RBP9.63□□□□□ -0.87
SSBP3-211ENST00000528787 DBNLQ9UJU6 430 aaKnown RBP9.63□□□□□ -0.87
SSBP3-211ENST00000528787 TIAM2Q8IVF5 1701 aa9.62□□□□□ -0.87
SSBP3-211ENST00000528787 FZD9O00144 591 aa9.62□□□□□ -0.87
SSBP3-211ENST00000528787 MAP4K4O95819 1239 aaPredicted RBP9.62□□□□□ -0.87
SSBP3-211ENST00000528787 LMOD1P29536 600 aaPredicted RBP9.62□□□□□ -0.87
SSBP3-211ENST00000528787 BCAMP50895 628 aa9.62□□□□□ -0.87
SSBP3-211ENST00000528787 PDE1AP54750 535 aa9.62□□□□□ -0.87
SSBP3-211ENST00000528787 ERICH6Q7L0X2 663 aa9.62□□□□□ -0.87
SSBP3-211ENST00000528787 EVI5LQ96CN4 794 aa9.62□□□□□ -0.87
SSBP3-211ENST00000528787 HAUS7Q99871 368 aa9.62□□□□□ -0.87
SSBP3-211ENST00000528787 MRIQ9BWK5 157 aa9.62□□□□□ -0.87
SSBP3-211ENST00000528787 LRP2BPQ9P2M1 347 aa9.62□□□□□ -0.87
SSBP3-211ENST00000528787 WWC3Q9ULE0 1092 aa9.62□□□□□ -0.87
SSBP3-211ENST00000528787 RFX7Q2KHR2 1363 aa9.62□□□□□ -0.87
SSBP3-211ENST00000528787 IRS2Q9Y4H2 1338 aa9.61□□□□□ -0.87
SSBP3-211ENST00000528787 MYO1BO43795 1136 aa9.61□□□□□ -0.87
SSBP3-211ENST00000528787 SMARCA5O60264 1052 aaPredicted RBP9.61□□□□□ -0.87
SSBP3-211ENST00000528787 LDHBP07195 334 aaKnown RBP9.61□□□□□ -0.87
SSBP3-211ENST00000528787 MFAP1P55081 439 aaKnown RBP9.61□□□□□ -0.87
SSBP3-211ENST00000528787 HDLBPQ00341 1268 aaKnown RBP9.61□□□□□ -0.87
SSBP3-211ENST00000528787 MFSD14BQ5SR56 506 aa9.61□□□□□ -0.87
SSBP3-211ENST00000528787 C9orf131Q5VYM1 1079 aa9.61□□□□□ -0.87
SSBP3-211ENST00000528787 DZIP1Q86YF9 867 aaKnown RBP9.61□□□□□ -0.87
SSBP3-211ENST00000528787 DPF2Q92785 391 aa9.61□□□□□ -0.87
SSBP3-211ENST00000528787 FBXW7Q969H0 707 aa9.61□□□□□ -0.87
SSBP3-211ENST00000528787 BCL11AQ9H165 835 aa9.61□□□□□ -0.87
SSBP3-211ENST00000528787 DBNDD1Q9H9R9 158 aa9.61□□□□□ -0.87
SSBP3-211ENST00000528787 PAG1Q9NWQ8 432 aa9.61□□□□□ -0.87
SSBP3-211ENST00000528787 MYH7P12883 1935 aa9.6□□□□□ -0.87
SSBP3-211ENST00000528787 H7C1D1 291 aa9.6□□□□□ -0.87
SSBP3-211ENST00000528787 BAG3O95817 575 aa9.6□□□□□ -0.87
SSBP3-211ENST00000528787 VIL1P09327 827 aaKnown RBP9.6□□□□□ -0.87
SSBP3-211ENST00000528787 PLCG2P16885 1265 aa9.6□□□□□ -0.87
SSBP3-211ENST00000528787 ADORA1P30542 326 aa9.6□□□□□ -0.87
SSBP3-211ENST00000528787 PHKA1P46020 1223 aa9.6□□□□□ -0.87
SSBP3-211ENST00000528787 GTF2IP78347 998 aa9.6□□□□□ -0.87
SSBP3-211ENST00000528787 RASSF7Q02833 373 aa9.6□□□□□ -0.87
SSBP3-211ENST00000528787 RASGRF1Q13972 1273 aa9.6□□□□□ -0.87
SSBP3-211ENST00000528787 DOK7Q18PE1 504 aa9.6□□□□□ -0.87
SSBP3-211ENST00000528787 RSBN1LQ6PCB5 846 aaPredicted RBP9.6□□□□□ -0.87
SSBP3-211ENST00000528787 OLFM4Q6UX06 510 aa9.6□□□□□ -0.87
SSBP3-211ENST00000528787 RUFY2Q8WXA3 655 aa9.6□□□□□ -0.87
SSBP3-211ENST00000528787 SCN4AP35499 1836 aa9.6□□□□□ -0.87
SSBP3-211ENST00000528787 COL4A1P02462 1669 aa9.6□□□□□ -0.87
SSBP3-211ENST00000528787 AKAP11Q9UKA4 1901 aa9.59□□□□□ -0.87
SSBP3-211ENST00000528787 TRIM6-TRIM34B2RNG4 842 aa9.59□□□□□ -0.87
SSBP3-211ENST00000528787 USP17L8P0C7I0 530 aa9.59□□□□□ -0.87
SSBP3-211ENST00000528787 CHAF1AQ13111 956 aaPredicted RBP9.59□□□□□ -0.87
SSBP3-211ENST00000528787 BMP2KLQ5H9B9 411 aa9.59□□□□□ -0.87
SSBP3-211ENST00000528787 PLEKHM2Q8IWE5 1019 aa9.59□□□□□ -0.87
SSBP3-211ENST00000528787 TEKT1Q969V4 418 aa9.59□□□□□ -0.87
SSBP3-211ENST00000528787 DDRGK1Q96HY6 314 aa9.59□□□□□ -0.87
SSBP3-211ENST00000528787 DNAJC2Q99543 621 aaKnown RBP9.59□□□□□ -0.87
SSBP3-211ENST00000528787 HMG20BQ9P0W2 317 aa9.59□□□□□ -0.87
SSBP3-211ENST00000528787 ABCF2Q9UG63 623 aa9.59□□□□□ -0.87
SSBP3-211ENST00000528787 MAST2Q6P0Q8 1798 aa9.59□□□□□ -0.87
SSBP3-211ENST00000528787 SALL3Q9BXA9 1300 aa9.58□□□□□ -0.88
SSBP3-211ENST00000528787 GLTPD2A6NH11 291 aa9.58□□□□□ -0.88
SSBP3-211ENST00000528787 MCAMP43121 646 aa9.58□□□□□ -0.88
SSBP3-211ENST00000528787 CXCL9Q07325 125 aa9.58□□□□□ -0.88
SSBP3-211ENST00000528787 DACT2Q5SW24 774 aa9.58□□□□□ -0.88
SSBP3-211ENST00000528787 TTC22Q5TAA0 569 aa9.58□□□□□ -0.88
SSBP3-211ENST00000528787 PNMA8AQ86V59 439 aaPredicted RBP9.58□□□□□ -0.88
SSBP3-211ENST00000528787 TXNRD3Q86VQ6 643 aa9.58□□□□□ -0.88
SSBP3-211ENST00000528787 KBTBD3Q8NAB2 608 aa9.58□□□□□ -0.88
SSBP3-211ENST00000528787 FSD1Q9BTV5 496 aa9.58□□□□□ -0.88
SSBP3-211ENST00000528787 BOLA2Q9H3K6 86 aa9.58□□□□□ -0.88
SSBP3-211ENST00000528787 TMOD2Q9NZR1 351 aa9.58□□□□□ -0.88
SSBP3-211ENST00000528787 RAI14Q9P0K7 980 aa9.58□□□□□ -0.88
SSBP3-211ENST00000528787 SERPINA10Q9UK55 444 aa9.58□□□□□ -0.88
SSBP3-211ENST00000528787 DOCK2Q92608 1830 aa9.57□□□□□ -0.88
SSBP3-211ENST00000528787 GOLIM4O00461 696 aa9.57□□□□□ -0.88
SSBP3-211ENST00000528787 PSMD14O00487 310 aa9.57□□□□□ -0.88
SSBP3-211ENST00000528787 IDH1O75874 414 aaKnown RBP9.57□□□□□ -0.88
SSBP3-211ENST00000528787 RAD17O75943 681 aa9.57□□□□□ -0.88
SSBP3-211ENST00000528787 KLRK1P26718 216 aa9.57□□□□□ -0.88
SSBP3-211ENST00000528787 UBE3CQ15386 1083 aa9.57□□□□□ -0.88
SSBP3-211ENST00000528787 NAA16Q6N069 864 aaPredicted RBP9.57□□□□□ -0.88
SSBP3-211ENST00000528787 HHIPL2Q6UWX4 724 aa9.57□□□□□ -0.88
SSBP3-211ENST00000528787 PI4K2BQ8TCG2 481 aa9.57□□□□□ -0.88
SSBP3-211ENST00000528787 L3MBTL3Q96JM7 780 aaPredicted RBP9.57□□□□□ -0.88
SSBP3-211ENST00000528787 TLR7Q9NYK1 1049 aaKnown RBP9.57□□□□□ -0.88
SSBP3-211ENST00000528787 TAOK2Q9UL54 1235 aa9.57□□□□□ -0.88
SSBP3-211ENST00000528787 TTF2Q9UNY4 1162 aaKnown RBP9.57□□□□□ -0.88
SSBP3-211ENST00000528787 GJA3Q9Y6H8 435 aa9.57□□□□□ -0.88
SSBP3-211ENST00000528787 MYH2Q9UKX2 1941 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms