RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 POLR3GO15318 223 aaPredicted RBP12.46□□□□□ -0.42
PCDHGA1-202ENST00000517417 BMS1Q14692 1282 aaKnown RBP12.46□□□□□ -0.42
PCDHGA1-202ENST00000517417 CCDC181Q5TID7 509 aa12.46□□□□□ -0.42
PCDHGA1-202ENST00000517417 SEPT11Q9NVA2 429 aaKnown RBP12.46□□□□□ -0.42
PCDHGA1-202ENST00000517417 BABAM1Q9NWV8 329 aa12.46□□□□□ -0.42
PCDHGA1-202ENST00000517417 ATP6V1AP38606 617 aa12.46□□□□□ -0.42
PCDHGA1-202ENST00000517417 CDR1P51861 262 aa12.46□□□□□ -0.42
PCDHGA1-202ENST00000517417 NBPF6Q5VWK0 638 aa12.46□□□□□ -0.42
PCDHGA1-202ENST00000517417 NBPF5PQ86XG9 351 aaPredicted RBP12.46□□□□□ -0.42
PCDHGA1-202ENST00000517417 MRPS27Q92552 414 aaKnown RBP12.46□□□□□ -0.42
PCDHGA1-202ENST00000517417 NBPF4Q96M43 638 aa12.46□□□□□ -0.42
PCDHGA1-202ENST00000517417 PRR36Q9H6K5 1346 aa12.45□□□□□ -0.42
PCDHGA1-202ENST00000517417 SETQ01105 290 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA1-202ENST00000517417 MCMDC2Q4G0Z9 681 aa12.45□□□□□ -0.42
PCDHGA1-202ENST00000517417 SPATA31D1Q6ZQQ2 1576 aa12.45□□□□□ -0.42
PCDHGA1-202ENST00000517417 IL15P40933 162 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA1-202ENST00000517417 UTP14CQ5TAP6 766 aaKnown RBP12.45□□□□□ -0.42
PCDHGA1-202ENST00000517417 LGR6Q9HBX8 967 aa12.45□□□□□ -0.42
PCDHGA1-202ENST00000517417 RPAP1Q9BWH6 1393 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA1-202ENST00000517417 PLEKHG3A1L390 1219 aa12.45□□□□□ -0.42
PCDHGA1-202ENST00000517417 APOBRQ0VD83 1088 aa12.45□□□□□ -0.42
PCDHGA1-202ENST00000517417 KLHDC4Q8TBB5 520 aa12.45□□□□□ -0.42
PCDHGA1-202ENST00000517417 TRERF1Q96PN7 1200 aa12.45□□□□□ -0.42
PCDHGA1-202ENST00000517417 PTPDC1A2A3K4 754 aa12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 IP6K1Q92551 441 aa12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 LUC7LQ9NQ29 371 aaKnown RBP12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 SPTLC3Q9NUV7 552 aa12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 TOP1P11387 765 aaKnown RBP12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 RFC4P35249 363 aa12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 ENOX2Q16206 610 aaKnown RBP12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 CCDC129Q6ZRS4 1044 aa12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 TTC14Q96N46 770 aa12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 BEND3Q5T5X7 828 aa12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 TMX1Q9H3N1 280 aa12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 CALCOCO1Q9P1Z2 691 aa12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 NIP7Q9Y221 180 aaKnown RBP eCLIP12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 A0A0D9SFI3 127 aa12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 CYP7A1P22680 504 aa12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 TFCP2Q12800 502 aa12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 ELF2Q15723 593 aa12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 SYT10Q6XYQ8 523 aa12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 ERO1AQ96HE7 468 aa12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 DNAI1Q9UI46 699 aa12.44□□□□□ -0.42
PCDHGA1-202ENST00000517417 ZSCAN12O43309 604 aa12.43□□□□□ -0.42
PCDHGA1-202ENST00000517417 IL2RBP14784 551 aa12.43□□□□□ -0.42
PCDHGA1-202ENST00000517417 TIMM10P62072 90 aa12.43□□□□□ -0.42
PCDHGA1-202ENST00000517417 CCDC152Q4G0S7 254 aa12.43□□□□□ -0.42
PCDHGA1-202ENST00000517417 HSP90AA4PQ58FG1 418 aa12.43□□□□□ -0.42
PCDHGA1-202ENST00000517417 KIAA1328Q86T90 577 aa12.43□□□□□ -0.42
PCDHGA1-202ENST00000517417 RNMTO43148 476 aaKnown RBP12.43□□□□□ -0.42
PCDHGA1-202ENST00000517417 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
PCDHGA1-202ENST00000517417 CWC15Q9P013 229 aaKnown RBP12.43□□□□□ -0.42
PCDHGA1-202ENST00000517417 IFNKQ9P0W0 207 aa12.43□□□□□ -0.42
PCDHGA1-202ENST00000517417 IDEP14735 1019 aa12.43□□□□□ -0.42
PCDHGA1-202ENST00000517417 EIF4A1P60842 406 aaKnown RBP12.43□□□□□ -0.42
PCDHGA1-202ENST00000517417 UBA5Q9GZZ9 404 aa12.43□□□□□ -0.42
PCDHGA1-202ENST00000517417 PAG1Q9NWQ8 432 aa12.43□□□□□ -0.42
PCDHGA1-202ENST00000517417 UQCRFS1P1P0C7P4 283 aa12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 GTF2F1P35269 517 aaKnown RBP eCLIP12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 FAM160A1Q05DH4 1040 aa12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 GABPB1Q06547 395 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 SUCLG2Q96I99 432 aa12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 IL25Q9H293 177 aa12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 DDB1Q16531 1140 aa12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 ELP1O95163 1332 aa12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 ZBTB43O43298 467 aa12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 KCNQ3O43525 872 aa12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 POLA2Q14181 598 aa12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 ANKRD18AQ8IVF6 992 aa12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 TDRD7Q8NHU6 1098 aaKnown RBP12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 DCAF5Q96JK2 942 aa12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 CENPHQ9H3R5 247 aa12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 DDX21Q9NR30 783 aaKnown RBP eCLIP12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 SLC4A4Q9Y6R1 1079 aa12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 CD163L1Q9NR16 1453 aa12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 DCAF8L1A6NGE4 600 aa12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 ZFYP08048 801 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 LMOD1P29536 600 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 EDC3Q96F86 508 aaKnown RBP12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 FAM89AQ96GI7 184 aa12.42□□□□□ -0.42
PCDHGA1-202ENST00000517417 A0A1B0GVL5 298 aa12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 HOXB7P09629 217 aa12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 CASQ1P31415 396 aa12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 FAM193AP78312 1265 aa12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 PDE4BQ07343 736 aa12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 WTAPQ15007 396 aa12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 DZIP3Q86Y13 1208 aaKnown RBP12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 EAF2Q96CJ1 260 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 NDUFB9Q9Y6M9 179 aa12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 MARCKSP29966 332 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 DHX32Q7L7V1 743 aaKnown RBP12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 CACTINQ8WUQ7 758 aaKnown RBP12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 GTF3C6Q969F1 213 aa12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 TIGD1Q96MW7 591 aa12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 ALG1Q9BT22 464 aa12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 IGSF1Q8N6C5 1336 aa12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 BAG3O95817 575 aa12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 UBA7P41226 1012 aa12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 MAP4K1Q92918 833 aa12.41□□□□□ -0.42
PCDHGA1-202ENST00000517417 KCNF1Q9H3M0 494 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms