RNA–Protein interactions for RNA: ENST00000517790.1

PVT1-205, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 599 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-205ENST00000517790 MAF1Q9H063 256 aa6.73□□□□□ -1.33
PVT1-205ENST00000517790 CCSER2Q9H7U1 834 aa6.73□□□□□ -1.33
PVT1-205ENST00000517790 PCDH12Q9NPG4 1184 aa6.73□□□□□ -1.33
PVT1-205ENST00000517790 METTL5Q9NRN9 209 aaKnown RBP6.73□□□□□ -1.33
PVT1-205ENST00000517790 POLKQ9UBT6 870 aa6.73□□□□□ -1.33
PVT1-205ENST00000517790 DCTN4Q9UJW0 460 aa6.73□□□□□ -1.33
PVT1-205ENST00000517790 TLL2Q9Y6L7 1015 aa6.73□□□□□ -1.33
PVT1-205ENST00000517790 SCN11AQ9UI33 1791 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 COL4A5P29400 1685 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 PPP1R3GB7ZBB8 358 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 USP17L15C9J2P7 530 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 USP17L10C9JJH3 530 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 USP17L13C9JLJ4 530 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 USP17L12C9JPN9 530 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 USP17L11C9JVI0 530 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 USP17L21D6R901 530 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 USP17L18D6R9N7 530 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 USP17L22D6RA61 530 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 USP17L17D6RBQ6 530 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 USP17L19D6RCP7 530 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 USP17L20D6RJB6 530 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 ICMTO60725 284 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 HSP90AB1P08238 724 aaKnown RBP6.72□□□□□ -1.33
PVT1-205ENST00000517790 SRGNP10124 158 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 EPS15P42566 896 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 GOLGA2Q08379 1002 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 USP17L24Q0WX57 530 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 GNL2Q13823 731 aaKnown RBP6.72□□□□□ -1.33
PVT1-205ENST00000517790 PLEKHO1Q53GL0 409 aaPredicted RBP6.72□□□□□ -1.33
PVT1-205ENST00000517790 FAM200AQ8TCP9 573 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 CNKSR1Q969H4 720 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 OSBPL2Q9H1P3 480 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 GABBR1Q9UBS5 961 aa6.72□□□□□ -1.33
PVT1-205ENST00000517790 USP17L3A6NCW0 530 aa6.71□□□□□ -1.34
PVT1-205ENST00000517790 USP17L4A6NCW7 530 aa6.71□□□□□ -1.34
PVT1-205ENST00000517790 FZD9O00144 591 aa6.71□□□□□ -1.34
PVT1-205ENST00000517790 CA12O43570 354 aa6.71□□□□□ -1.34
PVT1-205ENST00000517790 SH3BP5O60239 455 aa6.71□□□□□ -1.34
PVT1-205ENST00000517790 TNNT2P45379 298 aaPredicted RBP6.71□□□□□ -1.34
PVT1-205ENST00000517790 FKBP4Q02790 459 aaKnown RBP eCLIP6.71□□□□□ -1.34
PVT1-205ENST00000517790 CCDC93Q567U6 631 aa6.71□□□□□ -1.34
PVT1-205ENST00000517790 STYK1Q6J9G0 422 aa6.71□□□□□ -1.34
PVT1-205ENST00000517790 USP17L2Q6R6M4 530 aa6.71□□□□□ -1.34
PVT1-205ENST00000517790 TSHZ1Q6ZSZ6 1077 aa6.71□□□□□ -1.34
PVT1-205ENST00000517790 USP17L1Q7RTZ2 530 aa6.71□□□□□ -1.34
PVT1-205ENST00000517790 SAPCD2Q86UD0 394 aa6.71□□□□□ -1.34
PVT1-205ENST00000517790 PLEKHM2Q8IWE5 1019 aa6.71□□□□□ -1.34
PVT1-205ENST00000517790 CCDC146Q8IYE0 955 aa6.71□□□□□ -1.34
PVT1-205ENST00000517790 TMEM87AQ8NBN3 555 aa6.71□□□□□ -1.34
PVT1-205ENST00000517790 KIF12Q96FN5 646 aa6.71□□□□□ -1.34
PVT1-205ENST00000517790 IFT57Q9NWB7 429 aa6.71□□□□□ -1.34
PVT1-205ENST00000517790 ADGRG1Q9Y653 693 aa6.71□□□□□ -1.34
PVT1-205ENST00000517790 GJA3Q9Y6H8 435 aa6.71□□□□□ -1.34
PVT1-205ENST00000517790 CELF2O95319 508 aaKnown RBP6.7□□□□□ -1.34
PVT1-205ENST00000517790 CD46P15529 392 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 SCNN1AP37088 669 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 IARSP41252 1262 aaKnown RBP6.7□□□□□ -1.34
PVT1-205ENST00000517790 SCNN1DP51172 638 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 EIF4G2P78344 907 aaKnown RBP eCLIP6.7□□□□□ -1.343e-6■■■■■ 29.6
PVT1-205ENST00000517790 BMS1Q14692 1282 aaKnown RBP6.7□□□□□ -1.34
PVT1-205ENST00000517790 ECM1Q16610 540 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 SWI5Q1ZZU3 235 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 CRTC2Q53ET0 693 aaPredicted RBP6.7□□□□□ -1.34
PVT1-205ENST00000517790 HABP4Q5JVS0 413 aaKnown RBP6.7□□□□□ -1.34
PVT1-205ENST00000517790 C1orf141Q5JVX7 400 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 ZFYVE27Q5T4F4 411 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 PPP1R18Q6NYC8 613 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 DLK2Q6UY11 383 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 SLC51AQ86UW1 340 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 NUTM1Q86Y26 1132 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 RPUSD2Q8IZ73 545 aaKnown RBP6.7□□□□□ -1.34
PVT1-205ENST00000517790 RGL4Q8IZJ4 473 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 GPC2Q8N158 579 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 SYNE4Q8N205 404 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 CNBD1Q8NA66 436 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 RNF34Q969K3 372 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 MASTLQ96GX5 879 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 LGR6Q9HBX8 967 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 DMGDHQ9UI17 866 aaKnown RBP6.7□□□□□ -1.34
PVT1-205ENST00000517790 SCN7AQ01118 1682 aa6.7□□□□□ -1.34
PVT1-205ENST00000517790 H3BRB1 525 aa6.69□□□□□ -1.34
PVT1-205ENST00000517790 NPHP1O15259 732 aa6.69□□□□□ -1.34
PVT1-205ENST00000517790 HOXA2O43364 376 aa6.69□□□□□ -1.34
PVT1-205ENST00000517790 NEFMP07197 916 aa6.69□□□□□ -1.34
PVT1-205ENST00000517790 NDUFV2P19404 249 aa6.69□□□□□ -1.34
PVT1-205ENST00000517790 EIF5P55010 431 aaKnown RBP6.69□□□□□ -1.34
PVT1-205ENST00000517790 FANCCQ00597 558 aa6.69□□□□□ -1.34
PVT1-205ENST00000517790 CTDSPL2Q05D32 466 aa6.69□□□□□ -1.34
PVT1-205ENST00000517790 PTK7Q13308 1070 aa6.69□□□□□ -1.34
PVT1-205ENST00000517790 C4orf46Q504U0 113 aa6.69□□□□□ -1.34
PVT1-205ENST00000517790 FILIP1Q7Z7B0 1213 aa6.69□□□□□ -1.34
PVT1-205ENST00000517790 RNF135Q8IUD6 432 aa6.69□□□□□ -1.34
PVT1-205ENST00000517790 GLIS2Q9BZE0 524 aaPredicted RBP6.69□□□□□ -1.34
PVT1-205ENST00000517790 ACBD3Q9H3P7 528 aa6.69□□□□□ -1.34
PVT1-205ENST00000517790 TUT1Q9H6E5 874 aaKnown RBP6.69□□□□□ -1.34
PVT1-205ENST00000517790 ZNF408Q9H9D4 720 aa6.69□□□□□ -1.34
PVT1-205ENST00000517790 DDX56Q9NY93 547 aaKnown RBP6.69□□□□□ -1.34
PVT1-205ENST00000517790 PDZRN3Q9UPQ7 1066 aa6.69□□□□□ -1.34
PVT1-205ENST00000517790 BCORQ6W2J9 1755 aa6.69□□□□□ -1.34
PVT1-205ENST00000517790 CUL9Q8IWT3 2517 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms