RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 RSRC2Q7L4I2 434 aaKnown RBP11.1□□□□□ -0.63
CTNNA1-230ENST00000521724 EIF3CQ99613 913 aaKnown RBP11.1□□□□□ -0.63
CTNNA1-230ENST00000521724 BPIFA3Q9BQP9 254 aa11.1□□□□□ -0.63
CTNNA1-230ENST00000521724 SETD1BQ9UPS6 1966 aaKnown RBP11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 UBR1Q8IWV7 1749 aa11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 PXDNLA1KZ92 1463 aa11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 A0A1B0GVL5 298 aa11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 FANCCQ00597 558 aa11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 FMR1NBQ8N0W7 255 aaPredicted RBP11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 MRPS27Q92552 414 aaKnown RBP11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 GOLGA1Q92805 767 aa11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 LGR6Q9HBX8 967 aa11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 PDE11AQ9HCR9 933 aa11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 HMG20BQ9P0W2 317 aa11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 FAM208AQ9UK61 1670 aaKnown RBP11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 A0A0D9SFI3 127 aa11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 VWA3AA6NCI4 1184 aa11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 TAF7Q15545 349 aaPredicted RBP11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 PPM1EQ8WY54 764 aa11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 WDR24Q96S15 920 aa11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 SIL1Q9H173 461 aa11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 MRFAP1Q9Y605 127 aa11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 NPHP4O75161 1426 aaPredicted RBP11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 MYH15Q9Y2K3 1946 aa11.09□□□□□ -0.63
CTNNA1-230ENST00000521724 MAP2K7O14733 419 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 TXLNAP40222 546 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 APOBRQ0VD83 1088 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 HDGFL1Q5TGJ6 251 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 FOXR1Q6PIV2 292 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 AACSQ86V21 672 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 ERC1Q8IUD2 1116 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 GPATCH11Q8N954 259 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 FSD1Q9BTV5 496 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 PPP2R2CQ9Y2T4 447 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 FMN2Q9NZ56 1722 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 SERPINC1P01008 464 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 UBASH3AP57075 661 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 IRF5Q13568 498 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 BRD3Q15059 726 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 CFAP100Q494V2 611 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 ATL3Q6DD88 541 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 NAA16Q6N069 864 aaPredicted RBP11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 Q6ZUG5 572 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 NWD1Q149M9 1564 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 EIF3JO75822 258 aaKnown RBP11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 ATP1A3P13637 1013 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 ATP2B1P20020 1258 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 NDUFA8P51970 172 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 KRT32Q14532 448 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 FCHSD1Q86WN1 690 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 RETREG2Q8NC44 543 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 NEK1Q96PY6 1258 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 ZSWIM4Q9H7M6 989 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 PCDHA7Q9UN72 937 aa11.08□□□□□ -0.64
CTNNA1-230ENST00000521724 PLEKHG1Q9ULL1 1385 aa11.07□□□□□ -0.64
CTNNA1-230ENST00000521724 N4BP2Q86UW6 1770 aaPredicted RBP11.07□□□□□ -0.64
CTNNA1-230ENST00000521724 ARHGAP6O43182 974 aa11.07□□□□□ -0.64
CTNNA1-230ENST00000521724 SLC3A2P08195 630 aaKnown RBP11.07□□□□□ -0.64
CTNNA1-230ENST00000521724 GOLGA8FQ08AF8 430 aa11.07□□□□□ -0.64
CTNNA1-230ENST00000521724 GOLGA8DPQ0D2H9 430 aa11.07□□□□□ -0.64
CTNNA1-230ENST00000521724 SCRN1Q12765 414 aa11.07□□□□□ -0.64
CTNNA1-230ENST00000521724 NCAPHQ15003 741 aa11.07□□□□□ -0.64
CTNNA1-230ENST00000521724 TSGA10IPQ3SY00 556 aa11.07□□□□□ -0.64
CTNNA1-230ENST00000521724 HDXQ7Z353 690 aa11.07□□□□□ -0.64
CTNNA1-230ENST00000521724 MKRN1Q9UHC7 482 aaKnown RBP11.07□□□□□ -0.64
CTNNA1-230ENST00000521724 GOLGA6L9A6NEM1 432 aa11.07□□□□□ -0.64
CTNNA1-230ENST00000521724 TOP1P11387 765 aaKnown RBP11.07□□□□□ -0.64
CTNNA1-230ENST00000521724 MMP14P50281 582 aa11.07□□□□□ -0.64
CTNNA1-230ENST00000521724 MKRN4PQ13434 485 aaPredicted RBP11.07□□□□□ -0.64
CTNNA1-230ENST00000521724 SF3A1Q15459 793 aaKnown RBP11.07□□□□□ -0.64
CTNNA1-230ENST00000521724 ADALQ6DHV7 355 aa11.07□□□□□ -0.64
CTNNA1-230ENST00000521724 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.07□□□□□ -0.64
CTNNA1-230ENST00000521724 PIK3C2AO00443 1686 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 ANKRD65E5RJM6 399 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 CBFA2T2O43439 604 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 RPS6KA5O75582 802 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 NLRP12P59046 1061 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 SART3Q15020 963 aaKnown RBP11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 ISM2Q6H9L7 571 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 ZNF589Q86UQ0 364 aaPredicted RBP11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 RNF25Q96BH1 459 aaPredicted RBP11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 DHX58Q96C10 678 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 CHPF2Q9P2E5 772 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 HDAC5Q9UQL6 1122 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 PI4KAP2A4QPH2 592 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 CORO7P57737 925 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 GUCY1B3Q02153 619 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 HSP90B2PQ58FF3 399 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 PI4KAP1Q8N8J0 262 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 SMARCC2Q8TAQ2 1214 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 LLPHQ9BRT6 129 aaKnown RBP11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 LRRC2Q9BYS8 371 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 BOLA2Q9H3K6 86 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 SNRKQ9NRH2 765 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 PA2G4Q9UQ80 394 aaKnown RBP11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 FAN1Q9Y2M0 1017 aa11.06□□□□□ -0.64
CTNNA1-230ENST00000521724 N4BP1O75113 896 aaKnown RBP11.05□□□□□ -0.64
CTNNA1-230ENST00000521724 PPFIA3O75145 1194 aa11.05□□□□□ -0.64
CTNNA1-230ENST00000521724 APPP05067 770 aa11.05□□□□□ -0.64
CTNNA1-230ENST00000521724 CHMP4BP1P59074 171 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms