RNA–Protein interactions for RNA: ENST00000524384.5

PTP4A2-208, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 5

Gene PTP4A2, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-208	ENST00000524384	PRAMEF18	Q5VWM3	479 aa		10.87	□□□□□ -0.67
PTP4A2-208	ENST00000524384	MCM10	Q7L590	875 aa		10.87	□□□□□ -0.67
PTP4A2-208	ENST00000524384	PHACTR3	Q96KR7	559 aa		10.87	□□□□□ -0.67
PTP4A2-208	ENST00000524384	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.87	□□□□□ -0.67
PTP4A2-208	ENST00000524384	SCAF8	Q9UPN6	1271 aa	Known RBP	10.87	□□□□□ -0.67
PTP4A2-208	ENST00000524384	RRP7A	Q9Y3A4	280 aa	Known RBP	10.87	□□□□□ -0.67
PTP4A2-208	ENST00000524384	PCDHGA10	Q9Y5H3	936 aa		10.87	□□□□□ -0.67
PTP4A2-208	ENST00000524384	COL3A1	P02461	1466 aa	Predicted RBP	10.87	□□□□□ -0.67
PTP4A2-208	ENST00000524384	PPP1R3G	B7ZBB8	358 aa		10.86	□□□□□ -0.67
PTP4A2-208	ENST00000524384	C6orf229	H3BNL8	230 aa		10.86	□□□□□ -0.67
PTP4A2-208	ENST00000524384	HCLS1	P14317	486 aa	Predicted RBP	10.86	□□□□□ -0.67
PTP4A2-208	ENST00000524384	MYL6B	P14649	208 aa		10.86	□□□□□ -0.67
PTP4A2-208	ENST00000524384	PTPN12	Q05209	780 aa	Known RBP	10.86	□□□□□ -0.67
PTP4A2-208	ENST00000524384	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.86	□□□□□ -0.67
PTP4A2-208	ENST00000524384	SPRYD7	Q5W111	196 aa		10.86	□□□□□ -0.67
PTP4A2-208	ENST00000524384	CD99L2	Q8TCZ2	262 aa		10.86	□□□□□ -0.67
PTP4A2-208	ENST00000524384	EFCC1	Q9HA90	598 aa		10.86	□□□□□ -0.67
PTP4A2-208	ENST00000524384	POLL	Q9UGP5	575 aa		10.86	□□□□□ -0.67
PTP4A2-208	ENST00000524384	KDM3B	Q7LBC6	1761 aa		10.85	□□□□□ -0.67
PTP4A2-208	ENST00000524384	NF2	P35240	595 aa		10.85	□□□□□ -0.67
PTP4A2-208	ENST00000524384	INHBE	P58166	350 aa		10.85	□□□□□ -0.67
PTP4A2-208	ENST00000524384	SLC4A8	Q2Y0W8	1093 aa		10.85	□□□□□ -0.67
PTP4A2-208	ENST00000524384	AGBL3	Q8NEM8	1001 aa		10.85	□□□□□ -0.67
PTP4A2-208	ENST00000524384	RTF1	Q92541	710 aa	Known RBP	10.85	□□□□□ -0.67
PTP4A2-208	ENST00000524384	NECTIN2	Q92692	538 aa		10.85	□□□□□ -0.67
PTP4A2-208	ENST00000524384	PRO3102	Q9H379	93 aa		10.85	□□□□□ -0.67
PTP4A2-208	ENST00000524384	MYOZ2	Q9NPC6	264 aa		10.85	□□□□□ -0.67
PTP4A2-208	ENST00000524384	MANSC4	A6NHS7	340 aa	Predicted RBP	10.84	□□□□□ -0.67
PTP4A2-208	ENST00000524384	PRKAR2B	P31323	418 aa		10.84	□□□□□ -0.67
PTP4A2-208	ENST00000524384	GPSM2	P81274	684 aa		10.84	□□□□□ -0.67
PTP4A2-208	ENST00000524384	SLC9C1	Q4G0N8	1177 aa		10.84	□□□□□ -0.67
PTP4A2-208	ENST00000524384	TYW1B	Q6NUM6	668 aa		10.84	□□□□□ -0.67
PTP4A2-208	ENST00000524384	NBPF11	Q86T75	865 aa		10.84	□□□□□ -0.67
PTP4A2-208	ENST00000524384	FBXW7	Q969H0	707 aa		10.84	□□□□□ -0.67
PTP4A2-208	ENST00000524384	EYA3	Q99504	573 aa		10.84	□□□□□ -0.67
PTP4A2-208	ENST00000524384	IGF2BP3	O00425	579 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
PTP4A2-208	ENST00000524384	SOX1	O00570	391 aa	Predicted RBP	10.83	□□□□□ -0.68
PTP4A2-208	ENST00000524384	USP17L8	P0C7I0	530 aa		10.83	□□□□□ -0.68
PTP4A2-208	ENST00000524384	CAP1	Q01518	475 aa		10.83	□□□□□ -0.68
PTP4A2-208	ENST00000524384	CRHR2	Q13324	411 aa		10.83	□□□□□ -0.68
PTP4A2-208	ENST00000524384	DCTN1	Q14203	1278 aa		10.83	□□□□□ -0.68
PTP4A2-208	ENST00000524384	PROX2	Q3B8N5	592 aa		10.83	□□□□□ -0.68
PTP4A2-208	ENST00000524384	LDLRAD1	Q5T700	205 aa		10.83	□□□□□ -0.68
PTP4A2-208	ENST00000524384	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.83	□□□□□ -0.68
PTP4A2-208	ENST00000524384	ARMC9	Q7Z3E5	817 aa		10.83	□□□□□ -0.68
PTP4A2-208	ENST00000524384	DPF3	Q92784	378 aa		10.83	□□□□□ -0.68
PTP4A2-208	ENST00000524384	MIS18A	Q9NYP9	233 aa		10.83	□□□□□ -0.68
PTP4A2-208	ENST00000524384	LAMB1	P07942	1786 aa		10.82	□□□□□ -0.68
PTP4A2-208	ENST00000524384	PSME4	Q14997	1843 aa		10.82	□□□□□ -0.68
PTP4A2-208	ENST00000524384	MYC	P01106	439 aa	Predicted RBP	10.82	□□□□□ -0.68
PTP4A2-208	ENST00000524384	SP3	Q02447	781 aa		10.82	□□□□□ -0.68
PTP4A2-208	ENST00000524384	PRKG1	Q13976	671 aa		10.82	□□□□□ -0.68
PTP4A2-208	ENST00000524384	TAF7	Q15545	349 aa	Predicted RBP	10.82	□□□□□ -0.68
PTP4A2-208	ENST00000524384	TBC1D16	Q8TBP0	767 aa		10.82	□□□□□ -0.68
PTP4A2-208	ENST00000524384	GML	Q99445	158 aa		10.82	□□□□□ -0.68
PTP4A2-208	ENST00000524384	COL25A1	Q9BXS0	654 aa	Predicted RBP	10.82	□□□□□ -0.68
PTP4A2-208	ENST00000524384	RABGEF1	Q9UJ41	708 aa		10.82	□□□□□ -0.68
PTP4A2-208	ENST00000524384	LAMA3	Q16787	3333 aa		10.82	□□□□□ -0.68
PTP4A2-208	ENST00000524384		A0A1W2PPC1	479 aa		10.81	□□□□□ -0.68
PTP4A2-208	ENST00000524384	WTIP	A6NIX2	430 aa	Predicted RBP	10.81	□□□□□ -0.68
PTP4A2-208	ENST00000524384	ZBTB48	P10074	688 aa	Predicted RBP	10.81	□□□□□ -0.68
PTP4A2-208	ENST00000524384	NBPF9	Q3BBW0	867 aa		10.81	□□□□□ -0.68
PTP4A2-208	ENST00000524384	ANKK1	Q8NFD2	765 aa		10.81	□□□□□ -0.68
PTP4A2-208	ENST00000524384	CELF1	Q92879	486 aa	Known RBP	10.81	□□□□□ -0.68
PTP4A2-208	ENST00000524384	LRCH3	Q96II8	777 aa		10.81	□□□□□ -0.68
PTP4A2-208	ENST00000524384	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.81	□□□□□ -0.68
PTP4A2-208	ENST00000524384	RSPH6A	Q9H0K4	717 aa		10.81	□□□□□ -0.68
PTP4A2-208	ENST00000524384	PTCH2	Q9Y6C5	1203 aa		10.81	□□□□□ -0.68
PTP4A2-208	ENST00000524384	SH3TC1	Q8TE82	1336 aa		10.81	□□□□□ -0.68
PTP4A2-208	ENST00000524384	COL4A1	P02462	1669 aa		10.8	□□□□□ -0.68
PTP4A2-208	ENST00000524384	COL9A1	P20849	921 aa		10.8	□□□□□ -0.68
PTP4A2-208	ENST00000524384	NLRP10	Q86W26	655 aa		10.8	□□□□□ -0.68
PTP4A2-208	ENST00000524384	SLC10A4	Q96EP9	437 aa		10.8	□□□□□ -0.68
PTP4A2-208	ENST00000524384	TRMT112	Q9UI30	125 aa	Known RBP	10.8	□□□□□ -0.68
PTP4A2-208	ENST00000524384	ANGEL1	Q9UNK9	670 aa	Known RBP	10.8	□□□□□ -0.68
PTP4A2-208	ENST00000524384	ERBB4	Q15303	1308 aa		10.8	□□□□□ -0.68
PTP4A2-208	ENST00000524384	DPYSL4	O14531	572 aa		10.79	□□□□□ -0.68
PTP4A2-208	ENST00000524384	HTATSF1	O43719	755 aa	Known RBP	10.79	□□□□□ -0.68
PTP4A2-208	ENST00000524384	OTUD7B	Q6GQQ9	843 aa		10.79	□□□□□ -0.68
PTP4A2-208	ENST00000524384	LRP10	Q7Z4F1	713 aa		10.79	□□□□□ -0.68
PTP4A2-208	ENST00000524384	WNK4	Q96J92	1243 aa		10.79	□□□□□ -0.68
PTP4A2-208	ENST00000524384	UNC80	Q8N2C7	3258 aa		10.79	□□□□□ -0.68
PTP4A2-208	ENST00000524384	WNT10B	O00744	389 aa		10.78	□□□□□ -0.68
PTP4A2-208	ENST00000524384	UFL1	O94874	794 aa		10.78	□□□□□ -0.68
PTP4A2-208	ENST00000524384	EIF4A1	P60842	406 aa	Known RBP	10.78	□□□□□ -0.68
PTP4A2-208	ENST00000524384	ARHGEF6	Q15052	776 aa		10.78	□□□□□ -0.68
PTP4A2-208	ENST00000524384	CC2D1B	Q5T0F9	858 aa	Known RBP	10.78	□□□□□ -0.68
PTP4A2-208	ENST00000524384	SHISA4	Q96DD7	197 aa		10.78	□□□□□ -0.68
PTP4A2-208	ENST00000524384	THUMPD2	Q9BTF0	503 aa	Known RBP	10.78	□□□□□ -0.68
PTP4A2-208	ENST00000524384	PODXL2	Q9NZ53	605 aa		10.78	□□□□□ -0.68
PTP4A2-208	ENST00000524384	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.78	□□□□□ -0.68
PTP4A2-208	ENST00000524384	FZD1	Q9UP38	647 aa		10.78	□□□□□ -0.68
PTP4A2-208	ENST00000524384	NR2E3	Q9Y5X4	410 aa		10.78	□□□□□ -0.68
PTP4A2-208	ENST00000524384	USP17L3	A6NCW0	530 aa		10.77	□□□□□ -0.69
PTP4A2-208	ENST00000524384	USP17L4	A6NCW7	530 aa		10.77	□□□□□ -0.69
PTP4A2-208	ENST00000524384	SF3B3	Q15393	1217 aa	Known RBP	10.77	□□□□□ -0.69
PTP4A2-208	ENST00000524384	HSP90AB3P	Q58FF7	597 aa		10.77	□□□□□ -0.69
PTP4A2-208	ENST00000524384	USP17L1	Q7RTZ2	530 aa		10.77	□□□□□ -0.69
PTP4A2-208	ENST00000524384	PNISR	Q8TF01	805 aa	Known RBP	10.77	□□□□□ -0.69
PTP4A2-208	ENST00000524384	SH3TC2	Q8TF17	1288 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms