RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 NLGN1Q8N2Q7 840 aa14.31□□□□□ -0.12
LMNA-224ENST00000515711 HELBQ8NG08 1087 aaPredicted RBP14.31□□□□□ -0.12
LMNA-224ENST00000515711 GRAPLQ8TC17 118 aaPredicted RBP14.31□□□□□ -0.12
LMNA-224ENST00000515711 APPBP2Q92624 585 aa14.31□□□□□ -0.12
LMNA-224ENST00000515711 NMRK2Q9NPI5 230 aa14.31□□□□□ -0.12
LMNA-224ENST00000515711 CHMP5Q9NZZ3 219 aa14.31□□□□□ -0.12
LMNA-224ENST00000515711 MINPP1Q9UNW1 487 aa14.31□□□□□ -0.12
LMNA-224ENST00000515711 ZNF804BA4D1E1 1349 aa14.31□□□□□ -0.12
LMNA-224ENST00000515711 SEMA3EO15041 775 aa14.3□□□□□ -0.12
LMNA-224ENST00000515711 SCARF1Q14162 830 aa14.3□□□□□ -0.12
LMNA-224ENST00000515711 TSGA10IPQ3SY00 556 aa14.3□□□□□ -0.12
LMNA-224ENST00000515711 CAVIN4Q5BKX8 364 aa14.3□□□□□ -0.12
LMNA-224ENST00000515711 CREB3L3Q68CJ9 461 aa14.3□□□□□ -0.12
LMNA-224ENST00000515711 PRPF40BQ6NWY9 871 aaKnown RBP14.3□□□□□ -0.12
LMNA-224ENST00000515711 COL23A1Q86Y22 540 aaPredicted RBP14.3□□□□□ -0.12
LMNA-224ENST00000515711 SPATA5Q8NB90 893 aa14.3□□□□□ -0.12
LMNA-224ENST00000515711 RPGRQ92834 1020 aaKnown RBP14.3□□□□□ -0.12
LMNA-224ENST00000515711 CELF1Q92879 486 aaKnown RBP14.3□□□□□ -0.12
LMNA-224ENST00000515711 SLKQ9H2G2 1235 aaPredicted RBP14.3□□□□□ -0.12
LMNA-224ENST00000515711 CD2APQ9Y5K6 639 aa14.3□□□□□ -0.12
LMNA-224ENST00000515711 MAST3O60307 1309 aa14.3□□□□□ -0.12
LMNA-224ENST00000515711 PDS5AQ29RF7 1337 aaKnown RBP14.3□□□□□ -0.12
LMNA-224ENST00000515711 RPAP1Q9BWH6 1393 aaPredicted RBP14.3□□□□□ -0.12
LMNA-224ENST00000515711 POLRMTO00411 1230 aaKnown RBP14.29□□□□□ -0.12
LMNA-224ENST00000515711 UBE3CQ15386 1083 aa14.29□□□□□ -0.12
LMNA-224ENST00000515711 CRY2Q49AN0 593 aa14.29□□□□□ -0.12
LMNA-224ENST00000515711 TMC4Q7Z404 712 aa14.29□□□□□ -0.12
LMNA-224ENST00000515711 PCDH10Q9P2E7 1040 aa14.29□□□□□ -0.12
LMNA-224ENST00000515711 SLC27A2O14975 620 aa14.28□□□□□ -0.12
LMNA-224ENST00000515711 IGSF3O75054 1194 aa14.28□□□□□ -0.12
LMNA-224ENST00000515711 HSPA1AP0DMV8 641 aaKnown RBP14.28□□□□□ -0.12
LMNA-224ENST00000515711 HSPA1BP0DMV9 641 aaKnown RBP14.28□□□□□ -0.12
LMNA-224ENST00000515711 ADD2P35612 726 aa14.28□□□□□ -0.12
LMNA-224ENST00000515711 MAP3K12Q12852 859 aa14.28□□□□□ -0.12
LMNA-224ENST00000515711 RASGRF1Q13972 1273 aa14.28□□□□□ -0.12
LMNA-224ENST00000515711 RBM17Q96I25 401 aaKnown RBP14.28□□□□□ -0.12
LMNA-224ENST00000515711 CWC22Q9HCG8 908 aaKnown RBP14.28□□□□□ -0.12
LMNA-224ENST00000515711 CYP46A1Q9Y6A2 500 aa14.28□□□□□ -0.12
LMNA-224ENST00000515711 COL11A2P13942 1736 aaPredicted RBP14.27□□□□□ -0.12
LMNA-224ENST00000515711 LTBP1Q14766 1721 aa14.27□□□□□ -0.12
LMNA-224ENST00000515711 CYP2E1P05181 493 aaPredicted RBP14.27□□□□□ -0.13
LMNA-224ENST00000515711 CASTP20810 708 aaKnown RBP14.27□□□□□ -0.13
LMNA-224ENST00000515711 DDIT3P35638 169 aa14.27□□□□□ -0.13
LMNA-224ENST00000515711 WASHC4Q2M389 1173 aa14.27□□□□□ -0.13
LMNA-224ENST00000515711 VPS53Q5VIR6 699 aa14.27□□□□□ -0.13
LMNA-224ENST00000515711 TMED8Q6PL24 325 aaPredicted RBP14.27□□□□□ -0.13
LMNA-224ENST00000515711 JAKMIP1Q96N16 626 aaKnown RBP14.27□□□□□ -0.13
LMNA-224ENST00000515711 CTNNA3Q9UI47 895 aa14.27□□□□□ -0.13
LMNA-224ENST00000515711 DENND2AQ9ULE3 1009 aa14.27□□□□□ -0.13
LMNA-224ENST00000515711 DDR1Q08345 913 aa14.26□□□□□ -0.13
LMNA-224ENST00000515711 ANKRD1Q15327 319 aa14.26□□□□□ -0.13
LMNA-224ENST00000515711 PI16Q6UXB8 463 aa14.26□□□□□ -0.13
LMNA-224ENST00000515711 VPS37DQ86XT2 251 aa14.26□□□□□ -0.13
LMNA-224ENST00000515711 RASEFQ8IZ41 740 aa14.26□□□□□ -0.13
LMNA-224ENST00000515711 INTS4Q96HW7 963 aaKnown RBP14.26□□□□□ -0.13
LMNA-224ENST00000515711 TTC14Q96N46 770 aa14.26□□□□□ -0.13
LMNA-224ENST00000515711 SEC62Q99442 399 aaKnown RBP14.26□□□□□ -0.13
LMNA-224ENST00000515711 UPF3BQ9BZI7 483 aaKnown RBP14.26□□□□□ -0.13
LMNA-224ENST00000515711 ZSWIM6Q9HCJ5 1215 aa14.26□□□□□ -0.13
LMNA-224ENST00000515711 LEMD3Q9Y2U8 911 aa14.26□□□□□ -0.13
LMNA-224ENST00000515711 CACNA1SQ13698 1873 aa14.25□□□□□ -0.13
LMNA-224ENST00000515711 XDHP47989 1333 aa14.25□□□□□ -0.13
LMNA-224ENST00000515711 KLRG2A4D1S0 409 aaPredicted RBP14.25□□□□□ -0.13
LMNA-224ENST00000515711 M0R2C6 588 aa14.25□□□□□ -0.13
LMNA-224ENST00000515711 IDH1O75874 414 aaKnown RBP14.25□□□□□ -0.13
LMNA-224ENST00000515711 HMGB1P09429 215 aaKnown RBP14.25□□□□□ -0.13
LMNA-224ENST00000515711 HSPD1P10809 573 aaKnown RBP14.25□□□□□ -0.13
LMNA-224ENST00000515711 PDE6AP16499 860 aa14.25□□□□□ -0.13
LMNA-224ENST00000515711 HOXA10P31260 410 aaPredicted RBP14.25□□□□□ -0.13
LMNA-224ENST00000515711 CUL4AQ13619 759 aa14.25□□□□□ -0.13
LMNA-224ENST00000515711 SLC9C2Q5TAH2 1124 aa14.25□□□□□ -0.13
LMNA-224ENST00000515711 BLOC1S2Q6QNY1 142 aa14.25□□□□□ -0.13
LMNA-224ENST00000515711 CCDC129Q6ZRS4 1044 aa14.25□□□□□ -0.13
LMNA-224ENST00000515711 RUFY3Q7L099 469 aa14.25□□□□□ -0.13
LMNA-224ENST00000515711 RBM46Q8TBY0 533 aaKnown RBP14.25□□□□□ -0.13
LMNA-224ENST00000515711 OSBP2Q969R2 916 aa14.25□□□□□ -0.13
LMNA-224ENST00000515711 TMX3Q96JJ7 454 aa14.25□□□□□ -0.13
LMNA-224ENST00000515711 CRAMP1Q96RY5 1269 aa14.25□□□□□ -0.13
LMNA-224ENST00000515711 ALDH8A1Q9H2A2 487 aaPredicted RBP14.25□□□□□ -0.13
LMNA-224ENST00000515711 PIH1D3Q9NQM4 214 aaKnown RBP14.25□□□□□ -0.13
LMNA-224ENST00000515711 TIAM2Q8IVF5 1701 aa14.24□□□□□ -0.13
LMNA-224ENST00000515711 ZMYM6O95789 1325 aa14.24□□□□□ -0.13
LMNA-224ENST00000515711 BCAMP50895 628 aa14.24□□□□□ -0.13
LMNA-224ENST00000515711 C15orf52Q6ZUT6 534 aaKnown RBP14.24□□□□□ -0.13
LMNA-224ENST00000515711 CCDC24Q8N4L8 307 aa14.24□□□□□ -0.13
LMNA-224ENST00000515711 SPRYD3Q8NCJ5 442 aa14.24□□□□□ -0.13
LMNA-224ENST00000515711 ZSCAN31Q96LW9 406 aaPredicted RBP14.24□□□□□ -0.13
LMNA-224ENST00000515711 BRIP1Q9BX63 1249 aa14.24□□□□□ -0.13
LMNA-224ENST00000515711 PDRG1Q9NUG6 133 aa14.24□□□□□ -0.13
LMNA-224ENST00000515711 PARP3Q9Y6F1 533 aa14.24□□□□□ -0.13
LMNA-224ENST00000515711 GPAA1O43292 621 aa14.23□□□□□ -0.13
LMNA-224ENST00000515711 BBOX1O75936 387 aa14.23□□□□□ -0.13
LMNA-224ENST00000515711 FBXO33Q7Z6M2 555 aa14.23□□□□□ -0.13
LMNA-224ENST00000515711 SH2B1Q9NRF2 756 aaPredicted RBP14.23□□□□□ -0.13
LMNA-224ENST00000515711 LIMCH1Q9UPQ0 1083 aa14.23□□□□□ -0.13
LMNA-224ENST00000515711 DLEC1Q9Y238 1755 aa14.23□□□□□ -0.13
LMNA-224ENST00000515711 COL1A1P02452 1464 aaPredicted RBP14.23□□□□□ -0.13
LMNA-224ENST00000515711 LAMB1P07942 1786 aa14.22□□□□□ -0.13
LMNA-224ENST00000515711 ZNF532Q9HCE3 1301 aa14.22□□□□□ -0.13
LMNA-224ENST00000515711 TCRBV5S4A2TA0A5A2 114 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms